Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_F09
(277 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X14247-1|CAA32463.1| 114|Drosophila melanogaster ribosomal prot... 96 7e-21
X13625-1|CAB38441.1| 114|Drosophila melanogaster protein ( Dros... 96 7e-21
AY069761-1|AAL39906.1| 114|Drosophila melanogaster RE01079p pro... 96 7e-21
AE014134-2931|AAN11005.1| 114|Drosophila melanogaster CG10305-P... 96 7e-21
AE014134-2930|AAF53666.1| 114|Drosophila melanogaster CG10305-P... 96 7e-21
AE014134-2929|AAN11004.1| 114|Drosophila melanogaster CG10305-P... 96 7e-21
U89385-1|AAB49892.1| 534|Drosophila melanogaster LIM homeobox p... 27 4.7
AF145674-1|AAD38649.1| 465|Drosophila melanogaster tailup protein. 27 4.7
AE014134-2994|AAN11018.1| 465|Drosophila melanogaster CG10619-P... 27 4.7
AE014134-2993|AAF53720.1| 534|Drosophila melanogaster CG10619-P... 27 4.7
X67077-1|CAA47462.1| 1253|Drosophila melanogaster myosin heavy c... 26 8.2
BT004859-1|AAO45215.1| 1140|Drosophila melanogaster RE25996p pro... 26 8.2
AE014297-3513|AAN13992.1| 1253|Drosophila melanogaster CG5695-PB... 26 8.2
AE014297-3512|AAX52975.1| 1271|Drosophila melanogaster CG5695-PC... 26 8.2
AE014297-3511|AAX52974.1| 1256|Drosophila melanogaster CG5695-PF... 26 8.2
AE014297-3510|AAX52973.1| 1256|Drosophila melanogaster CG5695-PE... 26 8.2
AE014297-3509|AAF56269.2| 1256|Drosophila melanogaster CG5695-PA... 26 8.2
AE014296-517|AAF47693.2| 753|Drosophila melanogaster CG9973-PA ... 26 8.2
>X14247-1|CAA32463.1| 114|Drosophila melanogaster ribosomal protein
S31 protein.
Length = 114
Score = 95.9 bits (228), Expect = 7e-21
Identities = 48/64 (75%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
Frame = +3
Query: 87 TALAAC-PKTKPSTKFVIRNIVEAAAVRDINEASVYTSFQRPKLYAKLHYCVSCAIHSKV 263
T A C PK K KFVIRNIVEAAAVRDI EAS++ S+ PKLYAKLHYCVSCAIHSKV
Sbjct: 24 TNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASIWDSYVLPKLYAKLHYCVSCAIHSKV 83
Query: 264 GRNR 275
RNR
Sbjct: 84 VRNR 87
Score = 48.4 bits (110), Expect = 1e-06
Identities = 20/22 (90%), Positives = 20/22 (90%)
Frame = +2
Query: 62 HVKCVRCTNCARCVPKDKAINK 127
HVK VRCTNCARCVPKDKAI K
Sbjct: 17 HVKPVRCTNCARCVPKDKAIKK 38
>X13625-1|CAB38441.1| 114|Drosophila melanogaster protein (
Drosophila melanogastermRNA for putative ribosomal
protein S31. ).
Length = 114
Score = 95.9 bits (228), Expect = 7e-21
Identities = 48/64 (75%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
Frame = +3
Query: 87 TALAAC-PKTKPSTKFVIRNIVEAAAVRDINEASVYTSFQRPKLYAKLHYCVSCAIHSKV 263
T A C PK K KFVIRNIVEAAAVRDI EAS++ S+ PKLYAKLHYCVSCAIHSKV
Sbjct: 24 TNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASIWDSYVLPKLYAKLHYCVSCAIHSKV 83
Query: 264 GRNR 275
RNR
Sbjct: 84 VRNR 87
Score = 48.4 bits (110), Expect = 1e-06
Identities = 20/22 (90%), Positives = 20/22 (90%)
Frame = +2
Query: 62 HVKCVRCTNCARCVPKDKAINK 127
HVK VRCTNCARCVPKDKAI K
Sbjct: 17 HVKPVRCTNCARCVPKDKAIKK 38
>AY069761-1|AAL39906.1| 114|Drosophila melanogaster RE01079p
protein.
