Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_F20
         (565 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT014913-1|AAT47764.1|  256|Drosophila melanogaster RH21963p pro...   318   2e-87
AY071342-1|AAL48964.1|  256|Drosophila melanogaster RE37829p pro...   318   2e-87
AF098520-1|AAF06828.1|  256|Drosophila melanogaster ribosomal pr...   318   2e-87
AE014296-477|AAF47660.1|  256|Drosophila melanogaster CG1263-PB,...   318   2e-87
AE014296-476|AAF47659.1|  256|Drosophila melanogaster CG1263-PA,...   318   2e-87
BT022891-1|AAY55307.1|  579|Drosophila melanogaster IP12501p pro...   241   3e-64
AY113486-1|AAM29491.1|  294|Drosophila melanogaster RE45450p pro...    35   0.066
AE014296-1910|AAF50091.1|  294|Drosophila melanogaster CG7636-PA...    35   0.066
AY094732-1|AAM11085.1|  651|Drosophila melanogaster GH25972p pro...    34   0.12 
AE014296-2058|AAF49990.2|  651|Drosophila melanogaster CG5718-PA...    34   0.12 
AY095047-1|AAM11375.1|  520|Drosophila melanogaster LD35592p pro...    29   4.3  
AE014134-2288|AAF53251.1|  520|Drosophila melanogaster CG5439-PA...    29   4.3  
AY071037-1|AAL48659.1|  455|Drosophila melanogaster RE12402p pro...    29   5.7  
AE014297-760|AAF54246.1|  455|Drosophila melanogaster CG11737-PA...    29   5.7  
AE014297-2130|AAN13691.1| 1249|Drosophila melanogaster CG3992-PB...    28   7.6  

>BT014913-1|AAT47764.1|  256|Drosophila melanogaster RH21963p
           protein.
          Length = 256

 Score =  318 bits (782), Expect = 2e-87
 Identities = 147/180 (81%), Positives = 164/180 (91%), Gaps = 1/180 (0%)
 Frame = +2

Query: 29  MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGQGT-LTV 205
           MGRVIRAQRKGAGSVF +H KKRKGA KLRSLD+AER GYI+GVVKDIIHDPG+G  L V
Sbjct: 1   MGRVIRAQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAV 60

Query: 206 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 385
           VHFRDPY++K RKELFIAPEG++TGQFVYCG+KATL++GNVMP+  MPEGTI+CNLEEK 
Sbjct: 61  VHFRDPYRYKIRKELFIAPEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKT 120

Query: 386 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPIL 565
           GDRGRLAR SGN+ATVI HN D K+TRVKLPSGAKKV+PS+NR MVGIVAGGGRIDKPIL
Sbjct: 121 GDRGRLARTSGNYATVIAHNQDTKKTRVKLPSGAKKVVPSANRAMVGIVAGGGRIDKPIL 180


>AY071342-1|AAL48964.1|  256|Drosophila melanogaster RE37829p
           protein.
          Length = 256

 Score =  318 bits (782), Expect = 2e-87
 Identities = 147/180 (81%), Positives = 164/180 (91%), Gaps = 1/180 (0%)
 Frame = +2

Query: 29  MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGQGT-LTV 205
           MGRVIRAQRKGAGSVF +H KKRKGA KLRSLD+AER GYI+GVVKDIIHDPG+G  L V
Sbjct: 1   MGRVIRAQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAV 60

Query: 206 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 385
           VHFRDPY++K RKELFIAPEG++TGQFVYCG+KATL++GNVMP+  MPEGTI+CNLEEK 
Sbjct: 61  VHFRDPYRYKIRKELFIAPEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKT 120

Query: 386 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPIL 565
           GDRGRLAR SGN+ATVI HN D K+TRVKLPSGAKKV+PS+NR MVGIVAGGGRIDKPIL
Sbjct: 121 GDRGRLARTSGNYATVIAHNQDTKKTRVKLPSGAKKVVPSANRAMVGIVAGGGRIDKPIL 180


>AF098520-1|AAF06828.1|  256|Drosophila melanogaster ribosomal
           protein L8 protein.
          Length = 256

 Score =  318 bits (782), Expect = 2e-87
 Identities = 147/180 (81%), Positives = 164/180 (91%), Gaps = 1/180 (0%)
 Frame = +2

Query: 29  MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGQGT-LTV 205
           MGRVIRAQRKGAGSVF +H KKRKGA KLRSLD+AER GYI+GVVKDIIHDPG+G  L V
Sbjct: 1   MGRVIRAQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAV 60

