Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_G09
         (556 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   2.1  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   2.1  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    23   2.7  
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               22   4.8  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    21   6.3  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    21   8.4  
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    21   8.4  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    21   8.4  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    21   8.4  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +3

Query: 333  GEFSDSEILVLLGENGTGKTTFIRMLAGNLEPDDG 437
            G  S S +  LL      +TTF+    GN+ P +G
Sbjct: 1842 GRSSRSSLRTLLPPISVAETTFVGGNQGNVVPGNG 1876


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +3

Query: 333  GEFSDSEILVLLGENGTGKTTFIRMLAGNLEPDDG 437
            G  S S +  LL      +TTF+    GN+ P +G
Sbjct: 1838 GRSSRSSLRTLLPPISVAETTFVGGNQGNVVPGNG 1872


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -3

Query: 275 VIHTFYLFFGSRFGNFKY*GFS 210
           + H F+ +F  R+GN+   GF+
Sbjct: 212 ITHNFF-YFDPRYGNYNINGFN 232


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -3

Query: 293 HFWIFIVIHTFYLFFG 246
           HF+  +VI   +L+FG
Sbjct: 6   HFFFILVITLIFLYFG 21


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 5/6 (83%), Positives = 5/6 (83%)
 Frame = +2

Query: 116 CLWCCD 133
           C WCCD
Sbjct: 12  CCWCCD 17


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +3

Query: 60  LSVLDYLSDFICCLYGVPGAY 122
           L VL   + FI C +  PGA+
Sbjct: 4   LGVLFIAAWFIACTHSFPGAH 24


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -2

Query: 540 HLLFYHVVNCVLILVTL 490
           +LLF  ++N V ILVT+
Sbjct: 299 YLLFTFIMNTVSILVTV 315


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +3

Query: 60  LSVLDYLSDFICCLYGVPGAY 122
           L VL   + FI C +  PGA+
Sbjct: 4   LGVLFIAAWFIACTHSFPGAH 24


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +3

Query: 60  LSVLDYLSDFICCLYGVPGAY 122
           L VL   + FI C +  PGA+
Sbjct: 4   LGVLFIAAWFIACTHSFPGAH 24


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,097
Number of Sequences: 438
Number of extensions: 2965
Number of successful extensions: 20
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15949830
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)