Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_G19
         (157 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC091522-1|AAH91522.1|  396|Homo sapiens Obg-like ATPase 1 protein.    29   3.6  
BC029376-1|AAH29376.1|  396|Homo sapiens Obg-like ATPase 1 protein.    29   3.6  
BC013925-1|AAH13925.1|  278|Homo sapiens GTPBP9 protein protein.       29   3.6  
BC012842-1|AAH12842.1|  396|Homo sapiens GTP-binding protein 9 (...    29   3.6  
AL136546-1|CAB66481.1|  396|Homo sapiens hypothetical protein pr...    29   3.6  
AK027523-1|BAB55174.1|  396|Homo sapiens protein ( Homo sapiens ...    29   3.6  
AF134478-1|AAP97255.1|  396|Homo sapiens GTP-binding protein pro...    29   3.6  
AC013467-1|AAY14779.1|  183|Homo sapiens unknown protein.              29   3.6  

>BC091522-1|AAH91522.1|  396|Homo sapiens Obg-like ATPase 1 protein.
          Length = 396

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 11/15 (73%), Positives = 14/15 (93%)
 Frame = +1

Query: 112 PLIGRVGTNLKVGIV 156
           P+IGR GT+LK+GIV
Sbjct: 14  PIIGRFGTSLKIGIV 28


>BC029376-1|AAH29376.1|  396|Homo sapiens Obg-like ATPase 1 protein.
          Length = 396

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 11/15 (73%), Positives = 14/15 (93%)
 Frame = +1

Query: 112 PLIGRVGTNLKVGIV 156
           P+IGR GT+LK+GIV
Sbjct: 14  PIIGRFGTSLKIGIV 28


>BC013925-1|AAH13925.1|  278|Homo sapiens GTPBP9 protein protein.
          Length = 278

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 11/15 (73%), Positives = 14/15 (93%)
 Frame = +1

Query: 112 PLIGRVGTNLKVGIV 156
           P+IGR GT+LK+GIV
Sbjct: 14  PIIGRFGTSLKIGIV 28


>BC012842-1|AAH12842.1|  396|Homo sapiens GTP-binding protein 9
           (putative) protein.
          Length = 396

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 11/15 (73%), Positives = 14/15 (93%)
 Frame = +1

Query: 112 PLIGRVGTNLKVGIV 156
           P+IGR GT+LK+GIV
Sbjct: 14  PIIGRFGTSLKIGIV 28


>AL136546-1|CAB66481.1|  396|Homo sapiens hypothetical protein
           protein.
          Length = 396

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 11/15 (73%), Positives = 14/15 (93%)
 Frame = +1

Query: 112 PLIGRVGTNLKVGIV 156
           P+IGR GT+LK+GIV
Sbjct: 14  PIIGRFGTSLKIGIV 28


>AK027523-1|BAB55174.1|  396|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14617 fis, clone NT2RP1001410, moderately
           similar to PUTATIVE GTP-BINDING PROTEIN W08E3.3. ).
          Length = 396

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 11/15 (73%), Positives = 14/15 (93%)
 Frame = +1

Query: 112 PLIGRVGTNLKVGIV 156
           P+IGR GT+LK+GIV
Sbjct: 14  PIIGRFGTSLKIGIV 28


>AF134478-1|AAP97255.1|  396|Homo sapiens GTP-binding protein
           protein.
          Length = 396

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 11/15 (73%), Positives = 14/15 (93%)
 Frame = +1

Query: 112 PLIGRVGTNLKVGIV 156
           P+IGR GT+LK+GIV
Sbjct: 14  PIIGRFGTSLKIGIV 28


>AC013467-1|AAY14779.1|  183|Homo sapiens unknown protein.
          Length = 183

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 11/15 (73%), Positives = 14/15 (93%)
 Frame = +1

Query: 112 PLIGRVGTNLKVGIV 156
           P+IGR GT+LK+GIV
Sbjct: 14  PIIGRFGTSLKIGIV 28


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,941,148
Number of Sequences: 237096
Number of extensions: 396730
Number of successful extensions: 696
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 695
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 696
length of database: 76,859,062
effective HSP length: 31
effective length of database: 69,509,086
effective search space used: 1390181720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)