BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_G02
(490 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY058567-1|AAL13796.1| 498|Drosophila melanogaster LD25575p pro... 79 2e-15
AE014297-983|AAF54411.1| 498|Drosophila melanogaster CG8286-PA ... 79 2e-15
AY060982-1|AAL28530.1| 403|Drosophila melanogaster GM13664p pro... 30 1.5
AE014297-1679|AAN13566.1| 403|Drosophila melanogaster CG8863-PE... 30 1.5
AE014297-1678|AAN13565.1| 403|Drosophila melanogaster CG8863-PD... 30 1.5
AE014297-1677|AAN13564.1| 403|Drosophila melanogaster CG8863-PC... 30 1.5
AE014297-1676|AAF54940.1| 403|Drosophila melanogaster CG8863-PB... 30 1.5
AE014297-1675|AAF54939.1| 403|Drosophila melanogaster CG8863-PA... 30 1.5
BT001365-1|AAN71120.1| 844|Drosophila melanogaster AT30147p pro... 28 6.0
AY071707-1|AAL49329.1| 1026|Drosophila melanogaster RH22885p pro... 28 6.0
AE014298-2268|AAS65365.1| 1026|Drosophila melanogaster CG16952-P... 28 6.0
AE014298-2267|AAS65364.1| 1026|Drosophila melanogaster CG16952-P... 28 6.0
AE014298-2266|AAF48532.2| 1026|Drosophila melanogaster CG16952-P... 28 6.0
AE014297-1809|AAN13596.1| 844|Drosophila melanogaster CG31533-P... 28 6.0
AE014134-229|AAF51395.3| 350|Drosophila melanogaster CG5001-PA ... 28 6.0
>AY058567-1|AAL13796.1| 498|Drosophila melanogaster LD25575p
protein.
Length = 498
Score = 79.4 bits (187), Expect = 2e-15
Identities = 34/53 (64%), Positives = 41/53 (77%)
Frame = -3
Query: 464 QLLTDPDKRSMFDSGTVPLDPEAQRAGGHGGPFNNPFHHFQHGSPFQFKFHFN 306
++LTDP+KR FD+G PLDPE+ + GG G +PF HFQHGSPFQFKFHFN
Sbjct: 448 EVLTDPEKRRQFDNGEDPLDPESNQRGGFHG--EHPFGHFQHGSPFQFKFHFN 498
>AE014297-983|AAF54411.1| 498|Drosophila melanogaster CG8286-PA
protein.
Length = 498
Score = 79.4 bits (187), Expect = 2e-15
Identities = 34/53 (64%), Positives = 41/53 (77%)
Frame = -3
Query: 464 QLLTDPDKRSMFDSGTVPLDPEAQRAGGHGGPFNNPFHHFQHGSPFQFKFHFN 306
++LTDP+KR FD+G PLDPE+ + GG G +PF HFQHGSPFQFKFHFN
Sbjct: 448 EVLTDPEKRRQFDNGEDPLDPESNQRGGFHG--EHPFGHFQHGSPFQFKFHFN 498
>AY060982-1|AAL28530.1| 403|Drosophila melanogaster GM13664p
protein.
Length = 403
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -3
Query: 464 QLLTDPDKRSMFDSGTVPLDPEAQRAGGHGGPFNNPFHHFQ 342
++L+D DKR ++D G + ++ G G F NP F+
Sbjct: 53 EVLSDADKRQVYDEGG---EAAIKKGGADSGDFRNPMDFFE 90
>AE014297-1679|AAN13566.1| 403|Drosophila melanogaster CG8863-PE,
isoform E protein.
Length = 403
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -3
Query: 464 QLLTDPDKRSMFDSGTVPLDPEAQRAGGHGGPFNNPFHHFQ 342
++L+D DKR ++D G + ++ G G F NP F+
Sbjct: 53 EVLSDADKRQVYDEGG---EAAIKKGGADSGDFRNPMDFFE 90
>AE014297-1678|AAN13565.1| 403|Drosophila melanogaster CG8863-PD,
isoform D protein.
Length = 403
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -3
Query: 464 QLLTDPDKRSMFDSGTVPLDPEAQRAGGHGGPFNNPFHHFQ 342
++L+D DKR ++D G + ++ G G F NP F+
Sbjct: 53 EVLSDADKRQVYDEGG---EAAIKKGGADSGDFRNPMDFFE 90
>AE014297-1677|AAN13564.1| 403|Drosophila melanogaster CG8863-PC,
isoform C protein.
