Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_H02
(507 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 300 4e-82
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 300 4e-82
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 299 1e-81
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 299 1e-81
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 299 1e-81
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 297 3e-81
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 194 2e-50
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 194 2e-50
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 155 1e-38
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 155 2e-38
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 151 2e-37
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 151 3e-37
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 151 3e-37
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 150 7e-37
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 150 7e-37
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 150 7e-37
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 150 7e-37
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 149 9e-37
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 149 1e-36
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 149 1e-36
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 147 3e-36
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 142 1e-34
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 142 1e-34
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 141 3e-34
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 118 3e-27
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 118 3e-27
AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical ... 29 2.6
Z99281-31|CAI79273.1| 160|Caenorhabditis elegans Hypothetical p... 27 7.8
AF036704-2|ABA00183.1| 281|Caenorhabditis elegans Hypothetical ... 27 7.8
AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical ... 27 7.8
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 300 bits (736), Expect = 4e-82
Identities = 138/166 (83%), Positives = 145/166 (87%)
Frame = +1
Query: 10 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 189
VPRA+LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDV
Sbjct: 60 VPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDV 119
Query: 190 VRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTV 369
VRKEAE CDCLQGFQ KIREEYPDRIM+++SVVPSPKVSDTV
Sbjct: 120 VRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDTV 179
Query: 370 VEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDL 507
VEPYNATLSVHQLVENTDET+CIDNEALYDICFRTLKLS PTYGDL
Sbjct: 180 VEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLSNPTYGDL 225
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 300 bits (736), Expect = 4e-82
Identities = 139/166 (83%), Positives = 145/166 (87%)
Frame = +1
Query: 10 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 189
VPRA LVDLEPGTMDSVR+GPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDV
Sbjct: 60 VPRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDV 119
Query: 190 VRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTV 369
VRKEAESCDCLQGFQ KIREEYPDRIM T+SVVPSPKVSDTV
Sbjct: 120 VRKEAESCDCLQGFQMTHSLGGGTGSGMGTLLISKIREEYPDRIMMTFSVVPSPKVSDTV 179
Query: 370 VEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDL 507
VEPYNATLSVHQLVENTDET+CIDNEALYDICFRTLKL+TPTYGDL
Sbjct: 180 VEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDL 225
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 299 bits (733), Expect = 1e-81
Identities = 136/166 (81%), Positives = 145/166 (87%)
Frame = +1
Query: 10 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 189
VPRA+LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDV
Sbjct: 60 VPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDV 119
Query: 190 VRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTV 369
+RKEAE CDCLQGFQ KIREEYPDRIM+++SVVPSPKVSDTV
Sbjct: 120 IRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDTV 179
Query: 370 VEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDL 507
VEPYNATLSVHQLVENTDETYCIDNEALYDIC+RTLKL+ PTYGDL
Sbjct: 180 VEPYNATLSVHQLVENTDETYCIDNEALYDICYRTLKLTNPTYGDL 225
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 299 bits (733), Expect = 1e-81
Identities = 138/166 (83%), Positives = 145/166 (87%)
Frame = +1
Query: 10 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 189
VPRA+LVDLEPGTMDSVRSGPFGQ+FRPDN+VFGQSGAGNNWAKGHYTEGAELVD+VLDV
Sbjct: 60 VPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDV 119
Query: 190 VRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTV 369
