Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_F18
(206 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46787-11|CAA86750.1| 610|Caenorhabditis elegans Hypothetical p... 27 1.4
U67951-2|AAB07570.2| 302|Caenorhabditis elegans Regulator of fu... 27 2.4
U67951-1|AAQ65207.1| 315|Caenorhabditis elegans Regulator of fu... 27 2.4
AY115477-1|AAM55473.1| 303|Caenorhabditis elegans zinc finger p... 27 2.4
AL033514-4|CAA22094.2| 827|Caenorhabditis elegans Hypothetical ... 25 5.6
U28739-8|AAB93452.2| 419|Caenorhabditis elegans Hypothetical pr... 25 7.4
AC024859-2|AAK29971.2| 502|Caenorhabditis elegans Set (trithora... 25 7.4
Z81497-6|CAB04082.2| 604|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z78061-3|CAB60286.1| 662|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z75953-5|CAB00102.2| 604|Caenorhabditis elegans Hypothetical pr... 25 9.7
U42842-3|AAA83593.1| 449|Caenorhabditis elegans Intestinal acid... 25 9.7
AL132952-2|CAB63380.1| 190|Caenorhabditis elegans Hypothetical ... 25 9.7
AL117200-16|CAB60587.1| 662|Caenorhabditis elegans Hypothetical... 25 9.7
AF025467-8|ABR92604.1| 443|Caenorhabditis elegans X-box promote... 25 9.7
AF025467-7|AAB71036.2| 485|Caenorhabditis elegans X-box promote... 25 9.7
AC092690-1|AAK73856.2| 427|Caenorhabditis elegans Hypothetical ... 25 9.7
>Z46787-11|CAA86750.1| 610|Caenorhabditis elegans Hypothetical
protein C16C10.12 protein.
Length = 610
Score = 27.5 bits (58), Expect = 1.4
Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +1
Query: 121 GNTAYLGSPITSLKSFQLVGR-IPKMFH 201
G TA++G+P S+K F G IPK+F+
Sbjct: 253 GKTAFMGTPHESVKFFADCGHPIPKLFN 280
>U67951-2|AAB07570.2| 302|Caenorhabditis elegans Regulator of
fusion protein 2,isoform a protein.
Length = 302
Score = 26.6 bits (56), Expect = 2.4
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 29 FFPEKVPPFNVFNXLNSPTREKPLRALWE 115
F P +V PF N L S +K ++ LWE
Sbjct: 47 FLPAQVDPFIYPNTLGSYGGDKQVQCLWE 75
>U67951-1|AAQ65207.1| 315|Caenorhabditis elegans Regulator of
fusion protein 2,isoform b protein.
Length = 315
Score = 26.6 bits (56), Expect = 2.4
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 29 FFPEKVPPFNVFNXLNSPTREKPLRALWE 115
F P +V PF N L S +K ++ LWE
Sbjct: 60 FLPAQVDPFIYPNTLGSYGGDKQVQCLWE 88
>AY115477-1|AAM55473.1| 303|Caenorhabditis elegans zinc finger
protein REF-2 protein.
Length = 303
Score = 26.6 bits (56), Expect = 2.4
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 29 FFPEKVPPFNVFNXLNSPTREKPLRALWE 115
F P +V PF N L S +K ++ LWE
Sbjct: 48 FLPAQVDPFIYPNTLGSYGGDKQVQCLWE 76
>AL033514-4|CAA22094.2| 827|Caenorhabditis elegans Hypothetical
protein Y75B8A.3 protein.
Length = 827
Score = 25.4 bits (53), Expect = 5.6
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +3
Query: 87 GRNLCGRYGNGGKHCVPGKSHYFVKILPTGWTNT 188
GRN G K G+ YF+ + T WTN+
Sbjct: 667 GRNTVPDTGANWKPVFKGQDMYFITMSETIWTNS 700
>U28739-8|AAB93452.2| 419|Caenorhabditis elegans Hypothetical
protein C17G10.2 protein.
Length = 419
Score = 25.0 bits (52), Expect = 7.4
Identities = 7/21 (33%), Positives = 12/21 (57%)
Frame = -1
Query: 170 WKDFNEVMGLPRYAVFPAVPI 108
W DF V+ +P Y + +P+
Sbjct: 373 WNDFKSVLSMPGYQIKQGLPV 393
>AC024859-2|AAK29971.2| 502|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 27
protein.
Length = 502
Score = 25.0 bits (52), Expect = 7.4
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +1
Query: 97 FAGAMGTAGNTAYLGSPITSLKSFQLVGRIPK 192
+A +G A N +GS T+ S Q G IPK
Sbjct: 80 WADGVGIARNNVTIGSTKTAGLSLQATGPIPK 111
>Z81497-6|CAB04082.2| 604|Caenorhabditis elegans Hypothetical
protein F10C2.3 protein.
