Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_G11
(538 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0607 - 24302582-24303075,24303150-24304197 32 0.25
11_01_0631 - 5063622-5063635,5065050-5065203,5065280-5065441,506... 30 1.0
06_01_0975 - 7566280-7566461,7567004-7567132,7567203-7567236,756... 29 1.8
04_04_1197 + 31672019-31672325,31672431-31672740,31673334-316783... 29 1.8
04_03_0935 + 20918617-20919299,20919328-20919627,20919680-209198... 29 2.3
04_04_0748 + 27738155-27740290 29 3.1
01_07_0353 + 42962769-42962972,42963062-42963138,42963571-429638... 29 3.1
01_03_0001 + 11500567-11500696,11503312-11503397,11503515-115040... 29 3.1
11_06_0676 + 26152192-26152367,26152669-26152708,26152857-261529... 28 4.1
07_03_0971 + 23038409-23039134,23040321-23040611 28 4.1
05_04_0085 + 17790417-17790714,17791826-17791869,17793658-177937... 28 4.1
07_03_1666 + 28482262-28482385,28482475-28482992 28 5.4
07_03_0424 - 18060133-18061581 28 5.4
06_03_1033 - 27035977-27036144,27036420-27036544,27036695-270367... 28 5.4
01_01_0252 - 2062867-2063048,2063509-2063637,2063702-2063735,206... 28 5.4
09_01_0097 - 1450544-1452058 27 7.2
07_03_0418 + 17979504-17980964 27 7.2
07_03_0415 + 17920383-17921843 27 7.2
01_05_0073 - 17899175-17899756 27 7.2
12_01_0106 - 833236-833568,835657-836098,837117-837227,837427-83... 27 9.5
08_02_1483 - 27451391-27451794,27451883-27452387 27 9.5
01_07_0294 + 42571700-42573373,42573653-42573720,42573785-425738... 27 9.5
01_04_0113 - 16133794-16134933,16135030-16135611,16135698-16135853 27 9.5
>02_04_0607 - 24302582-24303075,24303150-24304197
Length = 513
Score = 32.3 bits (70), Expect = 0.25
Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +1
Query: 52 EVIGCQCFVPCARDVV-TLDDPLELMRVCRAAGLATPQFWVVANDEDVRAWYDSGAAKEG 228
+V+GC F P R V T+D L C A +TP + V+A+ DV A + G +G
Sbjct: 367 KVVGCG-FEPAKRKVFFTVDGQLVHAVSCNADAFSTPMYPVLASSFDVMALVNLG---QG 422
Query: 229 RHFIASAGAR 258
+ A A AR
Sbjct: 423 KFRYAPANAR 432
>11_01_0631 -
5063622-5063635,5065050-5065203,5065280-5065441,
5065657-5066633,5067502-5067523
Length = 442
Score = 30.3 bits (65), Expect = 1.0
Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 5/66 (7%)
Frame = +1
Query: 79 PCARDVVTLDDPLELMRVCRAAGLATPQFWVVANDED-----VRAWYDSGAAKEGRHFIA 243
P RD+ D L L+R C + +FW D+D V W A + RH +
Sbjct: 103 PRVRDIREFVDHLLLLRGCEPLDMCELRFWSDYYDDDDETRRVNLWIRHAVASQVRHLVV 162
Query: 244 SAGARG 261
+ A G
Sbjct: 163 RSIAGG 168
>06_01_0975 -
7566280-7566461,7567004-7567132,7567203-7567236,
7567347-7567579,7568526-7568587,7568704-7568761,
7568856-7568922,7569016-7569063
Length = 270
Score = 29.5 bits (63), Expect = 1.8
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 331 AEKPWVIVREPKGERIVTCTTLKESRVVNNVTCRVDTARK 450
A K WV + + ER+V T KE ++V T +D RK
Sbjct: 39 AMKDWVAELQSENERLVAKLTQKEQQLVEAQTLLLDETRK 78
>04_04_1197 + 31672019-31672325,31672431-31672740,31673334-31678335,
31678677-31678715
Length = 1885
Score = 29.5 bits (63), Expect = 1.8
Identities = 27/87 (31%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
Frame = +2
Query: 83 VQEMSSLLTIRWNSCVYVEPLDSPPHNSGSWLTMRMCERGMTVVPRRKDAISLLAPELEA 262
+Q ++SL +R+N C + L + HN S + + G P K L P LE
Sbjct: 1796 LQLLTSLQELRFNCCYNLVDLPTGLHNLPSLKRLEIWNCGSIARPLEKG----LPPSLEE 1851
Query: 263 LGTV-CDL*CQRKSRNSDSPVKLALKN 340
L V C ++ R S K ALKN
Sbjct: 1852 LAIVDCSNELAQQCRLLASKRKCALKN 1878
>04_03_0935 +
20918617-20919299,20919328-20919627,20919680-20919836,
20921338-20921397,20921554-20921670