VRKEAES DCLQGFQ KIREEYPDRIMNT+SVVPSPKVSDTV
Sbjct: 120 VRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTV 179
Query: 370 VEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDL 507
VEPYNATLSVHQLVENTD T+CIDNEALYDICFRTLKL+TPTYGDL
Sbjct: 180 VEPYNATLSVHQLVENTDSTFCIDNEALYDICFRTLKLTTPTYGDL 225
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 299 bits (733), Expect = 1e-81
Identities = 138/166 (83%), Positives = 145/166 (87%)
Frame = +1
Query: 10 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 189
VPRA+LVDLEPGTMDSVRSGPFGQ+FRPDN+VFGQSGAGNNWAKGHYTEGAELVD+VLDV
Sbjct: 60 VPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDV 119
Query: 190 VRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTV 369
VRKEAES DCLQGFQ KIREEYPDRIMNT+SVVPSPKVSDTV
Sbjct: 120 VRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTV 179
Query: 370 VEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDL 507
VEPYNATLSVHQLVENTD T+CIDNEALYDICFRTLKL+TPTYGDL
Sbjct: 180 VEPYNATLSVHQLVENTDSTFCIDNEALYDICFRTLKLTTPTYGDL 225
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 297 bits (729), Expect = 3e-81
Identities = 135/166 (81%), Positives = 145/166 (87%)
Frame = +1
Query: 10 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 189
VPRA+LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDV
Sbjct: 60 VPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDV 119
Query: 190 VRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTV 369
+RKEAE CDCLQGFQ KIREE+PDRIM+++SVVPSPKVSDTV
Sbjct: 120 IRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMSSFSVVPSPKVSDTV 179
Query: 370 VEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDL 507
VEPYNATLSVHQLVENTDETYCIDNEALYDIC+RTLKL+ PTYGDL
Sbjct: 180 VEPYNATLSVHQLVENTDETYCIDNEALYDICYRTLKLTNPTYGDL 225
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 194 bits (474), Expect = 2e-50
Identities = 90/167 (53%), Positives = 121/167 (72%), Gaps = 1/167 (0%)
Frame = +1
Query: 10 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 189
VPRAILVDL+P +++ VRS +G++F P+N V G+SGAGNNW++G+Y +GAE+VD VL V
Sbjct: 60 VPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSV 119
Query: 190 VRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTV 369
+R+EAE+ D L+GFQ K+REEY D+ ++T S++PS KVSDTV
Sbjct: 120 IRREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPSAKVSDTV 179
Query: 370 VEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKL-STPTYGDL 507
VEPYNA LS+ L++N DE +CIDNEA++DIC LKL + TYGDL
Sbjct: 180 VEPYNAILSMPHLMDNCDENFCIDNEAIFDICQYNLKLENRVTYGDL 226
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 194 bits (474), Expect = 2e-50
Identities = 90/167 (53%), Positives = 121/167 (72%), Gaps = 1/167 (0%)
Frame = +1
Query: 10 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 189
VPRAILVDL+P +++ VRS +G++F P+N V G+SGAGNNW++G+Y +GAE+VD VL V
Sbjct: 60 VPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSV 119
Query: 190 VRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTV 369
+R+EAE+ D L+GFQ K+REEY D+ ++T S++PS KVSDTV
Sbjct: 120 IRREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPSAKVSDTV 179
Query: 370 VEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKL-STPTYGDL 507
VEPYNA LS+ L++N DE +CIDNEA++DIC LKL + TYGDL
Sbjct: 180 VEPYNAILSMPHLMDNCDENFCIDNEAIFDICQYNLKLENRVTYGDL 226
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 155 bits (377), Expect = 1e-38
Identities = 67/168 (39%), Positives = 107/168 (63%)
Frame = +1
Query: 4 RGVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 183
R VPR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G E++D+ L
Sbjct: 57 RHVPRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTL 116
Query: 184 DVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSD 363
D +R+ A +C+ LQGF ++ EY + +S+ P+P++S
Sbjct: 117 DRIRRLANNCEGLQGFFVFHSFGGGTGSGFTSMLMERLSAEYGKKSKLEFSIYPAPQIST 176
Query: 364 TVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDL 507
+VVEPYN+ L+ H +E++D ++ +DNEA+YDIC R L++S PTY +L
Sbjct: 177 SVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLRVSRPTYNNL 224
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 155 bits (375), Expect = 2e-38
Identities = 69/166 (41%), Positives = 104/166 (62%)
Frame = +1
Query: 10 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 189
VPRAI VDLEP +D +R+G +G +F PD + G+ A NN+A+GHYT G EL+D VLD
Sbjct: 65 VPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDR 124
Query: 190 VRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTV 369
+RK+ E+C+ LQGF ++ E+ + +SV P+P+VS +V
Sbjct: 125 IRKQTENCEGLQGFLVFHSFGGGTGSGFSSLLMERLSVEFGKKSKLEFSVYPAPQVSTSV 184
Query: 370 VEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDL 507
VEPYN+ L+ H +E +D ++ +DNEA+YD+C + L + P+Y +L