Length = 114
Score = 95.9 bits (228), Expect = 7e-21
Identities = 48/64 (75%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
Frame = +3
Query: 87 TALAAC-PKTKPSTKFVIRNIVEAAAVRDINEASVYTSFQRPKLYAKLHYCVSCAIHSKV 263
T A C PK K KFVIRNIVEAAAVRDI EAS++ S+ PKLYAKLHYCVSCAIHSKV
Sbjct: 24 TNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASIWDSYVLPKLYAKLHYCVSCAIHSKV 83
Query: 264 GRNR 275
RNR
Sbjct: 84 VRNR 87
Score = 48.4 bits (110), Expect = 1e-06
Identities = 20/22 (90%), Positives = 20/22 (90%)
Frame = +2
Query: 62 HVKCVRCTNCARCVPKDKAINK 127
HVK VRCTNCARCVPKDKAI K
Sbjct: 17 HVKPVRCTNCARCVPKDKAIKK 38
>AE014134-2931|AAN11005.1| 114|Drosophila melanogaster CG10305-PC,
isoform C protein.
Length = 114
Score = 95.9 bits (228), Expect = 7e-21
Identities = 48/64 (75%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
Frame = +3
Query: 87 TALAAC-PKTKPSTKFVIRNIVEAAAVRDINEASVYTSFQRPKLYAKLHYCVSCAIHSKV 263
T A C PK K KFVIRNIVEAAAVRDI EAS++ S+ PKLYAKLHYCVSCAIHSKV
Sbjct: 24 TNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASIWDSYVLPKLYAKLHYCVSCAIHSKV 83
Query: 264 GRNR 275
RNR
Sbjct: 84 VRNR 87
Score = 48.4 bits (110), Expect = 1e-06
Identities = 20/22 (90%), Positives = 20/22 (90%)
Frame = +2
Query: 62 HVKCVRCTNCARCVPKDKAINK 127
HVK VRCTNCARCVPKDKAI K
Sbjct: 17 HVKPVRCTNCARCVPKDKAIKK 38
>AE014134-2930|AAF53666.1| 114|Drosophila melanogaster CG10305-PB,
isoform B protein.
Length = 114
Score = 95.9 bits (228), Expect = 7e-21
Identities = 48/64 (75%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
Frame = +3
Query: 87 TALAAC-PKTKPSTKFVIRNIVEAAAVRDINEASVYTSFQRPKLYAKLHYCVSCAIHSKV 263
T A C PK K KFVIRNIVEAAAVRDI EAS++ S+ PKLYAKLHYCVSCAIHSKV
Sbjct: 24 TNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASIWDSYVLPKLYAKLHYCVSCAIHSKV 83
Query: 264 GRNR 275
RNR
Sbjct: 84 VRNR 87
Score = 48.4 bits (110), Expect = 1e-06
Identities = 20/22 (90%), Positives = 20/22 (90%)
Frame = +2
Query: 62 HVKCVRCTNCARCVPKDKAINK 127
HVK VRCTNCARCVPKDKAI K
Sbjct: 17 HVKPVRCTNCARCVPKDKAIKK 38
>AE014134-2929|AAN11004.1| 114|Drosophila melanogaster CG10305-PA,
isoform A protein.
Length = 114
Score = 95.9 bits (228), Expect = 7e-21
Identities = 48/64 (75%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
Frame = +3
Query: 87 TALAAC-PKTKPSTKFVIRNIVEAAAVRDINEASVYTSFQRPKLYAKLHYCVSCAIHSKV 263
T A C PK K KFVIRNIVEAAAVRDI EAS++ S+ PKLYAKLHYCVSCAIHSKV
Sbjct: 24 TNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASIWDSYVLPKLYAKLHYCVSCAIHSKV 83
Query: 264 GRNR 275
RNR
Sbjct: 84 VRNR 87
Score = 48.4 bits (110), Expect = 1e-06
Identities = 20/22 (90%), Positives = 20/22 (90%)
Frame = +2
Query: 62 HVKCVRCTNCARCVPKDKAINK 127
HVK VRCTNCARCVPKDKAI K
Sbjct: 17 HVKPVRCTNCARCVPKDKAIKK 38
>U89385-1|AAB49892.1| 534|Drosophila melanogaster LIM homeobox
protein protein.
