Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_G09
(556 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC14F5.06 |||iron-sulfur protein|Schizosaccharomyces pombe|chr... 207 7e-55
SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces po... 40 2e-04
SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase Abc4|... 38 0.001
SPCC417.08 |tef3||translation elongation factor eEF3|Schizosacch... 36 0.005
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 35 0.009
SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces pom... 33 0.028
SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family |Schizosa... 32 0.049
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 32 0.049
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 32 0.065
SPAC10F6.02c |prp22||ATP-dependent RNA helicase Prp22|Schizosacc... 31 0.15
SPBC1105.15c |htd2||3-hydroxyacyl-ACP dehydratase Htd2 |Schizosa... 29 0.35
SPBC1711.17 |prp16|SPBC17G9.01|ATP-dependent RNA helicase Prp16|... 29 0.35
SPBC18H10.10c |cwc16||complexed with Cdc5 protein Cwf16|Schizosa... 29 0.35
SPAC323.04 |||mitochondrial ATPase |Schizosaccharomyces pombe|ch... 29 0.46
SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar ... 29 0.46
SPCC188.12 |spn6|SPCC584.09|septin Spn6|Schizosaccharomyces pomb... 28 0.80
SPAC644.07 |||Rieske ISP assembly protein|Schizosaccharomyces po... 28 0.80
SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transpo... 28 0.80
SPBC29A10.15 |orc1|orp1, cdc30|origin recognition complex subuni... 28 1.1
SPAC637.08 |||iron-sulfur cluster assembly ATPase Nbp35|Schizosa... 28 1.1
SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1 |Schizo... 28 1.1
SPBC19G7.01c |msh2|swi8, mut3, SPBC24C6.12c|MutS protein homolog... 28 1.1
SPBC16H5.10c |prp43||ATP-dependent RNA helicase Prp43|Schizosacc... 27 1.4
SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces pombe... 27 1.9
SPAC20G4.01 ||SPAC22F8.13|CCR4-Not complex subunit Caf16|Schizos... 27 1.9
SPAC1834.02 |aro1||pentafunctional aromatic polypeptide Aro1 |Sc... 27 1.9
SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase Abc... 27 1.9
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 27 1.9
SPAC144.14 |klp8||kinesin-like protein Klp8|Schizosaccharomyces ... 27 1.9
SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase Mok11|S... 27 2.5
SPAC19D5.05c |||U3 snoRNP-associated protein Imp3 |Schizosacchar... 27 2.5
SPAC2G11.11c |prh1||ATP-dependent RNA helicase Prh1|Schizosaccha... 27 2.5
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 27 2.5
SPAC26H5.02c |||DNA replication ATPase|Schizosaccharomyces pombe... 26 3.2
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 26 4.3
SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces ... 26 4.3
SPAC23C4.14 |alg1||mannosyltransferase complex subunit Alg1 |Sch... 26 4.3
SPAC20G8.01 |cdc17||ATP-dependent DNA ligase Cdc17|Schizosacchar... 25 5.7
SPAPB24D3.09c |pdr1||ABC transporter Pdr1|Schizosaccharomyces po... 25 5.7
SPAC458.03 |||nuclear telomere cap complex subunit |Schizosaccha... 25 5.7
SPAC19A8.11c |||recombination protein Irc6 |Schizosaccharomyces ... 25 7.5
SPBC119.15 |||AAA family ATPase, unknown biological role|Schizos... 25 7.5
SPBC16D10.04c |dna2||DNA replication endonuclease-helicase Dna2|... 25 9.9