Length = 403
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -3
Query: 464 QLLTDPDKRSMFDSGTVPLDPEAQRAGGHGGPFNNPFHHFQ 342
++L+D DKR ++D G + ++ G G F NP F+
Sbjct: 53 EVLSDADKRQVYDEGG---EAAIKKGGADSGDFRNPMDFFE 90
>AE014297-1676|AAF54940.1| 403|Drosophila melanogaster CG8863-PB,
isoform B protein.
Length = 403
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -3
Query: 464 QLLTDPDKRSMFDSGTVPLDPEAQRAGGHGGPFNNPFHHFQ 342
++L+D DKR ++D G + ++ G G F NP F+
Sbjct: 53 EVLSDADKRQVYDEGG---EAAIKKGGADSGDFRNPMDFFE 90
>AE014297-1675|AAF54939.1| 403|Drosophila melanogaster CG8863-PA,
isoform A protein.
Length = 403
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -3
Query: 464 QLLTDPDKRSMFDSGTVPLDPEAQRAGGHGGPFNNPFHHFQ 342
++L+D DKR ++D G + ++ G G F NP F+
Sbjct: 53 EVLSDADKRQVYDEGG---EAAIKKGGADSGDFRNPMDFFE 90
>BT001365-1|AAN71120.1| 844|Drosophila melanogaster AT30147p
protein.
Length = 844
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/40 (27%), Positives = 16/40 (40%)
Frame = +1
Query: 337 PCWKWWKGLLKGPPCPPARCASGSRGTVPESNIDRLSGSV 456
PC K + + CPP RC T P I ++ +
Sbjct: 383 PCEKVRRKIWNDTECPPCRCTCSKGNTCPHCRIRKMCDDI 422
>AY071707-1|AAL49329.1| 1026|Drosophila melanogaster RH22885p
protein.
Length = 1026
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 373 PPCPPARCASGSRGTVPESNIDRLSGSVSNCTT 471
PP P A C+ TV S + + SV++C T
Sbjct: 786 PPSPAATCSVSRHTTVASSFLSPMGSSVASCGT 818
>AE014298-2268|AAS65365.1| 1026|Drosophila melanogaster CG16952-PC,
isoform C protein.
Length = 1026
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 373 PPCPPARCASGSRGTVPESNIDRLSGSVSNCTT 471
PP P A C+ TV S + + SV++C T
Sbjct: 786 PPSPAATCSVSRHTTVASSFLSPMGSSVASCGT 818
>AE014298-2267|AAS65364.1| 1026|Drosophila melanogaster CG16952-PB,
isoform B protein.
Length = 1026
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 373 PPCPPARCASGSRGTVPESNIDRLSGSVSNCTT 471
PP P A C+ TV S + + SV++C T
Sbjct: 786 PPSPAATCSVSRHTTVASSFLSPMGSSVASCGT 818
>AE014298-2266|AAF48532.2| 1026|Drosophila melanogaster CG16952-PA,
isoform A protein.
Length = 1026
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 373 PPCPPARCASGSRGTVPESNIDRLSGSVSNCTT 471
PP P A C+ TV S + + SV++C T
Sbjct: 786 PPSPAATCSVSRHTTVASSFLSPMGSSVASCGT 818
>AE014297-1809|AAN13596.1| 844|Drosophila melanogaster CG31533-PA
protein.
Length = 844
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/40 (27%), Positives = 16/40 (40%)
Frame = +1
Query: 337 PCWKWWKGLLKGPPCPPARCASGSRGTVPESNIDRLSGSV 456
PC K + + CPP RC T P I ++ +
Sbjct: 383 PCEKVRRKIWNDTECPPCRCTCSKGNTCPHCRIRKMCDDI 422
>AE014134-229|AAF51395.3| 350|Drosophila melanogaster CG5001-PA
protein.
Length = 350
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = -3
Query: 464 QLLTDPDKRSMFDSGTVPLDPEAQRAGG--HGGPFNNPFHHFQHGSP 330
++L+D KR ++D + ++GG +GGP +N F + HG P
Sbjct: 53 EVLSDKSKREVYDK----YGEDGLKSGGTRNGGPSSNSFTYQFHGDP 95
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,754,650
Number of Sequences: 53049
Number of extensions: 377325
Number of successful extensions: 1137
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1098
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1135
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1726192251
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -