Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_G10
(550 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC018151-1|AAH18151.1| 204|Homo sapiens ribosomal protein S5 pr... 351 1e-96
BC015405-1|AAH15405.1| 204|Homo sapiens ribosomal protein S5 pr... 351 1e-96
AB061853-1|BAB79493.1| 204|Homo sapiens ribosomal protein S5 pr... 351 1e-96
AK223106-1|BAD96826.1| 204|Homo sapiens ribosomal protein S5 va... 348 7e-96
U14970-1|AAA85658.1| 204|Homo sapiens ribosomal protein S5 prot... 346 3e-95
AB007149-1|BAA25815.1| 55|Homo sapiens ribosomal protein S5 pr... 99 5e-21
AB209803-1|BAD93040.1| 107|Homo sapiens ribosomal protein S5 va... 92 1e-18
D86966-1|BAA13202.2| 1317|Homo sapiens KIAA0211 protein. 31 3.5
BC112234-1|AAI12235.1| 1267|Homo sapiens zinc finger protein 592... 31 3.5
BC112232-1|AAI12233.1| 1267|Homo sapiens zinc finger protein 592... 31 3.5
BC094688-1|AAH94688.1| 1267|Homo sapiens zinc finger protein 592... 31 3.5
L32163-1|AAA36817.1| 622|Homo sapiens zinc finger protein protein. 29 8.1
AF011573-1|AAB84385.1| 1029|Homo sapiens zinc finger protein pro... 29 8.1
>BC018151-1|AAH18151.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 351 bits (862), Expect = 1e-96
Identities = 167/181 (92%), Positives = 175/181 (96%)
Frame = +3
Query: 6 RLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLM 185
+LFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAGRYA KRFRKAQCPIVERLTNS+M
Sbjct: 18 KLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPIVERLTNSMM 77
Query: 186 MHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQ 365
MHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV AIINSGPREDSTRIGRAGTVRRQ
Sbjct: 78 MHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQ 137
Query: 366 AVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKTDELE 545
AVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAEC+ADELINAAKGSSNSYAIKK DELE
Sbjct: 138 AVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELE 197
Query: 546 R 548
R
Sbjct: 198 R 198
>BC015405-1|AAH15405.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 351 bits (862), Expect = 1e-96
Identities = 167/181 (92%), Positives = 175/181 (96%)
Frame = +3
Query: 6 RLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLM 185
+LFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAGRYA KRFRKAQCPIVERLTNS+M
Sbjct: 18 KLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPIVERLTNSMM 77
Query: 186 MHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQ 365
MHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV AIINSGPREDSTRIGRAGTVRRQ
Sbjct: 78 MHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQ 137
Query: 366 AVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKTDELE 545
AVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAEC+ADELINAAKGSSNSYAIKK DELE
Sbjct: 138 AVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELE 197
Query: 546 R 548
R
Sbjct: 198 R 198
>AB061853-1|BAB79493.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 351 bits (862), Expect = 1e-96
Identities = 167/181 (92%), Positives = 175/181 (96%)
Frame = +3
Query: 6 RLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLM 185
+LFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAGRYA KRFRKAQCPIVERLTNS+M
Sbjct: 18 KLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPIVERLTNSMM 77
Query: 186 MHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQ 365
MHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV AIINSGPREDSTRIGRAGTVRRQ
Sbjct: 78 MHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQ 137
Query: 366 AVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKTDELE 545
AVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAEC+ADELINAAKGSSNSYAIKK DELE
Sbjct: 138 AVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELE 197
Query: 546 R 548
R
Sbjct: 198 R 198
>AK223106-1|BAD96826.1| 204|Homo sapiens ribosomal protein S5
variant protein.