SPBC3D6.02 |but2||But2 family protein But2 |Schizosaccharomyces ... 25 9.9
SPBC19C2.01 |cdc28|prp8|ATP-dependent RNA helicase Cdc28 |Schizo... 25 9.9
SPAC11E3.14 |||conserved protein|Schizosaccharomyces pombe|chr 1... 25 9.9
SPAC23E2.02 |lsd2|swm2, saf140|histone demethylase SWIRM2 |Schiz... 25 9.9
>SPBC14F5.06 |||iron-sulfur protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 593
Score = 207 bits (506), Expect = 7e-55
Identities = 103/181 (56%), Positives = 129/181 (71%)
Frame = +3
Query: 9 IRSLINPDKFIIVVEHDLSVLDYLSDFICCLYGVPGAYGVVTMPFSVREGINIFLDGFVP 188
IRSL+ ++IVVEHDLSVLDYLSDF+C LYGVP YGVVT+P+SVREGINIFLDG +P
Sbjct: 262 IRSLLATTNYVIVVEHDLSVLDYLSDFVCVLYGVPSMYGVVTLPYSVREGINIFLDGHIP 321
Query: 189 TENMRFRTESLVFKVAESATEEEIKRMNHYEYPEMSKHMGDFDLRVMPGEFSDSEILVLL 368
TEN+RFR+E+L F++A+++ E R Y YP+ GDF L + G FSD+EI+VLL
Sbjct: 322 TENLRFRSEALTFRLADASDEITADRTAEYNYPDHVIEQGDFKLTIKSGGFSDAEIIVLL 381
Query: 369 GENGTGKTTFIRMLAGNLEPDDGSGQLPQLHISYKPQKISPKSQGLVRSLLHDKIRDAYI 548
GENGTGKTTF + +A N + L IS KPQ I+PK QG VR L KIR A++
Sbjct: 382 GENGTGKTTFCKWMAKNSD----------LKISMKPQTIAPKFQGTVRMLFLKKIRAAFL 431
Query: 549 H 551
+
Sbjct: 432 N 432
Score = 37.5 bits (83), Expect = 0.001
Identities = 25/93 (26%), Positives = 38/93 (40%)
Frame = +3
Query: 12 RSLINPDKFIIVVEHDLSVLDYLSDFICCLYGVPGAYGVVTMPFSVREGINIFLDGFVPT 191
R ++N K +VEHD + YL+D + G P P S+ G+N FL T
Sbjct: 500 RFIVNSRKTAFIVEHDFIMATYLADRVILFEGQPSRDARCNPPQSLLTGMNTFLKNLDVT 559
Query: 192 ENMRFRTESLVFKVAESATEEEIKRMNHYEYPE 290
T +S ++E K +Y + E
Sbjct: 560 FRRDPNTLRPRINKFDSQMDQEQKNAGNYFFLE 592
>SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1057
Score = 39.9 bits (89), Expect = 2e-04
Identities = 45/155 (29%), Positives = 65/155 (41%), Gaps = 9/155 (5%)
Frame = +3
Query: 42 IVVEHDLSVLDYLSDFICCLYGVP------GAY-GVVTMPFSVREGINIFLDGFVPTENM 200
++V HD S LD++ I GV G Y G ++ V+ + E
Sbjct: 614 LIVSHDSSFLDHVCTDIIHYEGVKNQAKKLGYYQGNLSAFVKVKPEAKSYYTLTATNEKF 673
Query: 201 RFRTESLVFKVAESATEEEIKRMN-HYEYPEMSKHMGDFDLRVMPGEFSDSEILVLLGEN 377
F ++ V S T +K N Y YP K D V G S S + +LG N
Sbjct: 674 VFPPPGILTGV-RSNTRLILKMTNASYTYPNAKKKSLD---NVTVG-LSLSSRVAILGPN 728
Query: 378 GTGKTTFIRMLAGNLEPDDGS-GQLPQLHISYKPQ 479
G GK+T I++L G + P +G + P L + Y Q
Sbjct: 729 GAGKSTLIKVLIGEVIPQEGKVFKHPNLRVGYVAQ 763
>SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase
Abc4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1469
Score = 37.9 bits (84), Expect = 0.001
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = +3
Query: 306 GDFDLRVMPGEFSDSEILVLLGENGTGKTTFIRMLAGNLEPDDGSGQLPQLH-ISYKPQ 479
GDF LR + F +++ +++G G+GK++ I L G L + GS LP+ +SY Q
Sbjct: 627 GDFCLRDLNIVFPRNKLSIVIGPTGSGKSSLISALLGELSLNKGSYNLPRSKGVSYVSQ 685
>SPCC417.08 |tef3||translation elongation factor
eEF3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1047
Score = 35.5 bits (78), Expect = 0.005
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Frame = +3
Query: 198 MRFRTESLVFKVAESATEEEIKRMNH--YEYPEMSK-HMGDFDLRVMPGEFSDSEILVLL 368
M F+ F + I ++ H ++YP SK + D +V S S + ++
Sbjct: 652 MEFKFPEPGFLEGVKTKQRAIIKVQHMSFQYPGTSKPQLNDISFQV-----SLSSRIAVI 706
Query: 369 GENGTGKTTFIRMLAGNLEPDDG 437
G NG GK+T I++L G L P G
Sbjct: 707 GPNGAGKSTLIKVLTGELLPTVG 729
