Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_F23
(476 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical... 31 0.43
AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ... 31 0.43
Z98877-6|CAD56617.1| 432|Caenorhabditis elegans Hypothetical pr... 31 0.57
Z98877-5|CAD56616.1| 731|Caenorhabditis elegans Hypothetical pr... 31 0.57
Z98877-4|CAB54473.2| 796|Caenorhabditis elegans Hypothetical pr... 31 0.57
Z98877-3|CAB54472.2| 537|Caenorhabditis elegans Hypothetical pr... 31 0.57
AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical ... 31 0.57
AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical ... 31 0.57
AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical ... 31 0.57
AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein. 31 0.57
Z79696-1|CAB01972.1| 1584|Caenorhabditis elegans Hypothetical pr... 29 1.3
U70856-1|AAB09165.1| 327|Caenorhabditis elegans Hypothetical pr... 28 4.0
Z29116-4|CAA82370.2| 206|Caenorhabditis elegans Hypothetical pr... 27 5.3
U50311-12|AAA92315.1| 169|Caenorhabditis elegans Hypothetical p... 27 5.3
U50311-10|AAA92314.1| 135|Caenorhabditis elegans Inhibitor of s... 27 5.3
>AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 31.1 bits (67), Expect = 0.43
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +3
Query: 90 YTPGPNCGLEPTCAPRSSHSYPKHTCDCWCKPGTY 194
+T G NC CA +S + T C CKPG Y
Sbjct: 711 FTFGKNCRFPCKCARENSEGCDEITGKCRCKPGYY 745
>AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 31.1 bits (67), Expect = 0.43
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +3
Query: 90 YTPGPNCGLEPTCAPRSSHSYPKHTCDCWCKPGTY 194
+T G NC CA +S + T C CKPG Y
Sbjct: 711 FTFGKNCRFPCKCARENSEGCDEITGKCRCKPGYY 745
>Z98877-6|CAD56617.1| 432|Caenorhabditis elegans Hypothetical
protein Y69H2.3d protein.
Length = 432
Score = 30.7 bits (66), Expect = 0.57
Identities = 16/59 (27%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = +3
Query: 66 DVKCRSDEYTPGPNCGLEPTCA-PRSSHSYPKHTCDCWCKPGTYRVIDTNDCVTLEHCH 239
D +C+ +E EPTC P + + C C G +R N CV + C+
Sbjct: 23 DQECKENESFQTCGTACEPTCGLPTPTFCTLQCVMGCQCNSGFFRRTSDNRCVEQKDCN 81
>Z98877-5|CAD56616.1| 731|Caenorhabditis elegans Hypothetical
protein Y69H2.3c protein.
Length = 731
Score = 30.7 bits (66), Expect = 0.57
Identities = 16/59 (27%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = +3
Query: 66 DVKCRSDEYTPGPNCGLEPTCA-PRSSHSYPKHTCDCWCKPGTYRVIDTNDCVTLEHCH 239
D +C+ +E EPTC P + + C C G +R N CV + C+
Sbjct: 23 DQECKENESFQTCGTACEPTCGLPTPTFCTLQCVMGCQCNSGFFRRTSDNRCVEQKDCN 81
>Z98877-4|CAB54473.2| 796|Caenorhabditis elegans Hypothetical
protein Y69H2.3b protein.
Length = 796
Score = 30.7 bits (66), Expect = 0.57
Identities = 16/59 (27%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = +3
Query: 66 DVKCRSDEYTPGPNCGLEPTCA-PRSSHSYPKHTCDCWCKPGTYRVIDTNDCVTLEHCH 239
D +C+ +E EPTC P + + C C G +R N CV + C+
Sbjct: 23 DQECKENESFQTCGTACEPTCGLPTPTFCTLQCVMGCQCNSGFFRRTSDNRCVEQKDCN 81
>Z98877-3|CAB54472.2| 537|Caenorhabditis elegans Hypothetical
protein Y69H2.3a protein.
Length = 537
Score = 30.7 bits (66), Expect = 0.57
Identities = 16/59 (27%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = +3
Query: 66 DVKCRSDEYTPGPNCGLEPTCA-PRSSHSYPKHTCDCWCKPGTYRVIDTNDCVTLEHCH 239
D +C+ +E EPTC P + + C C G +R N CV + C+
Sbjct: 23 DQECKENESFQTCGTACEPTCGLPTPTFCTLQCVMGCQCNSGFFRRTSDNRCVEQKDCN 81
>AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical
protein Y47H9C.4c protein.
Length = 1045
Score = 30.7 bits (66), Expect = 0.57
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +3
Query: 66 DVKCRSDEYTPGPNCGLEPTCAPRSSHSYPKHTCDCWCKPG 188
++ C D Y GPNC + C + T C CKPG
Sbjct: 413 ELACSKDSY--GPNCEKQAMCDWNHASECNPETGSCVCKPG 451
Score = 29.9 bits (64), Expect = 0.99
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +3
Query: 72 KCRSDEYTPGPNCGLEPTCAPRSSHSYPKHTCDCWCKPGTY 194
KC +++Y G +C TC ++ +T C CKPG Y
Sbjct: 370 KCDAEQY--GADCSKTCTCVRENTLMCAPNTGFCRCKPGFY 408
>AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical
protein Y47H9C.4b protein.
