Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_G05
(576 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067211-11|AAK66019.1| 346|Caenorhabditis elegans Proteasome r... 215 1e-56
Z30662-4|CAA83139.3| 376|Caenorhabditis elegans Hypothetical pr... 37 0.009
Z81076-6|CAB03054.1| 387|Caenorhabditis elegans Hypothetical pr... 32 0.34
Z81076-5|CAB03055.1| 389|Caenorhabditis elegans Hypothetical pr... 32 0.34
Z81076-7|CAB03058.1| 411|Caenorhabditis elegans Hypothetical pr... 30 1.0
Z68215-2|CAA92451.2| 452|Caenorhabditis elegans Hypothetical pr... 30 1.0
Z82069-1|CAB04902.1| 667|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z75952-3|CAB00096.1| 286|Caenorhabditis elegans Hypothetical pr... 29 2.4
U88173-13|AAM15573.1| 1225|Caenorhabditis elegans Hypothetical p... 29 2.4
U88173-12|AAK21388.1| 1339|Caenorhabditis elegans Hypothetical p... 29 2.4
AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical ... 29 2.4
Z75541-3|CAA99855.1| 1425|Caenorhabditis elegans Hypothetical pr... 29 3.1
AL132862-16|CAB60550.1| 305|Caenorhabditis elegans Hypothetical... 29 3.1
AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical... 28 4.1
AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical... 28 4.1
AF067608-11|AAC17656.2| 368|Caenorhabditis elegans Hypothetical... 28 4.1
U29244-19|AAC71098.1| 95|Caenorhabditis elegans Hypothetical p... 27 7.2
AL117204-1|CAB55141.1| 328|Caenorhabditis elegans Hypothetical ... 27 7.2
AF067948-4|AAO25983.1| 756|Caenorhabditis elegans Egl-27 relate... 27 7.2
AF067948-3|AAO25984.1| 870|Caenorhabditis elegans Egl-27 relate... 27 7.2
AF067948-2|AAD34654.1| 870|Caenorhabditis elegans Egl-27 relate... 27 7.2
AF067948-1|AAD34653.1| 1022|Caenorhabditis elegans Egl-27 relate... 27 7.2
Z48582-2|CAA88466.2| 228|Caenorhabditis elegans Hypothetical pr... 27 9.5
>AF067211-11|AAK66019.1| 346|Caenorhabditis elegans Proteasome
regulatory particle,non-atpase-like protein 10 protein.
Length = 346
Score = 215 bits (526), Expect = 1e-56
Identities = 101/168 (60%), Positives = 137/168 (81%), Gaps = 3/168 (1%)
Frame = +2
Query: 65 MVLESTMICVDNSDYMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLTLAN-VEV 241
MV ESTMICVDNS+YMRNGDF PTRLQ+QQDAVNLV K R+NPEN VG+L++AN V+V
Sbjct: 1 MVQESTMICVDNSEYMRNGDFQPTRLQSQQDAVNLVTQCKLRANPENAVGILSMANSVQV 60
Query: 242 LATLTSDVGRILSKLHRVQPNGNINLLTGIRIAHLALKHRQGKNHKMRIVVFVGSPVDTD 421
L++L+++ GR++ K H ++P G N + GI+IAHLALKHRQ +NHKMR+V+F+GSP++
Sbjct: 61 LSSLSTEQGRLMMKNHSIEPFGKCNFIAGIKIAHLALKHRQNRNHKMRVVLFIGSPLEEI 120
Query: 422 E-KELVKLAKRLKKEKVNCDVVSYGE-DSENNPLLTAFVNTLNGKDST 559
E ELVK+AK++KKEKV CDV+ +GE +S+ + + FV+TLNGK+ +
Sbjct: 121 EMNELVKIAKKMKKEKVLCDVIMFGENESDGHEKFSTFVDTLNGKEGS 168
>Z30662-4|CAA83139.3| 376|Caenorhabditis elegans Hypothetical
protein T16H12.4 protein.