Query: 206 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 385
           VHFRDPY++K RKELFIAPEG++TGQFVYCG+KATL++GNVMP+  MPEGTI+CNLEEK 
Sbjct: 61  VHFRDPYRYKIRKELFIAPEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKT 120

Query: 386 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPIL 565
           GDRGRLAR SGN+ATVI HN D K+TRVKLPSGAKKV+PS+NR MVGIVAGGGRIDKPIL
Sbjct: 121 GDRGRLARTSGNYATVIAHNQDTKKTRVKLPSGAKKVVPSANRAMVGIVAGGGRIDKPIL 180


>AE014296-477|AAF47660.1|  256|Drosophila melanogaster CG1263-PB,
           isoform B protein.
          Length = 256

 Score =  318 bits (782), Expect = 2e-87
 Identities = 147/180 (81%), Positives = 164/180 (91%), Gaps = 1/180 (0%)
 Frame = +2

Query: 29  MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGQGT-LTV 205
           MGRVIRAQRKGAGSVF +H KKRKGA KLRSLD+AER GYI+GVVKDIIHDPG+G  L V
Sbjct: 1   MGRVIRAQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAV 60

Query: 206 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 385
           VHFRDPY++K RKELFIAPEG++TGQFVYCG+KATL++GNVMP+  MPEGTI+CNLEEK 
Sbjct: 61  VHFRDPYRYKIRKELFIAPEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKT 120

Query: 386 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPIL 565
           GDRGRLAR SGN+ATVI HN D K+TRVKLPSGAKKV+PS+NR MVGIVAGGGRIDKPIL
Sbjct: 121 GDRGRLARTSGNYATVIAHNQDTKKTRVKLPSGAKKVVPSANRAMVGIVAGGGRIDKPIL 180


>AE014296-476|AAF47659.1|  256|Drosophila melanogaster CG1263-PA,
           isoform A protein.
          Length = 256

 Score =  318 bits (782), Expect = 2e-87
 Identities = 147/180 (81%), Positives = 164/180 (91%), Gaps = 1/180 (0%)
 Frame = +2

Query: 29  MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGQGT-LTV 205
           MGRVIRAQRKGAGSVF +H KKRKGA KLRSLD+AER GYI+GVVKDIIHDPG+G  L V
Sbjct: 1   MGRVIRAQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAV 60

Query: 206 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 385
           VHFRDPY++K RKELFIAPEG++TGQFVYCG+KATL++GNVMP+  MPEGTI+CNLEEK 
Sbjct: 61  VHFRDPYRYKIRKELFIAPEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKT 120

Query: 386 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPIL 565
           GDRGRLAR SGN+ATVI HN D K+TRVKLPSGAKKV+PS+NR MVGIVAGGGRIDKPIL
Sbjct: 121 GDRGRLARTSGNYATVIAHNQDTKKTRVKLPSGAKKVVPSANRAMVGIVAGGGRIDKPIL 180


>BT022891-1|AAY55307.1|  579|Drosophila melanogaster IP12501p
           protein.
          Length = 579

 Score =  241 bits (591), Expect = 3e-64
 Identities = 109/135 (80%), Positives = 123/135 (91%), Gaps = 1/135 (0%)
 Frame = +2

Query: 164 KDIIHDPGQGT-LTVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVG 340
           KDIIHDPG+G  L VVHFRDPY++K RKELFIAPEG++TGQFVYCG+KATL++GNVMP+ 
Sbjct: 1   KDIIHDPGRGAPLAVVHFRDPYRYKIRKELFIAPEGMHTGQFVYCGRKATLQIGNVMPLS 60

Query: 341 AMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGM 520
            MPEGTI+CNLEEK GDRGRLAR SGN+ATVI HN D K+TRVKLPSGAKKV+PS+NR M
Sbjct: 61  QMPEGTIICNLEEKTGDRGRLARTSGNYATVIAHNQDTKKTRVKLPSGAKKVVPSANRAM 120

Query: 521 VGIVAGGGRIDKPIL 565
           VGIVAGGGRIDKPIL
Sbjct: 121 VGIVAGGGRIDKPIL 135


>AY113486-1|AAM29491.1|  294|Drosophila melanogaster RE45450p
           protein.
          Length = 294

 Score = 35.1 bits (77), Expect = 0.066
 Identities = 19/54 (35%), Positives = 30/54 (55%)
 Frame = +2

