Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_G11
         (538 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.              25   0.65 
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    24   0.86 
AB083010-1|BAC54131.1|  132|Apis mellifera fatty acid binding pr...    23   2.6  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       22   4.6  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   6.0  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   8.0  

>DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.
          Length = 145

 Score = 24.6 bits (51), Expect = 0.65
 Identities = 8/19 (42%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
 Frame = +3

Query: 336 KTLGDCQGAQRGENC-YVY 389
           K + +C+G  +G+NC Y Y
Sbjct: 110 KAISECKGIAKGDNCEYAY 128


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 24.2 bits (50), Expect = 0.86
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +1

Query: 385 CTTLKESRVVNNVTCRVDTARKGIV 459
           C T ++S VV NVT  ++T    ++
Sbjct: 823 CVTTEQSVVVTNVTTTINTPTTSVI 847


>AB083010-1|BAC54131.1|  132|Apis mellifera fatty acid binding
           protein protein.
          Length = 132

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -2

Query: 123 EFQRIVKSDDISCTR 79
           E + I+K DDI CTR
Sbjct: 112 EMKAIMKVDDIICTR 126


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
 Frame = -3

Query: 506 DTNRCAQASASSSFWGTIPFL-AVSTRHVTLFTTRDSFRVVHVTILSPLGSLTI 348
           D   CAQ  +  +    +P +  +  R V L  T  ++    V I+SP   LTI
Sbjct: 235 DLMACAQTGSGKTAAFAVPIINTLLERSVDLVVT-STYCEPQVVIVSPTRELTI 287


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 9/42 (21%), Positives = 19/42 (45%)
 Frame = -2

Query: 288 HYKSQTVPSASSSGASNEMASFLRGTTVIPRSHILIVSHDPE 163
           H  S+ +  A +    N      +   +IP ++  ++SHD +
Sbjct: 166 HLDSRVIQEAQNIAIQNTQGKNNQQNILIPVNYSALLSHDEQ 207


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -1

Query: 421 HYSQHEILSESYT*QFSPLWA 359
           HY Q   LSESY+   + ++A
Sbjct: 365 HYRQPPTLSESYSSYVNSMYA 385


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,254
Number of Sequences: 438
Number of extensions: 3384
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15213684
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)