Length = 438
Score = 29.1 bits (62), Expect = 2.3
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1
Query: 178 NDEDVRAWYDSGAAKEGRH 234
+D++V AWYDSG RH
Sbjct: 365 SDDEVEAWYDSGTETSERH 383
>04_04_0748 + 27738155-27740290
Length = 711
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = -3
Query: 158 GVASPAALHTRMSSNGSSRVTTSLAQGTK 72
GV+SPAAL + +SS+G +T+S +K
Sbjct: 183 GVSSPAALASDLSSSGGRSLTSSSGSNSK 211
>01_07_0353 +
42962769-42962972,42963062-42963138,42963571-42963817,
42963907-42964476,42964998-42965171,42965514-42965640,
42965719-42965828,42966707-42966907,42966999-42967966,
42968110-42968358,42968760-42969105
Length = 1090
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Frame = -2
Query: 177 SHDPELWGGESSGST--------YTHEFQRIVKSDDISCTRNEALAANDLQMRFRQSVIV 22
S D L G E+ G+T Y E+ ++ D I+C+ + ND+ + + + +
Sbjct: 262 SGDSALIGNETCGTTSTITLFRHYIEEYSECLEGDIINCSSVTSSTNNDVALLLKCTSPL 321
Query: 21 RWSRSS 4
WSR+S
Sbjct: 322 LWSRNS 327
>01_03_0001 +
11500567-11500696,11503312-11503397,11503515-11504097,
11504242-11504474
Length = 343
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Frame = -3
Query: 206 SYHARTSSSLATTQNCG----VASPAALHTRMSSNGSSRVTTSL-AQGTKHWQP 60
S + T+SS+ T Q + P ALHT+++ + +TT+L Q +H+QP
Sbjct: 90 STDSTTASSIQTKQTPALLQQIIHPRALHTQLAPDVHQVITTNLPQQHIQHYQP 143
>11_06_0676 +
26152192-26152367,26152669-26152708,26152857-26152966,
26153886-26153934,26154157-26154206,26154606-26155150,
26155583-26155743,26156231-26156440,26156525-26156690,
26156765-26156869,26157465-26157760
Length = 635
Score = 28.3 bits (60), Expect = 4.1
Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 2/89 (2%)
Frame = +1
Query: 151 ATPQFWVVANDEDVRAWYDSGAAKEGRHFIASAGARGARDRLRFVMPEEKSQFRFTRE-I 327
A Q+ AN E + + F+AS G R LRF+ + + FT+E I
Sbjct: 137 ANQQYRSKANQESAAITEEVNQEQTAARFVASEAQEGQRVELRFL--NKLNPLVFTKEKI 194
Query: 328 SAEKPWVI-VREPKGERIVTCTTLKESRV 411
+AE I + + +I+T L +R+
Sbjct: 195 TAEDGTAIKIAIVRDNQIITSGPLSSARI 223
>07_03_0971 + 23038409-23039134,23040321-23040611
Length = 338
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Frame = +1
Query: 37 AKPHLEVIGCQCFVPCARDVVT--LDDPLELMRVCRAAGLAT 156
A PH + C F PC R + T LD + L+ A +AT
Sbjct: 21 ATPHSRAVSCVRFSPCGRLLATASLDGTVALLSPSSLAAIAT 62
>05_04_0085 +
17790417-17790714,17791826-17791869,17793658-17793793,
17794315-17794391,17794646-17794706,17794707-17794924,
17795168-17795412,17796032-17796401,17796916-17797344
Length = 625
Score = 28.3 bits (60), Expect = 4.1
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = -2
Query: 189 ILIVSHDPELWGGESS 142
IL + HDPE+WG ++S
Sbjct: 526 ILFIHHDPEIWGKDAS 541
>07_03_1666 + 28482262-28482385,28482475-28482992
Length = 213
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = -2
Query: 273 TVPSASSSGASNEMASFLRGTTVIPRSHILIVSHDPELWGGESSGSTYTHEFQRIVKSDD 94
T P A+S GAS A+ GTT++ +V H + G ++ +T ++ S D
Sbjct: 101 TPPPAASGGASLPAAAAAGGTTLVAP----VVPHGARILGATAADNTLRQILDQLQSSSD 156
Query: 93 I 91
+
Sbjct: 157 L 157
>07_03_0424 - 18060133-18061581
Length = 482
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = -2
Query: 390 RTRNNSLPFGLPDNHPRFFSA 328
R R S+P GLPD HPR A
Sbjct: 60 RLRYASIPDGLPDGHPRHAGA 80
>06_03_1033 -
27035977-27036144,27036420-27036544,27036695-27036766,
27036872-27036976,27037513-27037567,27038196-27038276,
27039109-27039159,27039531-27039594,27040783-27040850,
27040993-27041079,27041401-27041655,27041768-27041890,
27042013-27042297,27042948-27043087,27043696-27043759,
27043929-27044048
