Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_F18
(206 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY113211-1|AAM29216.1| 203|Drosophila melanogaster AT06648p pro... 30 0.51
AE014298-1593|AAF48029.1| 203|Drosophila melanogaster CG11756-P... 30 0.51
X57475-1|CAA40713.1| 700|Drosophila melanogaster non-claret di... 28 2.1
X52814-1|CAA36998.1| 700|Drosophila melanogaster claret segreg... 28 2.1
M33932-1|AAA28716.1| 685|Drosophila melanogaster protein ( D.me... 28 2.1
AY729989-1|AAV34672.1| 535|Drosophila melanogaster kinesin-like... 28 2.1
AY058596-1|AAL13825.1| 700|Drosophila melanogaster LD29131p pro... 28 2.1
AE014297-4446|AAF56942.1| 700|Drosophila melanogaster CG7831-PA... 28 2.1
AE014135-88|AAN06496.1| 759|Drosophila melanogaster CG11533-PB,... 26 8.3
AE014135-87|AAN06495.1| 915|Drosophila melanogaster CG11533-PC,... 26 8.3
AE014135-86|AAF59340.2| 1014|Drosophila melanogaster CG11533-PA,... 26 8.3
>AY113211-1|AAM29216.1| 203|Drosophila melanogaster AT06648p
protein.
Length = 203
Score = 29.9 bits (64), Expect = 0.51
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +3
Query: 24 KFSSRRRFPPLTFSTFSILQRGRNLCGR 107
K ++RR+ PP+ ST S++ GR+ GR
Sbjct: 28 KLAARRKSPPVNISTRSVINGGRSANGR 55
>AE014298-1593|AAF48029.1| 203|Drosophila melanogaster CG11756-PA
protein.
Length = 203
Score = 29.9 bits (64), Expect = 0.51
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +3
Query: 24 KFSSRRRFPPLTFSTFSILQRGRNLCGR 107
K ++RR+ PP+ ST S++ GR+ GR
Sbjct: 28 KLAARRKSPPVNISTRSVINGGRSANGR 55
>X57475-1|CAA40713.1| 700|Drosophila melanogaster non-claret
disjunctional (ncd)kinesin-related microtubule motor
protein protein.
Length = 700
Score = 27.9 bits (59), Expect = 2.1
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -1
Query: 182 RPTSWKDFNEVMGLPRYAVFPAVPIAPAKVS 90
R S D NE+ G R A P++P P+KVS
Sbjct: 93 RSRSACDINELRGNKRTAAAPSLPSIPSKVS 123
>X52814-1|CAA36998.1| 700|Drosophila melanogaster claret
segregational product,claret disjunctin protein.
Length = 700
Score = 27.9 bits (59), Expect = 2.1
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -1
Query: 182 RPTSWKDFNEVMGLPRYAVFPAVPIAPAKVS 90
R S D NE+ G R A P++P P+KVS
Sbjct: 93 RSRSACDINELRGNKRTAAAPSLPSIPSKVS 123
>M33932-1|AAA28716.1| 685|Drosophila melanogaster protein (
D.melanogaster non-claretdisjunctional protein (ncd)
mRNA, complete cds. ).
Length = 685
Score = 27.9 bits (59), Expect = 2.1
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -1
Query: 182 RPTSWKDFNEVMGLPRYAVFPAVPIAPAKVS 90
R S D NE+ G R A P++P P+KVS
Sbjct: 78 RSRSACDINELRGNKRTAAAPSLPSIPSKVS 108
>AY729989-1|AAV34672.1| 535|Drosophila melanogaster kinesin-like
motor protein protein.
Length = 535
Score = 27.9 bits (59), Expect = 2.1
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -1
Query: 182 RPTSWKDFNEVMGLPRYAVFPAVPIAPAKVS 90
R S D NE+ G R A P++P P+KVS
Sbjct: 93 RSRSACDINELRGNKRTAAAPSLPSIPSKVS 123
>AY058596-1|AAL13825.1| 700|Drosophila melanogaster LD29131p
protein.
Length = 700
Score = 27.9 bits (59), Expect = 2.1
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -1
Query: 182 RPTSWKDFNEVMGLPRYAVFPAVPIAPAKVS 90
R S D NE+ G R A P++P P+KVS
Sbjct: 93 RSRSACDINELRGNKRTAAAPSLPSIPSKVS 123
>AE014297-4446|AAF56942.1| 700|Drosophila melanogaster CG7831-PA
protein.
Length = 700
Score = 27.9 bits (59), Expect = 2.1
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -1
Query: 182 RPTSWKDFNEVMGLPRYAVFPAVPIAPAKVS 90
R S D NE+ G R A P++P P+KVS
Sbjct: 93 RSRSACDINELRGNKRTAAAPSLPSIPSKVS 123
>AE014135-88|AAN06496.1| 759|Drosophila melanogaster CG11533-PB,
isoform B protein.
Length = 759
Score = 25.8 bits (54), Expect = 8.3
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +1
Query: 70 SQFSNAGETFAGAMGTAGNTA 132
SQ N+G T GA+G NTA
Sbjct: 561 SQRINSGSTIGGAVGNGSNTA 581
>AE014135-87|AAN06495.1| 915|Drosophila melanogaster CG11533-PC,
isoform C protein.
Length = 915
Score = 25.8 bits (54), Expect = 8.3
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +1
Query: 70 SQFSNAGETFAGAMGTAGNTA 132
SQ N+G T GA+G NTA
Sbjct: 717 SQRINSGSTIGGAVGNGSNTA 737
>AE014135-86|AAF59340.2| 1014|Drosophila melanogaster CG11533-PA,
isoform A protein.
Length = 1014
Score = 25.8 bits (54), Expect = 8.3
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +1
Query: 70 SQFSNAGETFAGAMGTAGNTA 132
SQ N+G T GA+G NTA
Sbjct: 816 SQRINSGSTIGGAVGNGSNTA 836
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,160,294
Number of Sequences: 53049
Number of extensions: 185625
Number of successful extensions: 417
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 412
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 417
length of database: 24,988,368
effective HSP length: 48
effective length of database: 22,442,016
effective search space used: 448840320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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