Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_G19
         (157 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    20   2.4  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    20   2.4  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    19   4.3  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    19   4.3  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    19   4.3  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    19   5.6  
AY739658-1|AAU85297.1|  664|Apis mellifera hyperpolarization-act...    19   5.6  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          19   7.4  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      19   7.4  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 20.2 bits (40), Expect = 2.4
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +1

Query: 97  EPEKKPLIGRV 129
           EP K+PL+G +
Sbjct: 842 EPSKRPLLGAI 852


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 20.2 bits (40), Expect = 2.4
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +1

Query: 97  EPEKKPLIGRV 129
           EP K+PL+G +
Sbjct: 880 EPSKRPLLGAI 890


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 19.4 bits (38), Expect = 4.3
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -2

Query: 54  INNAQNVCP 28
           INN ++VCP
Sbjct: 141 INNVRSVCP 149


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 19.4 bits (38), Expect = 4.3
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +3

Query: 123 TCGNKLKSGYC 155
           TCGN   + YC
Sbjct: 138 TCGNPWNTRYC 148


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 19.4 bits (38), Expect = 4.3
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +3

Query: 123 TCGNKLKSGYC 155
           TCGN   + YC
Sbjct: 191 TCGNPWNTRYC 201


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 19.0 bits (37), Expect = 5.6
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +1

Query: 19  NTKRTHVLGIINK 57
           NT+ TH+   +NK
Sbjct: 492 NTEMTHLTNAVNK 504


>AY739658-1|AAU85297.1|  664|Apis mellifera
           hyperpolarization-activated ion channelvariant L
           protein.
          Length = 664

 Score = 19.0 bits (37), Expect = 5.6
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -3

Query: 131 PTRPMSGFFSGSSTFLVAFRILL*FLLI 48
           P R  + F + +S F+  F ++   LLI
Sbjct: 262 PVRKATLFLNMASVFMRIFNLICMMLLI 289


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 18.6 bits (36), Expect = 7.4
 Identities = 6/15 (40%), Positives = 8/15 (53%)
 Frame = -1

Query: 97  LQPFWWHSEFYFNFY 53
           L+ F W   FY  +Y
Sbjct: 282 LEEFDWQKPFYPGYY 296


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 18.6 bits (36), Expect = 7.4
 Identities = 6/15 (40%), Positives = 8/15 (53%)
 Frame = -1

Query: 97  LQPFWWHSEFYFNFY 53
           L+ F W   FY  +Y
Sbjct: 282 LEEFDWQKPFYPGYY 296


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,104
Number of Sequences: 438
Number of extensions: 700
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 31
effective length of database: 132,765
effective search space used:  2655300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)