Length = 1070
Score = 30.7 bits (66), Expect = 0.57
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +3
Query: 66 DVKCRSDEYTPGPNCGLEPTCAPRSSHSYPKHTCDCWCKPG 188
++ C D Y GPNC + C + T C CKPG
Sbjct: 413 ELACSKDSY--GPNCEKQAMCDWNHASECNPETGSCVCKPG 451
Score = 29.9 bits (64), Expect = 0.99
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +3
Query: 72 KCRSDEYTPGPNCGLEPTCAPRSSHSYPKHTCDCWCKPGTY 194
KC +++Y G +C TC ++ +T C CKPG Y
Sbjct: 370 KCDAEQY--GADCSKTCTCVRENTLMCAPNTGFCRCKPGFY 408
>AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical
protein Y47H9C.4a protein.
Length = 1111
Score = 30.7 bits (66), Expect = 0.57
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +3
Query: 66 DVKCRSDEYTPGPNCGLEPTCAPRSSHSYPKHTCDCWCKPG 188
++ C D Y GPNC + C + T C CKPG
Sbjct: 413 ELACSKDSY--GPNCEKQAMCDWNHASECNPETGSCVCKPG 451
Score = 29.9 bits (64), Expect = 0.99
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +3
Query: 72 KCRSDEYTPGPNCGLEPTCAPRSSHSYPKHTCDCWCKPGTY 194
KC +++Y G +C TC ++ +T C CKPG Y
Sbjct: 370 KCDAEQY--GADCSKTCTCVRENTLMCAPNTGFCRCKPGFY 408
>AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein.
Length = 1111
Score = 30.7 bits (66), Expect = 0.57
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +3
Query: 66 DVKCRSDEYTPGPNCGLEPTCAPRSSHSYPKHTCDCWCKPG 188
++ C D Y GPNC + C + T C CKPG
Sbjct: 413 ELACSKDSY--GPNCEKQAMCDWNHASECNPETGSCVCKPG 451
Score = 29.9 bits (64), Expect = 0.99
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +3
Query: 72 KCRSDEYTPGPNCGLEPTCAPRSSHSYPKHTCDCWCKPGTY 194
KC +++Y G +C TC ++ +T C CKPG Y
Sbjct: 370 KCDAEQY--GADCSKTCTCVRENTLMCAPNTGFCRCKPGFY 408
>Z79696-1|CAB01972.1| 1584|Caenorhabditis elegans Hypothetical protein
F54F3.1 protein.
Length = 1584
Score = 29.5 bits (63), Expect = 1.3
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 3/37 (8%)
Frame = +3
Query: 90 YTPGPNCGLEPTCAPRSSHSYPKH---TCDCWCKPGT 191
Y P NC LEP ++ H +C CKPG+
Sbjct: 1151 YAPATNCNLEPRICHANAQCVMHHDTNAYECICKPGS 1187
>U70856-1|AAB09165.1| 327|Caenorhabditis elegans Hypothetical
protein F57F4.2 protein.
Length = 327
Score = 27.9 bits (59), Expect = 4.0
Identities = 13/49 (26%), Positives = 26/49 (53%)
Frame = +3
Query: 186 GTYRVIDTNDCVTLEHCH*PTRQL*LLLVIDVIRNYLTVVN*LIICLFK 332
G +RVI T + H H R L +L ++ +Y+ ++ ++I +F+
Sbjct: 223 GPHRVIATKNEFLKSHIHSKLRNLMCMLHFFIVMHYIKILKFVLIAIFQ 271
>Z29116-4|CAA82370.2| 206|Caenorhabditis elegans Hypothetical
protein ZK507.4 protein.
Length = 206
Score = 27.5 bits (58), Expect = 5.3
Identities = 11/30 (36%), Positives = 13/30 (43%), Gaps = 2/30 (6%)
Frame = +3
Query: 102 PNCGLE--PTCAPRSSHSYPKHTCDCWCKP 185
PNC + P C + Y H WCKP
Sbjct: 132 PNCNVSVHPHCTRQCKCEYEYHRMQKWCKP 161
>U50311-12|AAA92315.1| 169|Caenorhabditis elegans Hypothetical
protein C25E10.10 protein.
Length = 169
Score = 27.5 bits (58), Expect = 5.3
Identities = 17/56 (30%), Positives = 19/56 (33%), Gaps = 1/56 (1%)
Frame = +3
Query: 72 KCRSDEYTPGPNCGLEPTCAPRSSH-SYPKHTCDCWCKPGTYRVIDTNDCVTLEHC 236
+C DE EPTC + T C CK G R T CV C
Sbjct: 76 ECEGDEELKACGSACEPTCDNENPECDLVCMTNVCQCKKGLVRDSATGKCVEKNKC 131
>U50311-10|AAA92314.1| 135|Caenorhabditis elegans Inhibitor of
serine protease likeprotein protein 2, isoform a
protein.
Length = 135
Score = 27.5 bits (58), Expect = 5.3
Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Frame = +3
Query: 27 VIVLLCLIIFVKADVKCRSDEYTPGPNCGLEPTC--APRS-SHSYPKHTCDCWCKPGTYR 197
++++ C++ A C ++E + EP C P++ + +TCD CK G R
Sbjct: 4 LVIITCIVAVATATKTCEANEELVSCHNTCEPQCGYTPKACTEQCIMNTCD--CKDGFVR 61
Query: 198 VIDTNDCVTLEHC 236
CV + C
Sbjct: 62 -NSLGKCVEVSEC 73
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,399,107
Number of Sequences: 27780
Number of extensions: 177075
Number of successful extensions: 492
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 439
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 492
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 871571276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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