Query: 320 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPS 481
           G+  P+GA+P GT +  LE+  G    L  A+G F T++      ++  V+LPS
Sbjct: 161 GDAYPLGALPVGTRIHCLEKNPGQMCHLIHAAGTFGTIL--RKFDEKVVVQLPS 212


>AE014296-1910|AAF50091.1|  294|Drosophila melanogaster CG7636-PA
           protein.
          Length = 294

 Score = 35.1 bits (77), Expect = 0.066
 Identities = 19/54 (35%), Positives = 30/54 (55%)
 Frame = +2

Query: 320 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPS 481
           G+  P+GA+P GT +  LE+  G    L  A+G F T++      ++  V+LPS
Sbjct: 161 GDAYPLGALPVGTRIHCLEKNPGQMCHLIHAAGTFGTIL--RKFDEKVVVQLPS 212


>AY094732-1|AAM11085.1|  651|Drosophila melanogaster GH25972p
           protein.
          Length = 651

 Score = 34.3 bits (75), Expect = 0.12
 Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
 Frame = -1

Query: 475 KLYSRTFGVRIVTYNCGKIARGASQSSSIT-HLFFQITHNCTFRHSTHRHYIANF 314
           K+Y R FG + + Y  G +AR A   +  T H      +  T +HS   HY  ++
Sbjct: 152 KIYQRPFGGQTLDYGKGGVARRACACADRTGHALIHTLYGQTLKHSDSCHYFVDY 206


>AE014296-2058|AAF49990.2|  651|Drosophila melanogaster CG5718-PA
           protein.
          Length = 651

 Score = 34.3 bits (75), Expect = 0.12
 Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
 Frame = -1

Query: 475 KLYSRTFGVRIVTYNCGKIARGASQSSSIT-HLFFQITHNCTFRHSTHRHYIANF 314
           K+Y R FG + + Y  G +AR A   +  T H      +  T +HS   HY  ++
Sbjct: 152 KIYQRPFGGQTLDYGKGGVARRACACADRTGHALIHTLYGQTLKHSDSCHYFVDY 206


>AY095047-1|AAM11375.1|  520|Drosophila melanogaster LD35592p
           protein.
          Length = 520

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 11/37 (29%), Positives = 16/37 (43%)
 Frame = +1

Query: 373 GRKDG*SRTTGSRLWQFCHSYRSQSGRQTYASKASIW 483
           G   G S    +  W+FC ++ +   RQ Y     IW
Sbjct: 101 GNAGGGSNNNDATFWEFCQTHLTPHERQRYMDLKQIW 137


>AE014134-2288|AAF53251.1|  520|Drosophila melanogaster CG5439-PA
           protein.
          Length = 520

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 11/37 (29%), Positives = 16/37 (43%)
 Frame = +1

Query: 373 GRKDG*SRTTGSRLWQFCHSYRSQSGRQTYASKASIW 483
           G   G S    +  W+FC ++ +   RQ Y     IW
Sbjct: 101 GNAGGGSNNNDATFWEFCQTHLTPHERQRYMDLKQIW 137


>AY071037-1|AAL48659.1|  455|Drosophila melanogaster RE12402p
           protein.
          Length = 455

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
 Frame = -1

Query: 424 KIARGASQSSS--ITHLFFQITHNCTFRHSTHRH--YIANF*SCFLATVNKL 281
           K   G  QS++  +T+ +  I +NC  RH   R+  Y   F  CFLA+ + +
Sbjct: 67  KTLLGIIQSTAFLVTNAYTFILYNCALRHMLGRYNFYTVAFVPCFLASFSAI 118


>AE014297-760|AAF54246.1|  455|Drosophila melanogaster CG11737-PA
           protein.
          Length = 455

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
 Frame = -1

Query: 424 KIARGASQSSS--ITHLFFQITHNCTFRHSTHRH--YIANF*SCFLATVNKL 281
           K   G  QS++  +T+ +  I +NC  RH   R+  Y   F  CFLA+ + +
Sbjct: 67  KTLLGIIQSTAFLVTNAYTFILYNCALRHMLGRYNFYTVAFVPCFLASFSAI 118


>AE014297-2130|AAN13691.1| 1249|Drosophila melanogaster CG3992-PB,
           isoform B protein.
          Length = 1249

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 292 LWQESNSRSWQCNACGCY 345
           LW+  N+  + CNACG Y
Sbjct: 744 LWRRDNTGHYLCNACGLY 761


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,912,003
Number of Sequences: 53049
Number of extensions: 666925
Number of successful extensions: 1746
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1647
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1740
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2193288294
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)