Sbjct: 185 VEPYNSILTTHTTLELSDCSFMVDNEAIYDLCRQKLHVERPSYSNL 230
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 151 bits (367), Expect = 2e-37
Identities = 67/168 (39%), Positives = 104/168 (61%)
Frame = +1
Query: 4 RGVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 183
R VPR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VL
Sbjct: 58 RYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVL 117
Query: 184 DVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSD 363
D +R+ A++C LQGF ++ +Y + +S+ P+P+VS
Sbjct: 118 DRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVST 177
Query: 364 TVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDL 507
VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + P+Y +L
Sbjct: 178 AVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLSVDRPSYTNL 225
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 151 bits (366), Expect = 3e-37
Identities = 67/168 (39%), Positives = 104/168 (61%)
Frame = +1
Query: 4 RGVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 183
R VPR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VL
Sbjct: 58 RYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVL 117
Query: 184 DVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSD 363
D +R+ A++C LQGF ++ +Y + +S+ P+P+VS
Sbjct: 118 DRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVST 177
Query: 364 TVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDL 507
VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + P+Y +L
Sbjct: 178 AVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDVERPSYTNL 225
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 151 bits (366), Expect = 3e-37
Identities = 67/168 (39%), Positives = 104/168 (61%)
Frame = +1
Query: 4 RGVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 183
R VPR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VL
Sbjct: 58 RYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVL 117
Query: 184 DVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSD 363
D +R+ A++C LQGF ++ +Y + +S+ P+P+VS
Sbjct: 118 DRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVST 177
Query: 364 TVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDL 507
VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + P+Y +L
Sbjct: 178 AVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDVERPSYTNL 225
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 150 bits (363), Expect = 7e-37
Identities = 65/168 (38%), Positives = 103/168 (61%)
Frame = +1
Query: 4 RGVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 183
R VPRA++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D L
Sbjct: 60 RHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTL 119
Query: 184 DVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSD 363
D +R+ A++C LQGF ++ +Y + +S+ P+P+VS
Sbjct: 120 DRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVST 179
Query: 364 TVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDL 507
VVEPYN+ L+ H +E++D ++ +DNEA+YDIC R L + P+Y +L
Sbjct: 180 AVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIERPSYTNL 227
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 150 bits (363), Expect = 7e-37
Identities = 65/168 (38%), Positives = 103/168 (61%)
Frame = +1
Query: 4 RGVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 183
R VPRA++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D L
Sbjct: 59 RHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTL 118
Query: 184 DVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSD 363
D +R+ A++C LQGF ++ +Y + +S+ P+P+VS
Sbjct: 119 DRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVST 178
Query: 364 TVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDL 507
VVEPYN+ L+ H +E++D ++ +DNEA+YDIC R L + P+Y +L
Sbjct: 179 AVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIERPSYTNL 226
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 150 bits (363), Expect = 7e-37
Identities = 65/168 (38%), Positives = 103/168 (61%)
Frame = +1
Query: 4 RGVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 183
R VPRA++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D L
Sbjct: 60 RHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTL 119
Query: 184 DVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSD 363
D +R+ A++C LQGF ++ +Y + +S+ P+P+VS
Sbjct: 120 DRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVST 179
Query: 364 TVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDL 507
VVEPYN+ L+ H +E++D ++ +DNEA+YDIC R L + P+Y +L
Sbjct: 180 AVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIERPSYTNL 227
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 150 bits (363), Expect = 7e-37
Identities = 65/168 (38%), Positives = 103/168 (61%)