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 34.7 bits (76), Expect = 0.009
Identities = 16/25 (64%), Positives = 21/25 (84%)
Frame = +3
Query: 348 SEILVLLGENGTGKTTFIRMLAGNL 422
+E L+L+GE GTGKTT I++LAG L
Sbjct: 467 NEPLLLVGETGTGKTTTIQLLAGLL 491
>SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 736
Score = 33.1 bits (72), Expect = 0.028
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 16/94 (17%)
Frame = +3
Query: 246 TEEEIKRMNHYEYPEMSK------HMGDFDLRVMPG----EFSDSEILV-----LLGENG 380
TEEE++ +E+P + K M D + +PG + D ++ + ++G NG
Sbjct: 499 TEEEVE----FEFPPVEKISPPILQMSDVNFEYVPGHPILKHVDIDVQMDSRIGVVGPNG 554
Query: 381 TGKTTFIRMLAGNLEPDDG-SGQLPQLHISYKPQ 479
GK+T +++L L P G + P+L I+Y Q
Sbjct: 555 AGKSTMLKLLIEQLHPTSGIVSRHPRLRIAYFAQ 588
>SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 618
Score = 32.3 bits (70), Expect = 0.049
Identities = 22/68 (32%), Positives = 35/68 (51%)
Frame = +3
Query: 345 DSEILVLLGENGTGKTTFIRMLAGNLEPDDGSGQLPQLHISYKPQKISPKSQGLVRSLLH 524
DS + ++ G+NGTGK+T + ++ G L P +G+ Y K++ SQ L +
Sbjct: 416 DSRVAIV-GKNGTGKSTLLNLITGLLIPIEGNVS------RYSGLKMAKYSQHSADQLPY 468
Query: 525 DKIRDAYI 548
DK YI
Sbjct: 469 DKSPLEYI 476
Score = 27.5 bits (58), Expect = 1.4
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +3
Query: 363 LLGENGTGKTTFIRMLA 413
LLG+NG+GK+TF+ +A
Sbjct: 106 LLGDNGSGKSTFLESVA 122
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 32.3 bits (70), Expect = 0.049
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +3
Query: 357 LVLLGENGTGKTTFIRMLAGNLEPDDGS 440
+ L+G NG GKTT I+++ ++P GS
Sbjct: 623 VALVGPNGAGKTTLIKLILEKVQPSTGS 650
Score = 26.2 bits (55), Expect = 3.2
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +3
Query: 363 LLGENGTGKTTFIRMLAGNLEPDDGSGQLPQLHISYKPQKIS 488
L+ NG+GK+T + +A L P S L Y P +++
Sbjct: 306 LIAPNGSGKSTLLHAIACGLIPTPSSLDFYLLDREYIPNELT 347
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 31.9 bits (69), Expect = 0.065
Identities = 15/24 (62%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
Frame = +3
Query: 357 LVLLGENGTGKTTFI-RMLAGNLE 425
LVL+G+ GTGKTTF+ R L G E
Sbjct: 12 LVLVGDGGTGKTTFVKRHLTGEFE 35
>SPAC10F6.02c |prp22||ATP-dependent RNA helicase
Prp22|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1168
Score = 30.7 bits (66), Expect = 0.15
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +3
Query: 342 SDSEILVLLGENGTGKTTFI 401
S ++ILVLLGE G+GKTT I
Sbjct: 524 SKNQILVLLGETGSGKTTQI 543
>SPBC1105.15c |htd2||3-hydroxyacyl-ACP dehydratase Htd2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 300
Score = 29.5 bits (63), Expect = 0.35
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +3
Query: 282 YPEMSKHMGDFDLRVMPGEFSDSEILVLLGENG 380
YP+MSK+M F+ R++ F + + + + E G
Sbjct: 244 YPQMSKNMKRFEFRLLSPAFVNQPLRICISETG 276
>SPBC1711.17 |prp16|SPBC17G9.01|ATP-dependent RNA helicase
Prp16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1173
Score = 29.5 bits (63), Expect = 0.35
Identities = 14/55 (25%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +3
Query: 234 AESATEEEIKRMNHYEYPEMSKHMGDFDLRV-MPGEFSDSEILVLLGENGTGKTT 395
+E + +++ + Y E + + F +R + D+++L+++GE G+GKTT
Sbjct: 469 SEQSNKKDTEFARTKSYREQREFLPAFAVREQLLSVIRDNQVLIVVGETGSGKTT 523
>SPBC18H10.10c |cwc16||complexed with Cdc5 protein
Cwf16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 294