Length = 604
Score = 24.6 bits (51), Expect = 9.7
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +2
Query: 32 FPEKVPPFNVFNXLNSPTREKPL 100
+ E P FN+FN L+ ++KP+
Sbjct: 269 YAEDYPGFNLFNYLSKGFKKKPV 291
>Z78061-3|CAB60286.1| 662|Caenorhabditis elegans Hypothetical
protein C48G7.3 protein.
Length = 662
Score = 24.6 bits (51), Expect = 9.7
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 158 NEVMGLPRYAVFPAVPI 108
+E +G RYA FP VP+
Sbjct: 572 DEAVGCVRYATFPGVPM 588
>Z75953-5|CAB00102.2| 604|Caenorhabditis elegans Hypothetical
protein F10C2.3 protein.
Length = 604
Score = 24.6 bits (51), Expect = 9.7
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +2
Query: 32 FPEKVPPFNVFNXLNSPTREKPL 100
+ E P FN+FN L+ ++KP+
Sbjct: 269 YAEDYPGFNLFNYLSKGFKKKPV 291
>U42842-3|AAA83593.1| 449|Caenorhabditis elegans Intestinal acid
phosphatase protein1 protein.
Length = 449
Score = 24.6 bits (51), Expect = 9.7
Identities = 13/52 (25%), Positives = 24/52 (46%)
Frame = +3
Query: 24 KFSSRRRFPPLTFSTFSILQRGRNLCGRYGNGGKHCVPGKSHYFVKILPTGW 179
K+++++ + T +I+ NL G+YG PG + V P G+
Sbjct: 94 KYNAKQIYVRSTDVNRTIISAMSNLLGQYGQNDNSSTPGLDYPDVDGWPAGY 145
>AL132952-2|CAB63380.1| 190|Caenorhabditis elegans Hypothetical
protein Y51H4A.2 protein.
Length = 190
Score = 24.6 bits (51), Expect = 9.7
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2
Query: 29 FFPEKVPPFNVFNXLNSPTREKPLRALWER 118
FFP+K+ PF + + +P + +RA ER
Sbjct: 151 FFPKKITPFRLLGDIPAPLK-LSVRAAAER 179
>AL117200-16|CAB60587.1| 662|Caenorhabditis elegans Hypothetical
protein C48G7.3 protein.
Length = 662
Score = 24.6 bits (51), Expect = 9.7
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 158 NEVMGLPRYAVFPAVPI 108
+E +G RYA FP VP+
Sbjct: 572 DEAVGCVRYATFPGVPM 588
>AF025467-8|ABR92604.1| 443|Caenorhabditis elegans X-box promoter
element regulatedprotein 7, isoform b protein.
Length = 443
Score = 24.6 bits (51), Expect = 9.7
Identities = 17/48 (35%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
Frame = +3
Query: 9 FVLSLKFSSRRR-FPPLTFSTFSILQR-GRNLCGRYGNGGKHCVPGKS 146
+ L F SR F PL F + GR YG+G PGKS
Sbjct: 279 YFLEFVFESRNTDFCPLLMLRFMAVDYWGRQYIAGYGSGYVSLTPGKS 326
>AF025467-7|AAB71036.2| 485|Caenorhabditis elegans X-box promoter
element regulatedprotein 7, isoform a protein.
Length = 485
Score = 24.6 bits (51), Expect = 9.7
Identities = 17/48 (35%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
Frame = +3
Query: 9 FVLSLKFSSRRR-FPPLTFSTFSILQR-GRNLCGRYGNGGKHCVPGKS 146
+ L F SR F PL F + GR YG+G PGKS
Sbjct: 279 YFLEFVFESRNTDFCPLLMLRFMAVDYWGRQYIAGYGSGYVSLTPGKS 326
>AC092690-1|AAK73856.2| 427|Caenorhabditis elegans Hypothetical
protein BE0003N10.2 protein.
Length = 427
Score = 24.6 bits (51), Expect = 9.7
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +2
Query: 35 PEKVPPFNVFNXLNSPTREKPLRALWERRETLRTWE 142
P+++ PF+V L +E R+ ER +R W+
Sbjct: 380 PQQLIPFSVHKQLLVAYQETNQRSTHERERQIRCWK 415
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,157,639
Number of Sequences: 27780
Number of extensions: 93426
Number of successful extensions: 197
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 197
length of database: 12,740,198
effective HSP length: 48
effective length of database: 11,406,758
effective search space used: 228135160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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