Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_F09
         (277 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF283269-1|AAG15374.1|  114|Anopheles gambiae ribosomal protein ...    98   5e-23
CR954256-10|CAJ14151.1|  548|Anopheles gambiae putative alkaline...    23   2.1  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    23   2.8  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    22   4.9  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           21   8.5  

>AF283269-1|AAG15374.1|  114|Anopheles gambiae ribosomal protein S26
           protein.
          Length = 114

 Score = 98.3 bits (234), Expect = 5e-23
 Identities = 49/64 (76%), Positives = 53/64 (82%), Gaps = 1/64 (1%)
 Frame = +3

Query: 87  TALAAC-PKTKPSTKFVIRNIVEAAAVRDINEASVYTSFQRPKLYAKLHYCVSCAIHSKV 263
           T  A C PK K   KFVIRNIVEAAAVRDI++ASVY+S+  PKLYAKLHYCVSCAIHSKV
Sbjct: 23  TNCARCVPKDKAIKKFVIRNIVEAAAVRDISDASVYSSYVLPKLYAKLHYCVSCAIHSKV 82

Query: 264 GRNR 275
            RNR
Sbjct: 83  VRNR 86



 Score = 49.6 bits (113), Expect = 2e-08
 Identities = 20/22 (90%), Positives = 20/22 (90%)
 Frame = +2

Query: 62  HVKCVRCTNCARCVPKDKAINK 127
           HVK VRCTNCARCVPKDKAI K
Sbjct: 16  HVKAVRCTNCARCVPKDKAIKK 37


>CR954256-10|CAJ14151.1|  548|Anopheles gambiae putative alkaline
           phosphatase protein.
          Length = 548

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 214 CMQNSTTACHARSIAKW 264
           C   + T+ H  SIAKW
Sbjct: 182 CQAQNDTSNHVHSIAKW 198


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 89  CARCVPKDKAINKVCDQE 142
           C R +P+D  IN  C +E
Sbjct: 426 CTRVIPEDCEINNGCMEE 443


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +3

Query: 84  PTALAACPKTKPSTKFVIRNIVEAA 158
           PT LAA P  +PS   V+ + V  A
Sbjct: 77  PTVLAASPAPQPSLAPVVPSSVVTA 101


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -1

Query: 163  TAAASTIFLITNFVDGFVFGHAASAVGAPDA 71
            T + S   ++T+F D  +F        APDA
Sbjct: 1321 TPSRSVARIVTSFTDSPLFSRRNRQPKAPDA 1351


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.317    0.121    0.368 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 247,605
Number of Sequences: 2352
Number of extensions: 4076
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 54
effective length of database: 436,971
effective search space used: 16167927
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)