Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_G20
(481 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L05093-1|AAC18781.1| 176|Homo sapiens ribosomal protein L18a pr... 213 3e-55
BC071920-1|AAH71920.1| 176|Homo sapiens ribosomal protein L18a ... 213 3e-55
BC066319-1|AAH66319.1| 176|Homo sapiens ribosomal protein L18a ... 213 3e-55
BC007512-1|AAH07512.1| 176|Homo sapiens ribosomal protein L18a ... 213 3e-55
AK222647-1|BAD96367.1| 176|Homo sapiens ribosomal protein L18a ... 213 3e-55
AC005796-1|AAC62828.1| 176|Homo sapiens ribosomal protein L18a ... 213 3e-55
X80822-1|CAA56788.1| 140|Homo sapiens protein ( H.sapiens mRNA ... 171 8e-43
AY779046-1|AAX47571.1| 136|Homo sapiens ribosomal protein L18a-... 156 4e-38
AB007175-1|BAA28596.1| 66|Homo sapiens ribosomal protein L18a ... 95 2e-19
BC031010-1|AAH31010.1| 428|Homo sapiens SMYD3 protein protein. 29 8.5
BC017079-1|AAH17079.2| 287|Homo sapiens SMYD3 protein protein. 29 8.5
AY186742-1|AAO31695.1| 258|Homo sapiens hypothetical protein FL... 29 8.5
AL512412-3|CAI14746.1| 428|Homo sapiens SET and MYND domain con... 29 8.5
AL512412-2|CAI14745.1| 258|Homo sapiens SET and MYND domain con... 29 8.5
AL512412-1|CAI14744.1| 239|Homo sapiens SET and MYND domain con... 29 8.5
AL445468-3|CAI16630.1| 428|Homo sapiens SET and MYND domain con... 29 8.5
AL445468-2|CAI16629.1| 258|Homo sapiens SET and MYND domain con... 29 8.5
AL445468-1|CAI16628.1| 239|Homo sapiens SET and MYND domain con... 29 8.5
AL358859-1|CAI15419.1| 428|Homo sapiens SET and MYND domain con... 29 8.5
AL356583-1|CAI16395.1| 428|Homo sapiens SET and MYND domain con... 29 8.5
AK024733-1|BAB14981.1| 369|Homo sapiens protein ( Homo sapiens ... 29 8.5
AB057595-1|BAB86333.1| 428|Homo sapiens histone methyltransfera... 29 8.5
>L05093-1|AAC18781.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 213 bits (520), Expect = 3e-55
Identities = 97/137 (70%), Positives = 113/137 (82%)
Frame = +3
Query: 9 AKSRFWYFLRQLKKFKKTTGEIVSIKEIPEKSPVKIKNFGIWLRYESRSGVHNMYREYRD 188
AKSRFWYF+ QLKK KK++GEIV ++ EKSP+++KNFGIWLRY+SRSG HNMYREYRD
Sbjct: 40 AKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRD 99
Query: 189 LSVGGAVTQCYRDMGARHRARAHSIQIIKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVH 368
L+ GAVTQCYRDMGARHRARAHSIQI+KVE I A+ CRRP VKQFH SKI FPLP RV
Sbjct: 100 LTTAGAVTQCYRDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVL 159
Query: 369 QYKRLNTFAYKRPSTYF 419
+ + F KRP+T+F
Sbjct: 160 RRQHKPRFTTKRPNTFF 176
>BC071920-1|AAH71920.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 213 bits (520), Expect = 3e-55
Identities = 97/137 (70%), Positives = 113/137 (82%)
Frame = +3
Query: 9 AKSRFWYFLRQLKKFKKTTGEIVSIKEIPEKSPVKIKNFGIWLRYESRSGVHNMYREYRD 188
AKSRFWYF+ QLKK KK++GEIV ++ EKSP+++KNFGIWLRY+SRSG HNMYREYRD
Sbjct: 40 AKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRD 99
Query: 189 LSVGGAVTQCYRDMGARHRARAHSIQIIKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVH 368
L+ GAVTQCYRDMGARHRARAHSIQI+KVE I A+ CRRP VKQFH SKI FPLP RV