Frame = +1
Query: 4 RGVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 183
R VPRA++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D L
Sbjct: 60 RHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTL 119
Query: 184 DVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSD 363
D +R+ A++C LQGF ++ +Y + +S+ P+P+VS
Sbjct: 120 DRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVST 179
Query: 364 TVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDL 507
VVEPYN+ L+ H +E++D ++ +DNEA+YDIC R L + P+Y +L
Sbjct: 180 AVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIERPSYTNL 227
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 149 bits (362), Expect = 9e-37
Identities = 66/168 (39%), Positives = 103/168 (61%)
Frame = +1
Query: 4 RGVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 183
R VPR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VL
Sbjct: 58 RYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVL 117
Query: 184 DVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSD 363
D +R+ A++C LQGF ++ +Y + +S+ P+P+V
Sbjct: 118 DRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVCT 177
Query: 364 TVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDL 507
VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + P+Y +L
Sbjct: 178 AVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLSVDRPSYTNL 225
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 149 bits (361), Expect = 1e-36
Identities = 66/168 (39%), Positives = 103/168 (61%)
Frame = +1
Query: 4 RGVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 183
R VPR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+ L
Sbjct: 58 RYVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTL 117
Query: 184 DVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSD 363
D +R+ A++C LQGF ++ +Y + +S+ P+P+VS
Sbjct: 118 DRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVST 177
Query: 364 TVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDL 507
VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + P+Y +L
Sbjct: 178 AVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICKRNLDVDRPSYTNL 225
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 149 bits (361), Expect = 1e-36
Identities = 66/168 (39%), Positives = 103/168 (61%)
Frame = +1
Query: 4 RGVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 183
R VPR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+ L
Sbjct: 58 RYVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTL 117
Query: 184 DVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSD 363
D +R+ A++C LQGF ++ +Y + +S+ P+P+VS
Sbjct: 118 DRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVST 177
Query: 364 TVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDL 507
VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + P+Y +L
Sbjct: 178 AVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICKRNLDVDRPSYTNL 225
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 147 bits (357), Expect = 3e-36
Identities = 66/166 (39%), Positives = 103/166 (62%)
Frame = +1
Query: 10 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 189
VPRAI+VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D V+D
Sbjct: 67 VPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVVMDR 126
Query: 190 VRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTV 369
VR+ E+C LQGF ++ +Y + + + P+P+VS ++
Sbjct: 127 VRRLVENCRGLQGFLVFHSFGGGTGSGFTALLMERLSVDYGKKSKLEFCIYPAPQVSTSM 186
Query: 370 VEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDL 507
VEPYN+ L+ H +E++D ++ +DNEA+YDIC R L L+ PTY +L
Sbjct: 187 VEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDLARPTYTNL 232
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 142 bits (345), Expect = 1e-34
Identities = 65/166 (39%), Positives = 101/166 (60%)
Frame = +1
Query: 10 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 189
VPR + VDLEP +D VR+G + +F P+ + G+ A N +A+G YT G E++D V+D
Sbjct: 68 VPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDR 127
Query: 190 VRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTV 369
V++ AE+C+ LQGF ++ EY + +++ P+P+VS ++
Sbjct: 128 VKRLAENCNGLQGFVIFHSFGGGTGSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTSM 187
Query: 370 VEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDL 507
VEPYN+ L H +E++D T+ +DNEA+YDIC R L L+ PTY +L
Sbjct: 188 VEPYNSILMTHTTLEHSDCTFMVDNEAIYDICRRNLDLARPTYTNL 233
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 142 bits (345), Expect = 1e-34
Identities = 65/166 (39%), Positives = 101/166 (60%)
Frame = +1
Query: 10 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 189
VPR + VDLEP +D VR+G + +F P+ + G+ A N +A+G YT G E++D V+D