Length = 204
Score = 348 bits (856), Expect = 7e-96
Identities = 166/181 (91%), Positives = 174/181 (96%)
Frame = +3
Query: 6 RLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLM 185
+LFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAGRYA KRFRKAQCPIVERLTNS+M
Sbjct: 18 KLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPIVERLTNSMM 77
Query: 186 MHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQ 365
MHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV AIINSGPREDSTRIGRAGTVRRQ
Sbjct: 78 MHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQ 137
Query: 366 AVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKTDELE 545
AVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAEC+ADELINAAKGSSN YAIKK DELE
Sbjct: 138 AVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNFYAIKKRDELE 197
Query: 546 R 548
R
Sbjct: 198 R 198
>U14970-1|AAA85658.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 346 bits (851), Expect = 3e-95
Identities = 165/181 (91%), Positives = 173/181 (95%)
Frame = +3
Query: 6 RLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLM 185
+LFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAGRYA FRKAQCPIVERLTNS+M
Sbjct: 18 KLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAANAFRKAQCPIVERLTNSMM 77
Query: 186 MHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQ 365
MHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV AIINSGPREDSTRIGRAGTVRRQ
Sbjct: 78 MHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQ 137
Query: 366 AVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKTDELE 545
AVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAEC+ADELINAAKGSSNSYAIKK DELE
Sbjct: 138 AVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELE 197
Query: 546 R 548
R
Sbjct: 198 R 198
>AB007149-1|BAA25815.1| 55|Homo sapiens ribosomal protein S5
protein.
Length = 55
Score = 99 bits (238), Expect = 5e-21
Identities = 47/49 (95%), Positives = 48/49 (97%)
Frame = +3
Query: 402 AIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKTDELER 548
AIWLLCTGAREAAFRNIKTIAEC+ADELINAAKGSSNSYAIKK DELER
Sbjct: 1 AIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELER 49
>AB209803-1|BAD93040.1| 107|Homo sapiens ribosomal protein S5
variant protein.
Length = 107
Score = 92.3 bits (219), Expect = 1e-18
Identities = 45/52 (86%), Positives = 46/52 (88%)
Frame = +3
Query: 144 AQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTA 299
AQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGE L LV A
Sbjct: 1 AQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGEVGLCGLVRA 52
>D86966-1|BAA13202.2| 1317|Homo sapiens KIAA0211 protein.
Length = 1317
Score = 30.7 bits (66), Expect = 3.5
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +3
Query: 60 QDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNN 203
Q+++ +E Y ++ S GR KR+ QC NSL H RNN
Sbjct: 1039 QEWVPDRESYVSHMKKSHGRTL-KRYPCRQCEQSFHTPNSLRKHIRNN 1085
>BC112234-1|AAI12235.1| 1267|Homo sapiens zinc finger protein 592
protein.
Length = 1267
Score = 30.7 bits (66), Expect = 3.5
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +3
Query: 60 QDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNN 203
Q+++ +E Y ++ S GR KR+ QC NSL H RNN
Sbjct: 989 QEWVPDRESYVSHMKKSHGRTL-KRYPCRQCEQSFHTPNSLRKHIRNN 1035
>BC112232-1|AAI12233.1| 1267|Homo sapiens zinc finger protein 592
protein.
Length = 1267
Score = 30.7 bits (66), Expect = 3.5
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +3
Query: 60 QDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNN 203
Q+++ +E Y ++ S GR KR+ QC NSL H RNN
Sbjct: 989 QEWVPDRESYVSHMKKSHGRTL-KRYPCRQCEQSFHTPNSLRKHIRNN 1035
>BC094688-1|AAH94688.1| 1267|Homo sapiens zinc finger protein 592
protein.
Length = 1267
Score = 30.7 bits (66), Expect = 3.5
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +3
Query: 60 QDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNN 203
Q+++ +E Y ++ S GR KR+ QC NSL H RNN
Sbjct: 989 QEWVPDRESYVSHMKKSHGRTL-KRYPCRQCEQSFHTPNSLRKHIRNN 1035
>L32163-1|AAA36817.1| 622|Homo sapiens zinc finger protein protein.
Length = 622
Score = 29.5 bits (63), Expect = 8.1
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -1
Query: 175 LVKRSTIGH*ALRNRL*AYLPAECGKYFAYFS 80
++K+S IGH + R +Y +CGK F+Y S
Sbjct: 406 ILKKSLIGHQRIHTREKSYKCNDCGKVFSYRS 437
>AF011573-1|AAB84385.1| 1029|Homo sapiens zinc finger protein
protein.
Length = 1029
Score = 29.5 bits (63), Expect = 8.1
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -1
Query: 175 LVKRSTIGH*ALRNRL*AYLPAECGKYFAYFS 80
++K+S IGH + R +Y +CGK F+Y S
Sbjct: 800 ILKKSLIGHQRIHTREKSYKCNDCGKVFSYRS 831
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,281,681
Number of Sequences: 237096
Number of extensions: 1792340
Number of successful extensions: 3593
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3454
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3593
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5421005376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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