Sbjct: 100 LTTAGAVTQCYRDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVL 159
Query: 369 QYKRLNTFAYKRPSTYF 419
+ + F KRP+T+F
Sbjct: 160 RRQHKPRFTTKRPNTFF 176
>BC066319-1|AAH66319.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 213 bits (520), Expect = 3e-55
Identities = 97/137 (70%), Positives = 113/137 (82%)
Frame = +3
Query: 9 AKSRFWYFLRQLKKFKKTTGEIVSIKEIPEKSPVKIKNFGIWLRYESRSGVHNMYREYRD 188
AKSRFWYF+ QLKK KK++GEIV ++ EKSP+++KNFGIWLRY+SRSG HNMYREYRD
Sbjct: 40 AKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRD 99
Query: 189 LSVGGAVTQCYRDMGARHRARAHSIQIIKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVH 368
L+ GAVTQCYRDMGARHRARAHSIQI+KVE I A+ CRRP VKQFH SKI FPLP RV
Sbjct: 100 LTTAGAVTQCYRDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVL 159
Query: 369 QYKRLNTFAYKRPSTYF 419
+ + F KRP+T+F
Sbjct: 160 RRQHKPRFTTKRPNTFF 176
>BC007512-1|AAH07512.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 213 bits (520), Expect = 3e-55
Identities = 97/137 (70%), Positives = 113/137 (82%)
Frame = +3
Query: 9 AKSRFWYFLRQLKKFKKTTGEIVSIKEIPEKSPVKIKNFGIWLRYESRSGVHNMYREYRD 188
AKSRFWYF+ QLKK KK++GEIV ++ EKSP+++KNFGIWLRY+SRSG HNMYREYRD
Sbjct: 40 AKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRD 99
Query: 189 LSVGGAVTQCYRDMGARHRARAHSIQIIKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVH 368
L+ GAVTQCYRDMGARHRARAHSIQI+KVE I A+ CRRP VKQFH SKI FPLP RV
Sbjct: 100 LTTAGAVTQCYRDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVL 159
Query: 369 QYKRLNTFAYKRPSTYF 419
+ + F KRP+T+F
Sbjct: 160 RRQHKPRFTTKRPNTFF 176
>AK222647-1|BAD96367.1| 176|Homo sapiens ribosomal protein L18a
variant protein.
Length = 176
Score = 213 bits (520), Expect = 3e-55
Identities = 97/137 (70%), Positives = 113/137 (82%)
Frame = +3
Query: 9 AKSRFWYFLRQLKKFKKTTGEIVSIKEIPEKSPVKIKNFGIWLRYESRSGVHNMYREYRD 188
AKSRFWYF+ QLKK KK++GEIV ++ EKSP+++KNFGIWLRY+SRSG HNMYREYRD
Sbjct: 40 AKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRD 99
Query: 189 LSVGGAVTQCYRDMGARHRARAHSIQIIKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVH 368
L+ GAVTQCYRDMGARHRARAHSIQI+KVE I A+ CRRP VKQFH SKI FPLP RV
Sbjct: 100 LTAAGAVTQCYRDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVL 159
Query: 369 QYKRLNTFAYKRPSTYF 419
+ + F KRP+T+F
Sbjct: 160 RRQHKPRFTTKRPNTFF 176
>AC005796-1|AAC62828.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 213 bits (520), Expect = 3e-55
Identities = 97/137 (70%), Positives = 113/137 (82%)
Frame = +3
Query: 9 AKSRFWYFLRQLKKFKKTTGEIVSIKEIPEKSPVKIKNFGIWLRYESRSGVHNMYREYRD 188
AKSRFWYF+ QLKK KK++GEIV ++ EKSP+++KNFGIWLRY+SRSG HNMYREYRD
Sbjct: 40 AKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRD 99
Query: 189 LSVGGAVTQCYRDMGARHRARAHSIQIIKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVH 368
L+ GAVTQCYRDMGARHRARAHSIQI+KVE I A+ CRRP VKQFH SKI FPLP RV
Sbjct: 100 LTTAGAVTQCYRDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVL 159
Query: 369 QYKRLNTFAYKRPSTYF 419
+ + F KRP+T+F
Sbjct: 160 RRQHKPRFTTKRPNTFF 176
>X80822-1|CAA56788.1| 140|Homo sapiens protein ( H.sapiens mRNA for
ORF. ).