Length = 376
Score = 37.1 bits (82), Expect = 0.009
Identities = 32/145 (22%), Positives = 61/145 (42%), Gaps = 6/145 (4%)
Frame = +2
Query: 68 VLESTMICVDNSDYMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLTLAN--VEV 241
++ MI +D S +M + P+R A+ NP +GL+T + +
Sbjct: 61 IMRHVMIVIDCSRFMTSKAMPPSRFVVVMKALQTFLDRFFEQNPIAQIGLITCKDRKADR 120
Query: 242 LATLTSDVGRILSKLHRVQP---NGNINLLTGIRIAHLALKHRQGKNHKMRIVVFVGSPV 412
L +T ++ + L+ + G+ +L +++A LK G H R VV V S +
Sbjct: 121 LTMMTGNIRVLKESLNTLTEAFCGGDFSLQNALQLACANLKGMPG--HVSREVVLVISAL 178
Query: 413 DT-DEKELVKLAKRLKKEKVNCDVV 484
T D + + +K+ + C +
Sbjct: 179 STIDPGNIYSTIETMKRMNIRCSAI 203
>Z81076-6|CAB03054.1| 387|Caenorhabditis elegans Hypothetical
protein F35C5.5b protein.
Length = 387
Score = 31.9 bits (69), Expect = 0.34
Identities = 31/114 (27%), Positives = 56/114 (49%), Gaps = 15/114 (13%)
Frame = +2
Query: 209 VGLLTLANVEVLATLTSDVGR------ILSKLHRVQPNG-----NINLLTGIRIAHLAL- 352
VGL+T N E AT+ +D+ R + S + ++ PN ++ L GI A L
Sbjct: 80 VGLVTY-NTE--ATIQADLNRFQSPDDLFSTVFQILPNDLSTSEDVFLAKGIGAAEQLLA 136
Query: 353 ---KHRQGKNHKMRIVVFVGSPVDTDEKELVKLAKRLKKEKVNCDVVSYGEDSE 505
K+ KN+K ++V+ + D E++ +A+RLK V+ V++ + +
Sbjct: 137 AGRKNNTRKNYKQMVIVYASAYNDEGEEDPRPIAERLKASGVSIATVAFDQTGD 190
>Z81076-5|CAB03055.1| 389|Caenorhabditis elegans Hypothetical
protein F35C5.5a protein.
Length = 389
Score = 31.9 bits (69), Expect = 0.34
Identities = 31/114 (27%), Positives = 56/114 (49%), Gaps = 15/114 (13%)
Frame = +2
Query: 209 VGLLTLANVEVLATLTSDVGR------ILSKLHRVQPNG-----NINLLTGIRIAHLAL- 352
VGL+T N E AT+ +D+ R + S + ++ PN ++ L GI A L
Sbjct: 80 VGLVTY-NTE--ATIQADLNRFQSPDDLFSTVFQILPNDLSTSEDVFLAKGIGAAEQLLA 136
Query: 353 ---KHRQGKNHKMRIVVFVGSPVDTDEKELVKLAKRLKKEKVNCDVVSYGEDSE 505
K+ KN+K ++V+ + D E++ +A+RLK V+ V++ + +
Sbjct: 137 AGRKNNTRKNYKQMVIVYASAYNDEGEEDPRPIAERLKASGVSIATVAFDQTGD 190
>Z81076-7|CAB03058.1| 411|Caenorhabditis elegans Hypothetical
protein F35C5.6 protein.
Length = 411
Score = 30.3 bits (65), Expect = 1.0
Identities = 25/108 (23%), Positives = 49/108 (45%), Gaps = 4/108 (3%)
Frame = +2
Query: 224 LANVEVLATLTSDVGRILSKLHRVQPNGNINLLTGIRIAHLALKHRQGK----NHKMRIV 391
+A++ +L ++ + S L++V + + L GI A L+ + N+K +V
Sbjct: 117 VADLNLLQSIDDLYQSVFSTLNQVSNSDDSFLAKGIGAAENVLQSGRTNGVRSNYKRLVV 176
Query: 392 VFVGSPVDTDEKELVKLAKRLKKEKVNCDVVSYGEDSENNPLLTAFVN 535
V+ + E + + +A RLK V V++ +D + LL N
Sbjct: 177 VYASAYKGEGELDPIPVADRLKSSGVVVSTVAFDQDGD-EALLAGLTN 223
>Z68215-2|CAA92451.2| 452|Caenorhabditis elegans Hypothetical
protein C53B4.2 protein.
Length = 452
Score = 30.3 bits (65), Expect = 1.0
Identities = 16/47 (34%), Positives = 29/47 (61%)
Frame = +2
Query: 326 GIRIAHLALKHRQGKNHKMRIVVFVGSPVDTDEKELVKLAKRLKKEK 466
G++ +++ L +++GK K+ I D D+KE+ KL K+LK+ K
Sbjct: 144 GMKKSNIVLPNQKGKPQKVSI-----KTRDVDQKEMEKLLKKLKENK 185
>Z82069-1|CAB04902.1| 667|Caenorhabditis elegans Hypothetical
protein W04A8.1 protein.
