Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_G23
         (433 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    25   0.48 
AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding prote...    24   0.63 
AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding pro...    24   0.63 
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    21   5.9  

>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 24.6 bits (51), Expect = 0.48
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -1

Query: 172  PATSNVIKDRIYADLVCFQPKKKDF 98
            PA  +  ++R+Y   VC+ P  +DF
Sbjct: 1055 PACFDSDRERLYDCYVCYSPNDEDF 1079


>AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding protein
           ASP1 protein.
          Length = 144

 Score = 24.2 bits (50), Expect = 0.63
 Identities = 13/52 (25%), Positives = 25/52 (48%)
 Frame = -1

Query: 241 EVSLSNLTQQLNCRLRSITSKKHPATSNVIKDRIYADLVCFQPKKKDFFYLL 86
           ++ L  L  QL  R +S+  K  P + +   ++IY    C Q    D ++++
Sbjct: 93  DIMLGLLPDQLQERAQSVMGKCLPTSGSDNCNKIYNLAKCVQESAPDVWFVI 144


>AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding
           protein ASP1 protein.
          Length = 144

 Score = 24.2 bits (50), Expect = 0.63
 Identities = 13/52 (25%), Positives = 25/52 (48%)
 Frame = -1

Query: 241 EVSLSNLTQQLNCRLRSITSKKHPATSNVIKDRIYADLVCFQPKKKDFFYLL 86
           ++ L  L  QL  R +S+  K  P + +   ++IY    C Q    D ++++
Sbjct: 93  DIMLGLLPDQLQERAQSVMGKCLPTSGSDNCNKIYNLAKCVQESAPDVWFVI 144


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = +3

Query: 177 FFEVILLRRQFNCWVRFERETSRWGVAYRHFQ-LHEREE 290
           FF  +  RR+F    R  R+ +    +Y  FQ L ER E
Sbjct: 275 FFHPLSSRREFAVSTRILRDENLSQNSYHEFQILPERGE 313


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,521
Number of Sequences: 438
Number of extensions: 2722
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11244597
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)