Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_F17
         (502 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF231134-1|AAF36977.1|  472|Drosophila melanogaster cyclin-depen...    29   3.5  
AE014134-1830|AAF52906.1|  472|Drosophila melanogaster CG5387-PA...    29   3.5  
X51549-1|CAA35924.1| 1394|Drosophila melanogaster protein ( Dros...    29   4.7  
BT021311-1|AAX33459.1|  523|Drosophila melanogaster RE14763p pro...    29   4.7  
AJ133103-1|CAB63452.1|  897|Drosophila melanogaster RFX transcri...    29   4.7  
AE014297-1144|AAF54526.2|  897|Drosophila melanogaster CG6312-PA...    29   4.7  
AE014296-2991|AAN11688.1| 1355|Drosophila melanogaster CG8127-PA...    29   4.7  
BT023706-1|AAY85106.1|  541|Drosophila melanogaster IP01347p pro...    28   8.2  
BT022164-1|AAY51558.1|  541|Drosophila melanogaster IP01345p pro...    28   8.2  
AF212313-1|AAF32281.1|  541|Drosophila melanogaster senseless pr...    28   8.2  
AF212312-1|AAF32280.1|  541|Drosophila melanogaster senseless pr...    28   8.2  
AE014296-2268|AAN11834.1|  541|Drosophila melanogaster CG32120-P...    28   8.2  

>AF231134-1|AAF36977.1|  472|Drosophila melanogaster
           cyclin-dependent kinase 5 regulatorysubunit protein.
          Length = 472

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -1

Query: 229 NKHLKIFPQDPQSQLHQQHIFYGENPNDNKSQV 131
           N+H    P   Q QL  QH    +N N N++QV
Sbjct: 206 NQHPHPHPHQHQLQLQNQHQHQNQNQNQNQNQV 238


>AE014134-1830|AAF52906.1|  472|Drosophila melanogaster CG5387-PA
           protein.
          Length = 472

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -1

Query: 229 NKHLKIFPQDPQSQLHQQHIFYGENPNDNKSQV 131
           N+H    P   Q QL  QH    +N N N++QV
Sbjct: 206 NQHPHPHPHQHQLQLQNQHQHQNQNQNQNQNQV 238


>X51549-1|CAA35924.1| 1394|Drosophila melanogaster protein (
           Drosophila mRNA forecdysone-inducible gene E75B. ).
          Length = 1394

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
 Frame = -1

Query: 229 NKHLKIFPQD--PQSQLHQQHIFYGENPNDNKSQVLQTNH 116
           N H+   PQ   P  QLH QH    ++    KSQ L+  H
Sbjct: 51  NLHIVATPQQHQPMHQLHHQHQHQHQHQQQAKSQQLKQQH 90


>BT021311-1|AAX33459.1|  523|Drosophila melanogaster RE14763p
           protein.
          Length = 523

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
 Frame = -1

Query: 229 NKHLKIFPQD--PQSQLHQQHIFYGENPNDNKSQVLQTNH 116
           N H+   PQ   P  QLH QH    ++    KSQ L+  H
Sbjct: 51  NLHIVATPQQHQPMHQLHHQHQHQHQHQQQAKSQQLKQQH 90


>AJ133103-1|CAB63452.1|  897|Drosophila melanogaster RFX
           transcription factor protein.
          Length = 897

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
 Frame = +1

Query: 277 AEWKSMTA-AVVVKMNNKLKLCKTRKILTKKISTYLNMDTSSKRQEKNGRPIQGRA 441
           A W S  A AVV ++ +  K    ++   ++ +++L +   S  +E NG+P   RA
Sbjct: 733 AAWVSQCAPAVVQRLESDFKAALQQQSSLEQWASWLQLVVESAMEEYNGKPTYARA 788


>AE014297-1144|AAF54526.2|  897|Drosophila melanogaster CG6312-PA
           protein.
          Length = 897

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
 Frame = +1

Query: 277 AEWKSMTA-AVVVKMNNKLKLCKTRKILTKKISTYLNMDTSSKRQEKNGRPIQGRA 441
           A W S  A AVV ++ +  K    ++   ++ +++L +   S  +E NG+P   RA
Sbjct: 733 AAWVSQCAPAVVQRLESDFKAALQQQSSLEQWASWLQLVVESAMEEYNGKPTYARA 788


>AE014296-2991|AAN11688.1| 1355|Drosophila melanogaster CG8127-PA,
           isoform A protein.
          Length = 1355

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
 Frame = -1

Query: 229 NKHLKIFPQD--PQSQLHQQHIFYGENPNDNKSQVLQTNH 116
           N H+   PQ   P  QLH QH    ++    KSQ L+  H
Sbjct: 51  NLHIVATPQQHQPMHQLHHQHQHQHQHQQQAKSQQLKQQH 90


>BT023706-1|AAY85106.1|  541|Drosophila melanogaster IP01347p
           protein.
          Length = 541

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = -1

Query: 226 KHLKIFPQDPQSQLHQQHIFYGENPNDNKSQVLQTN 119
           +HLK+  + PQ Q  QQH    E   DN+S     N
Sbjct: 308 QHLKLKSEQPQQQ-QQQHRIKDEQQQDNRSAAALMN 342


>BT022164-1|AAY51558.1|  541|Drosophila melanogaster IP01345p
           protein.
          Length = 541

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = -1

Query: 226 KHLKIFPQDPQSQLHQQHIFYGENPNDNKSQVLQTN 119
           +HLK+  + PQ Q  QQH    E   DN+S     N
Sbjct: 308 QHLKLKSEQPQQQ-QQQHRIKDEQQQDNRSAAALMN 342


>AF212313-1|AAF32281.1|  541|Drosophila melanogaster senseless
           protein protein.
          Length = 541

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = -1

Query: 226 KHLKIFPQDPQSQLHQQHIFYGENPNDNKSQVLQTN 119
           +HLK+  + PQ Q  QQH    E   DN+S     N
Sbjct: 308 QHLKLKSEQPQQQ-QQQHRIKDEQQQDNRSAAALMN 342


>AF212312-1|AAF32280.1|  541|Drosophila melanogaster senseless
           protein protein.
          Length = 541

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = -1

Query: 226 KHLKIFPQDPQSQLHQQHIFYGENPNDNKSQVLQTN 119
           +HLK+  + PQ Q  QQH    E   DN+S     N
Sbjct: 308 QHLKLKSEQPQQQ-QQQHRIKDEQQQDNRSAAALMN 342


>AE014296-2268|AAN11834.1|  541|Drosophila melanogaster CG32120-PA
           protein.
          Length = 541

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = -1

Query: 226 KHLKIFPQDPQSQLHQQHIFYGENPNDNKSQVLQTN 119
           +HLK+  + PQ Q  QQH    E   DN+S     N
Sbjct: 308 QHLKLKSEQPQQQ-QQQHRIKDEQQQDNRSAAALMN 342


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,535,086
Number of Sequences: 53049
Number of extensions: 316295
Number of successful extensions: 1109
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1071
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1109
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1784022528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)