Score = 29.5 bits (63), Expect = 0.35
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +3
Query: 297 KHMGDFDLRVMPGEFSDSEILVLLGENGTGKTTFIRML 410
K+ D+ ++P SD + +LL +N GK FIR L
Sbjct: 182 KNRAALDIDILPPSSSDKDKALLLLDNELGKNKFIRKL 219
>SPAC323.04 |||mitochondrial ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 487
Score = 29.1 bits (62), Expect = 0.46
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +3
Query: 336 EFSDSEILVLLGENGTGKTTFIRMLAGNLEP 428
E + + ++G G+G+TTF+R + G+ P
Sbjct: 26 ELARKQNWAIIGNTGSGRTTFLRCIQGSFTP 56
Score = 25.4 bits (53), Expect = 5.7
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 345 DSEILVLLGENGTGKTTFIRMLAGN 419
+ E L G NG+GKTT + + G+
Sbjct: 289 EGERWALTGSNGSGKTTLLAYVVGD 313
>SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar
membrane transporter Hmt1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 830
Score = 29.1 bits (62), Expect = 0.46
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +3
Query: 276 YEYPEMSKHMGDFDLRVMPGEFSDSEILVLLGENGTGKTTFIRMLAGNLEPDDGS 440
+ Y + D + PG+ ++ L+GE+G GK+T +R+L + + GS
Sbjct: 591 FAYDPRKPVLSDINFVAQPGK-----VIALVGESGGGKSTIMRILLRFFDVNSGS 640
>SPCC188.12 |spn6|SPCC584.09|septin Spn6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 380
Score = 28.3 bits (60), Expect = 0.80
Identities = 13/26 (50%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
Frame = +3
Query: 357 LVLLGENGTGKTTFIRML-AGNLEPD 431
++L G +GTGKTTF L A +L+P+
Sbjct: 33 IMLCGASGTGKTTFFNTLFATSLQPE 58
>SPAC644.07 |||Rieske ISP assembly protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 449
Score = 28.3 bits (60), Expect = 0.80
Identities = 18/61 (29%), Positives = 31/61 (50%)
Frame = +3
Query: 249 EEEIKRMNHYEYPEMSKHMGDFDLRVMPGEFSDSEILVLLGENGTGKTTFIRMLAGNLEP 428
E +K+M + + ++ +D R +P +L G G+GKT+F+ LAG L+
Sbjct: 213 ESNVKKMITDDVHDFLRNSQWYDTRGIPYRRG----YLLYGPPGSGKTSFLYALAGELDY 268
Query: 429 D 431
D
Sbjct: 269 D 269
>SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transporter
Bfr1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1530
Score = 28.3 bits (60), Expect = 0.80
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +3
Query: 351 EILVLLGENGTGKTTFIRMLAGNLEPDDGSGQL 449
++ L+GE+G GKTT + +LA ++ +G +
Sbjct: 912 KLTALMGESGAGKTTLLNVLAQRVDTGVVTGDM 944
>SPBC29A10.15 |orc1|orp1, cdc30|origin recognition complex subunit
Orc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 707
Score = 27.9 bits (59), Expect = 1.1
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 357 LVLLGENGTGKTTFIRMLAGNLEPDDGSGQLPQ 455
L + G GTGKT + + NL+ GQLP+
Sbjct: 364 LYISGTPGTGKTATVHEVIWNLQELSREGQLPE 396
>SPAC637.08 |||iron-sulfur cluster assembly ATPase
Nbp35|Schizosaccharomyces pombe|chr 1|||Manual
Length = 317
Score = 27.9 bits (59), Expect = 1.1
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +3
Query: 351 EILVLLGENGTGKTTFIRMLAGNLEPDD 434
+ILVL G+ G GK+TF LA L ++
Sbjct: 62 KILVLSGKGGVGKSTFSSQLAWGLSLEE 89
>SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1336
Score = 27.9 bits (59), Expect = 1.1
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +3
Query: 351 EILVLLGENGTGKTTFIRMLAGNLEPDDGS 440
E++ ++G +G+GK+TFI +L P G+
Sbjct: 463 ELVHIIGPSGSGKSTFISLLLRYFSPTYGN 492
>SPBC19G7.01c |msh2|swi8, mut3, SPBC24C6.12c|MutS protein homolog
