Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_G01
(294 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF015899-1|ABM64210.1| 593|Homo sapiens photolyase-like cryptoc... 32 0.38
BC041814-1|AAH41814.1| 593|Homo sapiens cryptochrome 2 (photoly... 32 0.38
AB014558-1|BAA31633.1| 589|Homo sapiens KIAA0658 protein protein. 32 0.38
EF015898-1|ABM64209.1| 586|Homo sapiens photolyase-like cryptoc... 31 0.67
D84657-1|BAA12710.1| 586|Homo sapiens photolyase homolog protein. 31 0.67
D83702-1|BAA12068.1| 586|Homo sapiens photolyase protein. 31 0.67
BC030519-1|AAH30519.1| 586|Homo sapiens cryptochrome 1 (photoly... 31 0.67
BC029485-1|AAH29485.1| 243|Homo sapiens C1q and tumor necrosis ... 28 4.7
AY358383-1|AAQ88749.1| 243|Homo sapiens CTRP5 protein. 28 4.7
AL110261-1|CAB53702.1| 219|Homo sapiens hypothetical protein pr... 28 4.7
AJ862823-2|CAH93522.1| 243|Homo sapiens C1Q TNF related protein... 28 4.7
AF329841-1|AAK17965.1| 243|Homo sapiens complement-c1q tumor ne... 28 4.7
>EF015899-1|ABM64210.1| 593|Homo sapiens photolyase-like
cryptochrome 2 protein.
Length = 593
Score = 31.9 bits (69), Expect = 0.38
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +1
Query: 124 PSKMLGGSVLRFRHGLRLHDNPAMQSAL 207
P SV FR GLRLHDNPA+ +A+
Sbjct: 17 PGTDSASSVHWFRKGLRLHDNPALLAAV 44
>BC041814-1|AAH41814.1| 593|Homo sapiens cryptochrome 2
(photolyase-like) protein.
Length = 593
Score = 31.9 bits (69), Expect = 0.38
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +1
Query: 124 PSKMLGGSVLRFRHGLRLHDNPAMQSAL 207
P SV FR GLRLHDNPA+ +A+
Sbjct: 17 PGTDSASSVHWFRKGLRLHDNPALLAAV 44
>AB014558-1|BAA31633.1| 589|Homo sapiens KIAA0658 protein protein.
Length = 589
Score = 31.9 bits (69), Expect = 0.38
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +1
Query: 124 PSKMLGGSVLRFRHGLRLHDNPAMQSAL 207
P SV FR GLRLHDNPA+ +A+
Sbjct: 13 PGTDSASSVHWFRKGLRLHDNPALLAAV 40
>EF015898-1|ABM64209.1| 586|Homo sapiens photolyase-like
cryptochrome 1 protein.
Length = 586
Score = 31.1 bits (67), Expect = 0.67
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +1
Query: 157 FRHGLRLHDNPAMQSALE 210
FR GLRLHDNPA++ ++
Sbjct: 9 FRKGLRLHDNPALKECIQ 26
>D84657-1|BAA12710.1| 586|Homo sapiens photolyase homolog protein.
Length = 586
Score = 31.1 bits (67), Expect = 0.67
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +1
Query: 157 FRHGLRLHDNPAMQSALE 210
FR GLRLHDNPA++ ++
Sbjct: 9 FRKGLRLHDNPALKECIQ 26
>D83702-1|BAA12068.1| 586|Homo sapiens photolyase protein.
Length = 586
Score = 31.1 bits (67), Expect = 0.67
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +1
Query: 157 FRHGLRLHDNPAMQSALE 210
FR GLRLHDNPA++ ++
Sbjct: 9 FRKGLRLHDNPALKECIQ 26
>BC030519-1|AAH30519.1| 586|Homo sapiens cryptochrome 1
(photolyase-like) protein.
Length = 586
Score = 31.1 bits (67), Expect = 0.67
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +1
Query: 157 FRHGLRLHDNPAMQSALE 210
FR GLRLHDNPA++ ++
Sbjct: 9 FRKGLRLHDNPALKECIQ 26
>BC029485-1|AAH29485.1| 243|Homo sapiens C1q and tumor necrosis
factor related protein 5 protein.
Length = 243
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 7/49 (14%)
Frame = +1
Query: 31 IYYIALYRTLHVVSIYFNVNFAGK-------FYEGLKKPSKMLGGSVLR 156
+YY A++ T++ S+ F++ G+ F+ G KP+ + GG+++R
Sbjct: 150 VYYFAVHATVYRASLQFDLVKNGESIASFFQFFGGWPKPASLSGGAMVR 198
>AY358383-1|AAQ88749.1| 243|Homo sapiens CTRP5 protein.
Length = 243
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 7/49 (14%)
Frame = +1
Query: 31 IYYIALYRTLHVVSIYFNVNFAGK-------FYEGLKKPSKMLGGSVLR 156
+YY A++ T++ S+ F++ G+ F+ G KP+ + GG+++R
Sbjct: 150 VYYFAVHATVYRASLQFDLVKNGESIASFFQFFGGWPKPASLSGGAMVR 198
>AL110261-1|CAB53702.1| 219|Homo sapiens hypothetical protein
protein.
Length = 219
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 7/49 (14%)
Frame = +1
Query: 31 IYYIALYRTLHVVSIYFNVNFAGK-------FYEGLKKPSKMLGGSVLR 156
+YY A++ T++ S+ F++ G+ F+ G KP+ + GG+++R
Sbjct: 126 VYYFAVHATVYRASLQFDLVKNGESIASFFQFFGGWPKPASLSGGAMVR 174
>AJ862823-2|CAH93522.1| 243|Homo sapiens C1Q TNF related protein 5
protein.
Length = 243
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 7/49 (14%)
Frame = +1
Query: 31 IYYIALYRTLHVVSIYFNVNFAGK-------FYEGLKKPSKMLGGSVLR 156
+YY A++ T++ S+ F++ G+ F+ G KP+ + GG+++R
Sbjct: 150 VYYFAVHATVYRASLQFDLVKNGESIASFFQFFGGWPKPASLSGGAMVR 198
>AF329841-1|AAK17965.1| 243|Homo sapiens complement-c1q tumor
necrosis factor-related protein protein.
Length = 243
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 7/49 (14%)
Frame = +1
Query: 31 IYYIALYRTLHVVSIYFNVNFAGK-------FYEGLKKPSKMLGGSVLR 156
+YY A++ T++ S+ F++ G+ F+ G KP+ + GG+++R
Sbjct: 150 VYYFAVHATVYRASLQFDLVKNGESIASFFQFFGGWPKPASLSGGAMVR 198
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,718,299
Number of Sequences: 237096
Number of extensions: 980694
Number of successful extensions: 5664
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 5643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5664
length of database: 76,859,062
effective HSP length: 74
effective length of database: 59,313,958
effective search space used: 1364221034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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