Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_F10
         (476 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       25   0.32 
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    23   2.2  
AB252421-1|BAE80739.1|  122|Apis mellifera GB15078 protein.            23   2.2  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   6.8  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   6.8  

>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 25.4 bits (53), Expect = 0.32
 Identities = 17/81 (20%), Positives = 33/81 (40%), Gaps = 1/81 (1%)
 Frame = +2

Query: 206 WLLPRSDRLLRSW-WVWSRADSAAAGRMFHEFTLRFHPFIRWITQIISVNNL*RILRNVI 382
           W + +  +++ S+ W+ S   S     +FH   L  HP + W +Q ++ N        + 
Sbjct: 147 WDVDKRGKIMLSFAWIGSVVCSLPQTIVFH---LETHPNVTWYSQCVTFNAFPTYTHEIT 203

Query: 383 IPKIPMVRRYSVTVYGITLSY 445
                M+  Y   +  I  +Y
Sbjct: 204 YSLFGMIMMYWFPLVVIIYTY 224


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 12/39 (30%), Positives = 17/39 (43%)
 Frame = -2

Query: 433 NTVYRHAISSHHRYFRYNYISEDSL*IIDRYDLSNPPYE 317
           N +Y  A+S       Y+ +    L  +D    SNP YE
Sbjct: 254 NGIYGIALSPVTNNLYYSPLLSHGLYYVDTEQFSNPQYE 292


>AB252421-1|BAE80739.1|  122|Apis mellifera GB15078 protein.
          Length = 122

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +1

Query: 364 NPQKCNYTENTYGAKI 411
           NP   NY EN  GA+I
Sbjct: 9   NPASANYYENKDGARI 24


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
          protein.
          Length = 1770

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = -2

Query: 73 FTFLMHSASLTIGNSASRTHSGLV 2
          +T+L+ S +LT     S  H+G++
Sbjct: 28 YTYLVRSRTLTSLGDLSDVHTGIL 51


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -2

Query: 391 FRYNYISEDSL*IIDRYDLSNPPYER 314
           F+Y Y+S  +   + + DL N  Y R
Sbjct: 662 FKYGYVSHANQRNMYKLDLKNMKYTR 687


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,534
Number of Sequences: 438
Number of extensions: 2608
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12928545
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)