Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_F21
(142 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone este... 21 1.3
AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein. 21 1.3
DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid p... 20 3.1
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 20 3.1
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 20 3.1
AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatas... 20 3.1
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 19 4.1
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 19 4.1
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 19 5.4
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 19 5.4
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 19 5.4
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 19 5.4
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 19 5.4
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 18 9.5
>AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone
esterase protein.
Length = 567
Score = 21.0 bits (42), Expect = 1.3
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -3
Query: 140 YFL*YNYYIP 111
YFL YNY IP
Sbjct: 370 YFLDYNYTIP 379
>AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein.
Length = 567
Score = 21.0 bits (42), Expect = 1.3
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -3
Query: 140 YFL*YNYYIP 111
YFL YNY IP
Sbjct: 370 YFLDYNYTIP 379
>DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid
phosphatase protein.
Length = 373
Score = 19.8 bits (39), Expect = 3.1
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 5/48 (10%)
Frame = -1
Query: 133 YNITIIFRRYN---RNYMTIR*KTGTGSSP-ELKI-SCKVTCPFFFFL 5
Y+ +II +N +Y+ I G S EL++ C+V CP + +L
Sbjct: 278 YSSSIIMELHNIEGTHYVKIVYYLGIPSEARELQLPGCEVLCPLYKYL 325
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 19.8 bits (39), Expect = 3.1
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +1
Query: 4 RGKKKKGMLPYN*SLIQDS 60
RGK+K PY+ S +DS
Sbjct: 382 RGKEKTCYYPYHPSTQEDS 400
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 19.8 bits (39), Expect = 3.1
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +1
Query: 4 RGKKKKGMLPYN*SLIQDS 60
RGK+K PY+ S +DS
Sbjct: 382 RGKEKTCYYPYHPSTQEDS 400
>AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatase
precursor protein.
Length = 388
Score = 19.8 bits (39), Expect = 3.1
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 5/48 (10%)
Frame = -1
Query: 133 YNITIIFRRYN---RNYMTIR*KTGTGSSP-ELKI-SCKVTCPFFFFL 5
Y+ +II +N +Y+ I G S EL++ C+V CP + +L
Sbjct: 293 YSSSIIMELHNIEGTHYVKIVYYLGIPSEARELQLPGCEVLCPLYKYL 340
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 19.4 bits (38), Expect = 4.1
Identities = 7/16 (43%), Positives = 8/16 (50%)
Frame = -1
Query: 133 YNITIIFRRYNRNYMT 86
YN + YN NY T
Sbjct: 92 YNYNNNYNNYNNNYNT 107
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 19.4 bits (38), Expect = 4.1
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +2
Query: 113 EYNSYIIKNN 142
++ +YIIKNN
Sbjct: 487 QFGNYIIKNN 496
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 19.0 bits (37), Expect = 5.4
Identities = 5/6 (83%), Positives = 6/6 (100%)
Frame = -1
Query: 25 CPFFFF 8
CP+FFF
Sbjct: 166 CPYFFF 171
Score = 18.2 bits (35), Expect = 9.5
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = +2
Query: 95 ISIVAAEYNSY 127
+S V++EYN Y
Sbjct: 622 VSPVSSEYNQY 632
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 19.0 bits (37), Expect = 5.4
Identities = 5/6 (83%), Positives = 6/6 (100%)
Frame = -1
Query: 25 CPFFFF 8
CP+FFF
Sbjct: 166 CPYFFF 171
Score = 18.2 bits (35), Expect = 9.5
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = +2
Query: 95 ISIVAAEYNSY 127
+S V++EYN Y
Sbjct: 622 VSPVSSEYNQY 632
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 19.0 bits (37), Expect = 5.4
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -3
Query: 122 YYIPPLQSKLYDNKI 78
YY+ P SKL D ++
Sbjct: 265 YYVTPNLSKLSDPEV 279
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 19.0 bits (37), Expect = 5.4
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -3
Query: 122 YYIPPLQSKLYDNKI 78
YY+ P SKL D ++
Sbjct: 318 YYVTPNLSKLSDPEV 332
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 19.0 bits (37), Expect = 5.4
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +3
Query: 42 IFNSGLEPVP 71
IFNSG P P
Sbjct: 548 IFNSGYRPKP 557
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 18.2 bits (35), Expect = 9.5
Identities = 7/16 (43%), Positives = 8/16 (50%)
Frame = -3
Query: 122 YYIPPLQSKLYDNKIE 75
YY P K+Y K E
Sbjct: 794 YYSPVEDGKIYSEKKE 809
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,782
Number of Sequences: 438
Number of extensions: 782
Number of successful extensions: 16
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 27
effective length of database: 134,517
effective search space used: 2555823
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
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