Length = 140
Score = 171 bits (417), Expect = 8e-43
Identities = 77/111 (69%), Positives = 90/111 (81%)
Frame = +3
Query: 87 EIPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQ 266
++ EKSP+++KNFGIWL Y+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAHSIQ
Sbjct: 30 QVFEKSPLRVKNFGIWLSYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQ 89
Query: 267 IIKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRLNTFAYKRPSTYF 419
I+KVE I + CRRP VKQFH SKI FPLP RV + + F KRP+T+F
Sbjct: 90 IMKVEEIAVSKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 140
>AY779046-1|AAX47571.1| 136|Homo sapiens ribosomal protein
L18a-like protein protein.
Length = 136
Score = 156 bits (378), Expect = 4e-38
Identities = 70/96 (72%), Positives = 82/96 (85%)
Frame = +3
Query: 9 AKSRFWYFLRQLKKFKKTTGEIVSIKEIPEKSPVKIKNFGIWLRYESRSGVHNMYREYRD 188
AKSRFWYF+ QLKK KK++GE V ++ EKSP+++KNFGIWLR +SRSG HNMYREYRD
Sbjct: 40 AKSRFWYFVSQLKKMKKSSGETVYCGQVFEKSPLRVKNFGIWLRCDSRSGTHNMYREYRD 99
Query: 189 LSVGGAVTQCYRDMGARHRARAHSIQIIKVEVIKAA 296
L+ GAVTQCYRDMGARHRARAHSIQI+ VE I A+
Sbjct: 100 LTTAGAVTQCYRDMGARHRARAHSIQIMMVEEIAAS 135
>AB007175-1|BAA28596.1| 66|Homo sapiens ribosomal protein L18a
protein.
Length = 66
Score = 94.7 bits (225), Expect = 2e-19
Identities = 45/66 (68%), Positives = 51/66 (77%)
Frame = +3
Query: 222 RDMGARHRARAHSIQIIKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRLNTFAYK 401
RDMGARHRARAHSIQI+KVE I A+ CRRP VKQFH SKI FPLP RV + + F K
Sbjct: 1 RDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTK 60
Query: 402 RPSTYF 419
RP+T+F
Sbjct: 61 RPNTFF 66
>BC031010-1|AAH31010.1| 428|Homo sapiens SMYD3 protein protein.
Length = 428
Score = 29.1 bits (62), Expect = 8.5
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 153 SGVHNMYREYRDLSVGGAVTQCYRDM 230
+G H + R RD+ VG +T CY DM
Sbjct: 217 NGPHLLLRAVRDIEVGEELTICYLDM 242
>BC017079-1|AAH17079.2| 287|Homo sapiens SMYD3 protein protein.
Length = 287
Score = 29.1 bits (62), Expect = 8.5
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 153 SGVHNMYREYRDLSVGGAVTQCYRDM 230
+G H + R RD+ VG +T CY DM
Sbjct: 76 NGPHLLLRAVRDIEVGEELTICYLDM 101
>AY186742-1|AAO31695.1| 258|Homo sapiens hypothetical protein
FLJ21080 protein.
Length = 258
Score = 29.1 bits (62), Expect = 8.5
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 153 SGVHNMYREYRDLSVGGAVTQCYRDM 230
+G H + R RD+ VG +T CY DM
Sbjct: 47 NGPHLLLRAVRDIEVGEELTICYLDM 72
>AL512412-3|CAI14746.1| 428|Homo sapiens SET and MYND domain
containing 3 protein.