Length = 620
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -3
Query: 488 QASASSSFWGTIPFLAVSTRHVTLFTTRDSFRVVH 384
+AS ++ W T+ L +S +H+ L T D R VH
Sbjct: 398 RASKENTLWMTLYVLLLSRKHMYLDGTTDITRTVH 432
>01_01_0252 -
2062867-2063048,2063509-2063637,2063702-2063735,
2063844-2064076,2064306-2064367,2064500-2064557,
2064709-2064775,2064881-2064928
Length = 270
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 331 AEKPWVIVREPKGERIVTCTTLKESRVVNNVTCRVDTARK 450
A K WV + + ER++ T KE ++V T +D RK
Sbjct: 39 AMKDWVADLQGENERLIAKLTQKEQQLVEVQTLLLDETRK 78
>09_01_0097 - 1450544-1452058
Length = 504
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -2
Query: 393 SRTRNNSLPFGLPDNHPR 340
+R R S+P GLPD+HPR
Sbjct: 64 TRLRLLSIPDGLPDDHPR 81
>07_03_0418 + 17979504-17980964
Length = 486
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -2
Query: 390 RTRNNSLPFGLPDNHPR 340
R R S+P GLPD+HPR
Sbjct: 63 RLRFMSIPDGLPDDHPR 79
>07_03_0415 + 17920383-17921843
Length = 486
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -2
Query: 390 RTRNNSLPFGLPDNHPR 340
R R S+P GLPD+HPR
Sbjct: 63 RLRFMSIPDGLPDDHPR 79
>01_05_0073 - 17899175-17899756
Length = 193
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = -3
Query: 221 FAAPLSYHARTSSSLATTQNCGVASPAALHTRMSSNGSSRVTTSLAQGTKHWQP 60
F+ + R+SS +++ SP+AL TR +G + + LA WQP
Sbjct: 54 FSMSMKVEKRSSSESMSSK----PSPSALPTRPKLSGKRKAASDLAWRQGQWQP 103
>12_01_0106 -
833236-833568,835657-836098,837117-837227,837427-837755
Length = 404
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -3
Query: 176 ATTQNCGVASPAALHTRMSSNGSSRVTTSLAQGTKHW 66
A + +C SPAA T SS+ T+S + T +W
Sbjct: 213 AASSSCAAQSPAAAATSSSSDMMMTSTSSTSSETGNW 249
>08_02_1483 - 27451391-27451794,27451883-27452387
Length = 302
Score = 27.1 bits (57), Expect = 9.5
Identities = 22/90 (24%), Positives = 34/90 (37%), Gaps = 1/90 (1%)
Frame = -2
Query: 288 HYKSQTVPSASSSGASNEMASFLRGTTVIPRSHILIVSHDPELWGGESSGSTYTHEFQRI 109
H KS VP+A N +AS + S S P GE F R
Sbjct: 124 HVKSTWVPAAKRRERQNLLASAAESSKRPRDSAAAATSTTPTTSSGEQQQMMVGERFPRE 183
Query: 108 VKSDDI-SCTRNEALAANDLQMRFRQSVIV 22
V S+ + C R + D ++ ++ +V +
Sbjct: 184 VSSEAVFRCVRLGPVEEADAEVAYQTTVSI 213
>01_07_0294 +
42571700-42573373,42573653-42573720,42573785-42573819,
42573988-42574061,42574491-42574726,42574958-42575044,
42575356-42575455,42575584-42576003
Length = 897
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = -3
Query: 230 RPSFAAPLSYHARTSSSLATTQNCGVASPAALHTRMSSNGSSRVTTSLAQGTKHWQP 60
+ + A+P + ++T S T+ N ASP+A R S+ + + + A GT P
Sbjct: 314 KAAVASPAATRSKTRSKCKTSSNSAAASPSA---RSSAIAARKKNNATATGTTATPP 367
>01_04_0113 - 16133794-16134933,16135030-16135611,16135698-16135853
Length = 625
Score = 27.1 bits (57), Expect = 9.5
Identities = 19/66 (28%), Positives = 34/66 (51%)
Frame = +1
Query: 187 DVRAWYDSGAAKEGRHFIASAGARGARDRLRFVMPEEKSQFRFTREISAEKPWVIVREPK 366
D+R S AA++ +A +G+ + +RFV P +K FR ++ I KP +
Sbjct: 114 DLRRQAMSNAARDAEEQQLAAQGKGSNNNVRFVQP-DKVVFR-SQPIPGGKPARRAASNR 171
Query: 367 GERIVT 384
G R+++
Sbjct: 172 GGRMMS 177
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,602,162
Number of Sequences: 37544
Number of extensions: 368687
Number of successful extensions: 1102
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1082
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1102
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1186491600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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