2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 982
Score = 27.9 bits (59), Expect = 1.1
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 336 EFSDSEILVLLGENGTGKTTFIRML 410
E SE+L++ G N GK+T+IR +
Sbjct: 710 EHGSSELLIITGPNMGGKSTYIRQV 734
>SPBC16H5.10c |prp43||ATP-dependent RNA helicase
Prp43|Schizosaccharomyces pombe|chr 2|||Manual
Length = 735
Score = 27.5 bits (58), Expect = 1.4
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +3
Query: 339 FSDSEILVLLGENGTGKTTFI 401
+ +++I+V +GE G+GKTT I
Sbjct: 88 YHENQIIVFVGETGSGKTTQI 108
>SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1465
Score = 27.1 bits (57), Expect = 1.9
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = +3
Query: 270 NHYEYPEMSKHMGD--FDLRVMPGEFSDSEILVLLGENGTGKTTFIRMLAGNLEPDDG 437
NHY +K+ D F L + E S E + ++G G GK+T L +EP +G
Sbjct: 1229 NHYS----AKYREDLSFALNNINIEISPREKIGIVGRTGAGKSTLAMALFRIIEPTEG 1282
Score = 25.0 bits (52), Expect = 7.5
Identities = 9/32 (28%), Positives = 18/32 (56%)
Frame = +3
Query: 345 DSEILVLLGENGTGKTTFIRMLAGNLEPDDGS 440
+ E+ + G+ G GK++ + GN+ + GS
Sbjct: 606 NGELTCIFGKVGAGKSSLLEACMGNMYKNSGS 637
>SPAC20G4.01 ||SPAC22F8.13|CCR4-Not complex subunit
Caf16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 280
Score = 27.1 bits (57), Expect = 1.9
Identities = 9/19 (47%), Positives = 16/19 (84%)
Frame = +3
Query: 360 VLLGENGTGKTTFIRMLAG 416
+L+G NG GK+T +++L+G
Sbjct: 34 LLVGANGAGKSTLLKLLSG 52
>SPAC1834.02 |aro1||pentafunctional aromatic polypeptide Aro1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1573
Score = 27.1 bits (57), Expect = 1.9
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +3
Query: 327 MPGEFSDSEILVLLGENGTGKTTFIRMLAGNL 422
+ G S + ++L+G G GKTT +++A L
Sbjct: 856 LKGSISKNASIILIGMRGAGKTTIGKIIAKQL 887
>SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase
Abc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1463
Score = 27.1 bits (57), Expect = 1.9
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 351 EILVLLGENGTGKTTFIRMLAGNLEPDDGSGQLPQLHIS 467
E + ++G G GK+T L +EP G QL ++I+
Sbjct: 1252 EKIGIVGRTGAGKSTLTLALFRLIEPTSGDIQLDDINIT 1290
Score = 25.4 bits (53), Expect = 5.7
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = +3
Query: 351 EILVLLGENGTGKTTFIRMLAGNLEPDDGS 440
E+ ++G+ G GK++ + GN++ GS
Sbjct: 610 ELCCIVGKVGMGKSSLLEACLGNMQKHSGS 639
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 27.1 bits (57), Expect = 1.9
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +3
Query: 348 SEILVLLGENGTGKTTFIRML 410
S + +++G+NG+GKTT I L
Sbjct: 27 SPLTLIVGQNGSGKTTIIECL 47
>SPAC144.14 |klp8||kinesin-like protein Klp8|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 511
Score = 27.1 bits (57), Expect = 1.9
Identities = 16/68 (23%), Positives = 34/68 (50%)
Frame = -1
Query: 358 KISESENSPGITRKSKSPICLDISGYXXXXXXXXXXSVADSATLNTKDSVLNRIFSVGTN 179
+I + + + + S+ I +D++ + S +S++ N SVLNR+ + T+
Sbjct: 243 RIIDPKTRHSLKKASRLQI-IDLASFSKGSQRNESISSFESSSNNKSLSVLNRVIAALTS 301
Query: 178 PSRNILIP 155
++LIP
Sbjct: 302 KKNDVLIP 309
>SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase
Mok11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2397
Score = 26.6 bits (56), Expect = 2.5
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = +2