Length = 428
Score = 29.1 bits (62), Expect = 8.5
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 153 SGVHNMYREYRDLSVGGAVTQCYRDM 230
+G H + R RD+ VG +T CY DM
Sbjct: 217 NGPHLLLRAVRDIEVGEELTICYLDM 242
>AL512412-2|CAI14745.1| 258|Homo sapiens SET and MYND domain
containing 3 protein.
Length = 258
Score = 29.1 bits (62), Expect = 8.5
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 153 SGVHNMYREYRDLSVGGAVTQCYRDM 230
+G H + R RD+ VG +T CY DM
Sbjct: 47 NGPHLLLRAVRDIEVGEELTICYLDM 72
>AL512412-1|CAI14744.1| 239|Homo sapiens SET and MYND domain
containing 3 protein.
Length = 239
Score = 29.1 bits (62), Expect = 8.5
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 153 SGVHNMYREYRDLSVGGAVTQCYRDM 230
+G H + R RD+ VG +T CY DM
Sbjct: 28 NGPHLLLRAVRDIEVGEELTICYLDM 53
>AL445468-3|CAI16630.1| 428|Homo sapiens SET and MYND domain
containing 3 protein.
Length = 428
Score = 29.1 bits (62), Expect = 8.5
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 153 SGVHNMYREYRDLSVGGAVTQCYRDM 230
+G H + R RD+ VG +T CY DM
Sbjct: 217 NGPHLLLRAVRDIEVGEELTICYLDM 242
>AL445468-2|CAI16629.1| 258|Homo sapiens SET and MYND domain
containing 3 protein.
Length = 258
Score = 29.1 bits (62), Expect = 8.5
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 153 SGVHNMYREYRDLSVGGAVTQCYRDM 230
+G H + R RD+ VG +T CY DM
Sbjct: 47 NGPHLLLRAVRDIEVGEELTICYLDM 72
>AL445468-1|CAI16628.1| 239|Homo sapiens SET and MYND domain
containing 3 protein.
Length = 239
Score = 29.1 bits (62), Expect = 8.5
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 153 SGVHNMYREYRDLSVGGAVTQCYRDM 230
+G H + R RD+ VG +T CY DM
Sbjct: 28 NGPHLLLRAVRDIEVGEELTICYLDM 53
>AL358859-1|CAI15419.1| 428|Homo sapiens SET and MYND domain
containing 3 protein.
Length = 428
Score = 29.1 bits (62), Expect = 8.5
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 153 SGVHNMYREYRDLSVGGAVTQCYRDM 230
+G H + R RD+ VG +T CY DM
Sbjct: 217 NGPHLLLRAVRDIEVGEELTICYLDM 242
>AL356583-1|CAI16395.1| 428|Homo sapiens SET and MYND domain
containing 3 protein.
Length = 428
Score = 29.1 bits (62), Expect = 8.5
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 153 SGVHNMYREYRDLSVGGAVTQCYRDM 230
+G H + R RD+ VG +T CY DM
Sbjct: 217 NGPHLLLRAVRDIEVGEELTICYLDM 242
>AK024733-1|BAB14981.1| 369|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21080 fis, clone CAS02449. ).
Length = 369
Score = 29.1 bits (62), Expect = 8.5
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 153 SGVHNMYREYRDLSVGGAVTQCYRDM 230
+G H + R RD+ VG +T CY DM
Sbjct: 158 NGPHLLLRAVRDIEVGEELTICYLDM 183
>AB057595-1|BAB86333.1| 428|Homo sapiens histone methyltransferase
protein.
Length = 428
Score = 29.1 bits (62), Expect = 8.5
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 153 SGVHNMYREYRDLSVGGAVTQCYRDM 230
+G H + R RD+ VG +T CY DM
Sbjct: 217 NGPHLLLRAVRDIEVGEELTICYLDM 242
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,287,835
Number of Sequences: 237096
Number of extensions: 1434785
Number of successful extensions: 2948
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 2918
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2948
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4270724850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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