Samia BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_F15
         (546 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_1034 - 8962703-8962748,8962831-8962991,8963068-8963905,896...    28   5.6  

>07_01_1034 - 8962703-8962748,8962831-8962991,8963068-8963905,
            8963991-8964128,8964206-8964355,8964436-8964683,
            8964825-8964953,8965735-8965960,8966909-8966975,
            8967488-8967551,8968902-8969000,8969074-8969157,
            8969240-8969321,8969412-8969460,8969664-8969769,
            8970650-8970734,8970814-8970917,8970994-8971109,
            8971187-8971373,8972005-8972113,8972633-8972761,
            8973365-8973449,8973812-8973947,8974078-8974230,
            8974488-8974634,8974801-8974941,8975580-8975903
          Length = 1400

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 22/65 (33%), Positives = 28/65 (43%)
 Frame = -1

Query: 207  SKFILKLAVPPRLRPRFIYSLLHFFKYRSPIFLNTKIKKKYFS*IQAIARKTVH*IGFYS 28
            S F LK    P   P    SLL F    SP F +     + F+  Q   ++ V  IGF S
Sbjct: 1156 SLFELKGVGCPAFFPWMRKSLLRFMPAPSPSFCDEFRHFQCFAMAQFALKRPVVRIGFLS 1215

Query: 27   NFYEI 13
            N Y +
Sbjct: 1216 NLYRL 1220


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,018,202
Number of Sequences: 37544
Number of extensions: 217082
Number of successful extensions: 344
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 337
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 344
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1222086348
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)