Length = 667
Score = 29.5 bits (63), Expect = 1.8
Identities = 24/95 (25%), Positives = 45/95 (47%), Gaps = 6/95 (6%)
Frame = +2
Query: 230 NVEVLATLTSDVGRILSKLHRVQPNGNINLLTGIRIAHLALKHRQ-GKNHKMRIVVFVGS 406
+V++L S+V L K H + I+ ++ K R G+N K V+F GS
Sbjct: 440 SVQILVPTRSNVINQLQKRHEEDDDDFISDVSAFLQRKTMKKSRNLGENSKNE-VIFTGS 498
Query: 407 PVDTDEKELVK-----LAKRLKKEKVNCDVVSYGE 496
P++ K +V+ ++ + +E+ C V +G+
Sbjct: 499 PIEKKLKTIVRRFKMTISTEIDEERTLCVVSRHGK 533
>Z75952-3|CAB00096.1| 286|Caenorhabditis elegans Hypothetical
protein F55H12.6b protein.
Length = 286
Score = 29.1 bits (62), Expect = 2.4
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 254 TSDVGRILSKLHRVQPNGNIN 316
T+DV R+L K HR+ P IN
Sbjct: 107 TNDVNRVLGKRHRISPTPTIN 127
>U88173-13|AAM15573.1| 1225|Caenorhabditis elegans Hypothetical
protein F46F11.1b protein.
Length = 1225
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -1
Query: 321 KRLMLPFG*TLCSFDSMRPTSLVKVASTSTFASVNKPTLF 202
K+++L FG T+C FD +R V + F+ V T +
Sbjct: 270 KKIVLAFGQTVCGFDLLRANGKSYVCDVNGFSFVKTSTKY 309
>U88173-12|AAK21388.1| 1339|Caenorhabditis elegans Hypothetical
protein F46F11.1a protein.
Length = 1339
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -1
Query: 321 KRLMLPFG*TLCSFDSMRPTSLVKVASTSTFASVNKPTLF 202
K+++L FG T+C FD +R V + F+ V T +
Sbjct: 270 KKIVLAFGQTVCGFDLLRANGKSYVCDVNGFSFVKTSTKY 309
>AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical
protein R52.2 protein.
Length = 1019
Score = 29.1 bits (62), Expect = 2.4
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = +1
Query: 292 SSTEWQHQPFDRN*NCTFGSKAPSRKESQDAHSSFRRLPCRYRRKRTSQTCKATKE 459
S + + +P + TFG + PS++ SS R+ C RR + T A +
Sbjct: 426 SPSRYSREPIRNSQGFTFGRQIPSKQTRYQNQSSSERIHCPTRRVQFGTTAIAESQ 481
>Z75541-3|CAA99855.1| 1425|Caenorhabditis elegans Hypothetical protein
F52B5.3 protein.
Length = 1425
Score = 28.7 bits (61), Expect = 3.1
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -2
Query: 125 NHHFSYNHCYPHRS*YFP 72
NHH+S+N+ YPH + P
Sbjct: 1325 NHHYSHNYSYPHYNIQLP 1342
>AL132862-16|CAB60550.1| 305|Caenorhabditis elegans Hypothetical
protein Y73F8A.22 protein.
Length = 305
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = +2
Query: 311 INLLTGIRIAHLALKHRQGKNHKMRIVVFVGSPVDTDEKELVKLAKRLKKEKVNCDV 481
++L TG + AL H N ++V+ GSP DT+ E + +K CDV
Sbjct: 1 MHLSTGFLVLLTALCHVDSLNVNTKLVLIWGSPNDTEISETYSGSWDECLQKCYCDV 57
>AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical
protein Y57A10A.18b protein.
Length = 1459
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +2
Query: 428 ELVKLAKRLKKEKVNCDVVSYGEDSENNPLLTAFVNTLNGKDSTTGG 568
+L + +R++K V C ++G+ + LT +LNGK + GG
Sbjct: 374 KLFESIERIEKGPVVCTDTTHGKPTSLRQALTGAQKSLNGKMTAKGG 420
>AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical
protein Y57A10A.18a protein.
Length = 1456
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +2
Query: 428 ELVKLAKRLKKEKVNCDVVSYGEDSENNPLLTAFVNTLNGKDSTTGG 568
+L + +R++K V C ++G+ + LT +LNGK + GG
Sbjct: 374 KLFESIERIEKGPVVCTDTTHGKPTSLRQALTGAQKSLNGKMTAKGG 420
>AF067608-11|AAC17656.2| 368|Caenorhabditis elegans Hypothetical
protein B0511.11 protein.