Query: 353 DFGFTW*EW--YWENNIH*NVSWKSGTG*WFW 442
DFG TW EW Y NN + N+S S + + W
Sbjct: 885 DFGSTWTEWQTYDGNNTYCNLSGWSQSSRYGW 916
>SPAC19D5.05c |||U3 snoRNP-associated protein Imp3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 183
Score = 26.6 bits (56), Expect = 2.5
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = -1
Query: 409 NILMNVVFPVPFSPSKTKISESENSPGIT 323
N+L+ +F + PSK+K+S+ EN ++
Sbjct: 76 NLLLEKLFDMGILPSKSKMSDIENKANVS 104
>SPAC2G11.11c |prh1||ATP-dependent RNA helicase
Prh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 719
Score = 26.6 bits (56), Expect = 2.5
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = +3
Query: 336 EFSDSEILVLLGENGTGKTTFI 401
+ D+ ++V++GE G+GK+T I
Sbjct: 108 QIQDNRVIVVVGETGSGKSTQI 129
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 26.6 bits (56), Expect = 2.5
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = +3
Query: 228 KVAESATEEEIK-RMNHYEYPEMS--KHMGDFDLRVMPGEFSDSEILVLLGENGTGKTTF 398
K ES I+ R + YP K + +L V PG+F + +G +G GK+T
Sbjct: 1109 KKVESLQSAAIEFRQVEFSYPTRRHIKVLRGLNLTVKPGQF-----VAFVGSSGCGKSTT 1163
Query: 399 IRMLAGNLEPDDGS 440
I ++ + D+G+
Sbjct: 1164 IGLIERFYDCDNGA 1177
>SPAC26H5.02c |||DNA replication ATPase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 504
Score = 26.2 bits (55), Expect = 3.2
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 357 LVLLGENGTGKTTFIRMLA 413
++L G GTGKTT R++A
Sbjct: 123 MILWGSAGTGKTTLARLIA 141
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 25.8 bits (54), Expect = 4.3
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +3
Query: 357 LVLLGENGTGKTTFIRML 410
L+L GE+G GKTTF L
Sbjct: 31 LMLCGESGLGKTTFCNTL 48
>SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 905
Score = 25.8 bits (54), Expect = 4.3
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 360 VLLGENGTGKTTFIRMLAGNLEPDD 434
VL+GE G GKT+ LA + DD
Sbjct: 206 VLIGEPGVGKTSIAEGLARRIIDDD 230
>SPAC23C4.14 |alg1||mannosyltransferase complex subunit Alg1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 424
Score = 25.8 bits (54), Expect = 4.3
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +1
Query: 355 FWFYLVRMVLGKQHSLEC*LEIWNRMMVLGSFHSFT 462
F + ++ + LGKQH+ L+I+ + M G++ T
Sbjct: 156 FGYSILALKLGKQHTFVKLLKIYEKYMARGAYAHLT 191
>SPAC20G8.01 |cdc17||ATP-dependent DNA ligase
Cdc17|Schizosaccharomyces pombe|chr 1|||Manual
Length = 768
Score = 25.4 bits (53), Expect = 5.7
Identities = 22/97 (22%), Positives = 42/97 (43%), Gaps = 3/97 (3%)
Frame = +3
Query: 270 NHYEYPEMSKHMGDFDLRVMPGEFSDSEILVLLGENGTGKTTFI--RMLAGNLEPDDGSG 443
+HYE + S+H + G +++V+ G GK T + L G +PD +
Sbjct: 580 SHYEPSKRSRHWLKVKKDYLSGVGDSLDLIVIGAYYGKGKRTSVYGAFLLGCYDPDTETV 639
Query: 444 Q-LPQLHISYKPQKISPKSQGLVRSLLHDKIRDAYIH 551
Q + +L + + + L + ++ K +D Y H
Sbjct: 640 QSICKLGTGFSEEHLETFYNQL-KDIVISKKKDFYAH 675
>SPAPB24D3.09c |pdr1||ABC transporter Pdr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1396
Score = 25.4 bits (53), Expect = 5.7
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +3
Query: 333 GEFSDSEILVLLGENGTGKTTFIRMLA 413
G + + LLGEN +GK+ +R+L+
Sbjct: 782 GYLKKNTLTALLGENKSGKSVLLRILS 808
>SPAC458.03 |||nuclear telomere cap complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 868
Score = 25.4 bits (53), Expect = 5.7
Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Frame = +3
Query: 54 HDLSVLDYLSDFICCLYGVPGAYGVVTMPFS---VREGINIFLDGFVPTENMRFRTESLV 224
H + + + +S + P A+ V M + V + ++ D F+P E + ES++
Sbjct: 391 HGMIMAEVISTYSGVSLSNPLAFDVPIMKTTKAKVLKSLSSLKDEFLPIEILN--DESVI 448
Query: 225 FKVAESATEEEIKRMNHYEYPEMSKH 302
AE++ E+E + H E P +SK+
Sbjct: 449 ---AETSIEKEETNVTHLEKPVISKN 471
>SPAC19A8.11c |||recombination protein Irc6 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 246
Score = 25.0 bits (52), Expect = 7.5
Identities = 8/23 (34%), Positives = 17/23 (73%)
Frame = +3
Query: 354 ILVLLGENGTGKTTFIRMLAGNL 422
+++++G + +GK FI+ L G+L
Sbjct: 3 VILVIGRSNSGKLDFIKALTGSL 25
>SPBC119.15 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 367
Score = 25.0 bits (52), Expect = 7.5
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = +3
Query: 357 LVLLGENGTGKTTFIRMLAGNL 422
++++G G+GKTTF++ L +L
Sbjct: 11 IIVVGMAGSGKTTFMQQLNAHL 32
>SPBC16D10.04c |dna2||DNA replication endonuclease-helicase
Dna2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1398
Score = 24.6 bits (51), Expect = 9.9
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +3
Query: 285 PEMSKHMGDFDLRVMPGEFSDSEILVLLGENGTGKTTFIRMLAGNL 422
PE K + + + + + ++LG GTGKTT I L +L
Sbjct: 927 PEFLKCLNEDQITALKKCHAAEHYSLILGMPGTGKTTTISSLIRSL 972
>SPBC3D6.02 |but2||But2 family protein But2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 390
Score = 24.6 bits (51), Expect = 9.9
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +3
Query: 417 NLEPDDGSGQLPQLHISYKPQKISPKSQGLVR 512
++ P+DGS Q ++S P+K + S+G R
Sbjct: 294 DVTPNDGSAQFVVYNMSGNPKKQTTSSKGPTR 325
>SPBC19C2.01 |cdc28|prp8|ATP-dependent RNA helicase Cdc28
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1055
Score = 24.6 bits (51), Expect = 9.9
Identities = 22/85 (25%), Positives = 38/85 (44%)
Frame = +3
Query: 141 FSVREGINIFLDGFVPTENMRFRTESLVFKVAESATEEEIKRMNHYEYPEMSKHMGDFDL 320
F + I+ LD + EN T+ + E + E K + Y+Y + DL
Sbjct: 377 FDESQQIDFLLDTKLSAENP-VDTDKMTDVKVEKSLESSRKSLPVYQYKD--------DL 427
Query: 321 RVMPGEFSDSEILVLLGENGTGKTT 395
E+ ++L+++ E G+GKTT
Sbjct: 428 LKAINEY---QVLLIVAETGSGKTT 449
>SPAC11E3.14 |||conserved protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 588
Score = 24.6 bits (51), Expect = 9.9
Identities = 15/61 (24%), Positives = 24/61 (39%)
Frame = +3
Query: 105 GVPGAYGVVTMPFSVREGINIFLDGFVPTENMRFRTESLVFKVAESATEEEIKRMNHYEY 284
GV A+ T+ +V + F + + E + AE TEE K H++
Sbjct: 51 GVKSAFSDDTVESAVGRSGSAFYNAILGLEPKAIEEATEALYHAEQVTEERKKHFEHHDR 110
Query: 285 P 287
P
Sbjct: 111 P 111
>SPAC23E2.02 |lsd2|swm2, saf140|histone demethylase SWIRM2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1273
Score = 24.6 bits (51), Expect = 9.9
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +3
Query: 273 HYEYPEMSKHMGD 311
HY++PEM++H D
Sbjct: 49 HYDFPEMTEHHSD 61
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,329,921
Number of Sequences: 5004
Number of extensions: 47977
Number of successful extensions: 221
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 207
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 220
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 231978230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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