Sbjct: 40 VPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDR 99
Query: 190 VRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTV 369
V++ AE+C+ LQGF ++ EY + +++ P+P+VS ++
Sbjct: 100 VKRLAENCNGLQGFVIFHSFGGGTGSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTSM 159
Query: 370 VEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDL 507
VEPYN+ L H +E++D T+ +DNEA+YDIC R L L+ PTY +L
Sbjct: 160 VEPYNSILMTHTTLEHSDCTFMVDNEAIYDICRRNLDLARPTYTNL 205
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 141 bits (341), Expect = 3e-34
Identities = 64/166 (38%), Positives = 100/166 (60%)
Frame = +1
Query: 10 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 189
VPRAI VDLEP +D VR+G + ++F P+ + G+ A NN+A+GHYT G EL+D V+D
Sbjct: 62 VPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMDR 121
Query: 190 VRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTV 369
VR+ E C LQGF ++ +Y + +S+ P+P++S ++
Sbjct: 122 VRRLTERCQSLQGFLIFHSFGGGTGSGFTSLVMERLSIDYGKKAKLEFSIYPAPQISTSM 181
Query: 370 VEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDL 507
VEPYN+ L+ H +E++D ++ +DNEA+Y+I L + +PTY L
Sbjct: 182 VEPYNSLLTTHTTLEHSDCSFIMDNEAIYEITKVNLGVRSPTYTHL 227
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 118 bits (283), Expect = 3e-27
Identities = 60/167 (35%), Positives = 89/167 (53%), Gaps = 4/167 (2%)
Frame = +1
Query: 10 VPRAILVDLEPGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSV 180
VPRA+LVDLEP ++ + P F +F DN GAGNNWA G Y +G E+ + +
Sbjct: 62 VPRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKI 120
Query: 181 LDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVS 360
+D++ +EAE+ + L G ++RE +P +++ TYSV + S
Sbjct: 121 MDIIIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTYSVFANSDTS 180
Query: 361 -DTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTY 498
D VV PYN LS+ +L+EN D +DN AL+ + K TPT+
Sbjct: 181 TDVVVHPYNWVLSMQRLIENPDHVVVLDNAALHRLAAGKFKTDTPTF 227
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 118 bits (283), Expect = 3e-27
Identities = 60/167 (35%), Positives = 89/167 (53%), Gaps = 4/167 (2%)
Frame = +1
Query: 10 VPRAILVDLEPGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSV 180
VPRA+LVDLEP ++ + P F +F DN GAGNNWA G Y +G E+ + +
Sbjct: 62 VPRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKI 120
Query: 181 LDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVS 360
+D++ +EAE+ + L G ++RE +P +++ TYSV + S
Sbjct: 121 MDIIIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTYSVFANSDTS 180
Query: 361 -DTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTY 498
D VV PYN LS+ +L+EN D +DN AL+ + K TPT+
Sbjct: 181 TDVVVHPYNWVLSMQRLIENPDHVVVLDNAALHRLAAGKFKTDTPTF 227
>AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical
protein F56E10.2 protein.
Length = 813
Score = 28.7 bits (61), Expect = 2.6
Identities = 22/68 (32%), Positives = 28/68 (41%), Gaps = 5/68 (7%)
Frame = -2
Query: 215 SHDSASLRTTSKTESTSSAPSV*CPLAQLL-----PAPDCPKTKLSGRKICPKGPERTES 51
S A R + + S SS+PS CP LL PAP P + G PK +
Sbjct: 294 SDGRAGSRISLASTSASSSPSDPCPSPPLLPPVCPPAPPPPPPPIGGLTSPPKDALKNVP 353
Query: 50 MVPGSRST 27
PG+ T
Sbjct: 354 EPPGNMKT 361
>Z99281-31|CAI79273.1| 160|Caenorhabditis elegans Hypothetical
protein Y57G11C.51 protein.
Length = 160
Score = 27.1 bits (57), Expect = 7.8
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 68 DPSDRSSAPTTSFSDSPAPVTTGLRDTTRK 157
DPS SS+ ++S S SP+ +T L T R+
Sbjct: 123 DPSTPSSSTSSSTSSSPSSSSTPLTSTQRR 152
>AF036704-2|ABA00183.1| 281|Caenorhabditis elegans Hypothetical
protein ZK185.4 protein.
Length = 281
Score = 27.1 bits (57), Expect = 7.8
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +3
Query: 216 LFTRIPTHTLPRRRYWLRYGHPSHL*NTRRIPRQNHEHI 332
+F IP L W+RYG NT R+ + H H+
Sbjct: 87 IFFHIPFRLLELSVGWVRYGRLESRANTHRLWYKMHRHL 125
>AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical
protein H43E16.1 protein.
Length = 1203
Score = 27.1 bits (57), Expect = 7.8
Identities = 15/65 (23%), Positives = 31/65 (47%)
Frame = -2
Query: 230 NPCKQSHDSASLRTTSKTESTSSAPSV*CPLAQLLPAPDCPKTKLSGRKICPKGPERTES 51
NP + S+S +T + T++T +PS ++Q P T ++ + + + + +
Sbjct: 390 NPTTTAQLSSSSKTLTSTQTTQGSPST---VSQTTPGVSSASTGMTTSQASLRSTQNSVT 446
Query: 50 MVPGS 36
PGS
Sbjct: 447 STPGS 451
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.136 0.410
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,594,054
Number of Sequences: 27780
Number of extensions: 250263
Number of successful extensions: 811
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 742
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 789
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 977860456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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