Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_G13
         (469 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    25   0.54 
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    22   2.9  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   6.6  
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    21   6.6  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   6.6  
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           21   6.6  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   6.6  

>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 24.6 bits (51), Expect = 0.54
 Identities = 11/39 (28%), Positives = 21/39 (53%)
 Frame = +3

Query: 189 GSKTERLYIYYVFSYSWGIYFCNGAIDLYRQWSLFSILL 305
           G   E + ++Y    + G++F +G   +YR   L ++LL
Sbjct: 80  GKFKEPVAVFYASEIAIGLFFLHGRGIVYRDLKLDNVLL 118


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -3

Query: 278 SVQINSSITKIYSPTIAKYIVNI*SF 201
           S Q  +S T +Y P   KY +N  SF
Sbjct: 219 SFQRLTSSTFVYDPRYTKYTINDESF 244


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +3

Query: 180 IILGSKTERLYIYYVFSYSWGIYFC 254
           +I G   E  YI+  F Y +G  FC
Sbjct: 103 LISGLPPEIYYIWSHFPYVFGEAFC 127


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 210 IVFPFYFLRLFSYKTYFYLN 151
           IVFP +FL +  +  + YL+
Sbjct: 429 IVFPLFFLAINVFYWFAYLS 448


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -2

Query: 69  RAMILAKYNDYMYYINPFXP 10
           RA++    N   +Y NPF P
Sbjct: 279 RAIVETLANFMRFYYNPFTP 298


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -2

Query: 69  RAMILAKYNDYMYYINPFXP 10
           RA++    N   +Y NPF P
Sbjct: 150 RAIVETLANFMRFYYNPFTP 169


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -2

Query: 69  RAMILAKYNDYMYYINPFXP 10
           RA++    N   +Y NPF P
Sbjct: 279 RAIVETLANFMRFYYNPFTP 298


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,405
Number of Sequences: 438
Number of extensions: 2324
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12559158
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)