Length = 368
Score = 28.3 bits (60), Expect = 4.1
Identities = 25/88 (28%), Positives = 37/88 (42%)
Frame = +2
Query: 293 VQPNGNINLLTGIRIAHLALKHRQGKNHKMRIVVFVGSPVDTDEKELVKLAKRLKKEKVN 472
V N +I++ LA +++ G K+ F D DEKE++KLA RL K
Sbjct: 114 VYSNPSISVSKNFSTTPLA-ENQAGAFDKLDDDEFEKMTSDVDEKEILKLAPRLLKVAKK 172
Query: 473 CDVVSYGEDSENNPLLTAFVNTLNGKDS 556
+ E N +L F + DS
Sbjct: 173 HAAIEKCLTPEENEVLAKFFSGKQKLDS 200
>U29244-19|AAC71098.1| 95|Caenorhabditis elegans Hypothetical
protein ZK1248.17 protein.
Length = 95
Score = 27.5 bits (58), Expect = 7.2
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = +2
Query: 314 NLLTGIRIAHLALKHRQGKNHKMRIVVFVGSPVDTDEKELVKLAKRLKKEKVNCDVVSYG 493
++ T RI LK++ ++ + G P + KE V LA V+CD ++G
Sbjct: 17 HMTTSTRITSRFLKNKTTNMKRLGVDPPCGVP---EPKEDVLLA-------VSCDAFAFG 66
Query: 494 EDSENNPLLTA-FVNTLNG 547
+D NN +T + NT +G
Sbjct: 67 QDDTNNDRITVEWTNTPDG 85
>AL117204-1|CAB55141.1| 328|Caenorhabditis elegans Hypothetical
protein Y116A8C.1 protein.
Length = 328
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +2
Query: 311 INLLTGIRIAHLALKHRQGKNHKMRIVVFVGSPVDTDEKE 430
++L TG + AL H N ++V+ GSP DT+ E
Sbjct: 1 MHLSTGFLVFLTALSHVDSLNVNTKLVLIWGSPNDTEISE 40
>AF067948-4|AAO25983.1| 756|Caenorhabditis elegans Egl-27 related
protein 1, isoform c protein.
Length = 756
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +2
Query: 407 PVDTDEKELVKLAKRLKKEKVNCDVVSYG-EDSENNPLLTA 526
P D + KE LA+++KKE+ + + ED+EN+ L A
Sbjct: 297 PADREAKEAKVLAEKVKKEEEEAKLKAEAEEDTENDGLTIA 337
>AF067948-3|AAO25984.1| 870|Caenorhabditis elegans Egl-27 related
protein 1, isoform d protein.
Length = 870
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +2
Query: 407 PVDTDEKELVKLAKRLKKEKVNCDVVSYG-EDSENNPLLTA 526
P D + KE LA+++KKE+ + + ED+EN+ L A
Sbjct: 297 PADREAKEAKVLAEKVKKEEEEAKLKAEAEEDTENDGLTIA 337
>AF067948-2|AAD34654.1| 870|Caenorhabditis elegans Egl-27 related
protein 1, isoform b protein.
Length = 870
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +2
Query: 407 PVDTDEKELVKLAKRLKKEKVNCDVVSYG-EDSENNPLLTA 526
P D + KE LA+++KKE+ + + ED+EN+ L A
Sbjct: 297 PADREAKEAKVLAEKVKKEEEEAKLKAEAEEDTENDGLTIA 337
>AF067948-1|AAD34653.1| 1022|Caenorhabditis elegans Egl-27 related
protein 1, isoform a protein.
Length = 1022
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +2
Query: 407 PVDTDEKELVKLAKRLKKEKVNCDVVSYG-EDSENNPLLTA 526
P D + KE LA+++KKE+ + + ED+EN+ L A
Sbjct: 297 PADREAKEAKVLAEKVKKEEEEAKLKAEAEEDTENDGLTIA 337
>Z48582-2|CAA88466.2| 228|Caenorhabditis elegans Hypothetical
protein F27E5.4 protein.
Length = 228
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/57 (22%), Positives = 24/57 (42%)
Frame = +2
Query: 41 IFRK*LFKMVLESTMICVDNSDYMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNV 211
+++ L +++L S C+ D +R +FLP L C + N + V
Sbjct: 64 VYQNKLGRILLRSDATCIPGRDELRTCNFLPAESTVHCSLGKLACEGDLQCNSKFGV 120
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,928,490
Number of Sequences: 27780
Number of extensions: 266624
Number of successful extensions: 813
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 810
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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