Length = 534
Score = 26.6 bits (56), Expect = 4.7
Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = +2
Query: 62 HVKCVRCTNCAR-CVPKDKAINKVCDQEYC 148
H++C RC+ CAR +P D+ + YC
Sbjct: 138 HIECFRCSACARQLLPGDEFALRDAGALYC 167
>AF145674-1|AAD38649.1| 465|Drosophila melanogaster tailup protein.
Length = 465
Score = 26.6 bits (56), Expect = 4.7
Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = +2
Query: 62 HVKCVRCTNCAR-CVPKDKAINKVCDQEYC 148
H++C RC+ CAR +P D+ + YC
Sbjct: 138 HIECFRCSACARQLLPGDEFALRDAGALYC 167
>AE014134-2994|AAN11018.1| 465|Drosophila melanogaster CG10619-PB,
isoform B protein.
Length = 465
Score = 26.6 bits (56), Expect = 4.7
Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = +2
Query: 62 HVKCVRCTNCAR-CVPKDKAINKVCDQEYC 148
H++C RC+ CAR +P D+ + YC
Sbjct: 138 HIECFRCSACARQLLPGDEFALRDAGALYC 167
>AE014134-2993|AAF53720.1| 534|Drosophila melanogaster CG10619-PA,
isoform A protein.
Length = 534
Score = 26.6 bits (56), Expect = 4.7
Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = +2
Query: 62 HVKCVRCTNCAR-CVPKDKAINKVCDQEYC 148
H++C RC+ CAR +P D+ + YC
Sbjct: 138 HIECFRCSACARQLLPGDEFALRDAGALYC 167
>X67077-1|CAA47462.1| 1253|Drosophila melanogaster myosin heavy chain
protein.
Length = 1253
Score = 25.8 bits (54), Expect = 8.2
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 116 AINKVCDQEYC*SCRCEGHKRSLSIY 193
AIN CD E +CR E H+R L +Y
Sbjct: 1076 AINTSCDIELLEACRQEFHRR-LKVY 1100
>BT004859-1|AAO45215.1| 1140|Drosophila melanogaster RE25996p protein.
Length = 1140
Score = 25.8 bits (54), Expect = 8.2
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 116 AINKVCDQEYC*SCRCEGHKRSLSIY 193
AIN CD E +CR E H+R L +Y
Sbjct: 1076 AINTSCDIELLEACRQEFHRR-LKVY 1100
>AE014297-3513|AAN13992.1| 1253|Drosophila melanogaster CG5695-PB,
isoform B protein.
Length = 1253
Score = 25.8 bits (54), Expect = 8.2
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 116 AINKVCDQEYC*SCRCEGHKRSLSIY 193
AIN CD E +CR E H+R L +Y
Sbjct: 1076 AINTSCDIELLEACRQEFHRR-LKVY 1100
>AE014297-3512|AAX52975.1| 1271|Drosophila melanogaster CG5695-PC,
isoform C protein.
Length = 1271
Score = 25.8 bits (54), Expect = 8.2
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 116 AINKVCDQEYC*SCRCEGHKRSLSIY 193
AIN CD E +CR E H+R L +Y
Sbjct: 1094 AINTSCDIELLEACRQEFHRR-LKVY 1118
>AE014297-3511|AAX52974.1| 1256|Drosophila melanogaster CG5695-PF,
isoform F protein.
Length = 1256
Score = 25.8 bits (54), Expect = 8.2
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 116 AINKVCDQEYC*SCRCEGHKRSLSIY 193
AIN CD E +CR E H+R L +Y
Sbjct: 1079 AINTSCDIELLEACRQEFHRR-LKVY 1103
>AE014297-3510|AAX52973.1| 1256|Drosophila melanogaster CG5695-PE,
isoform E protein.
Length = 1256
Score = 25.8 bits (54), Expect = 8.2
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 116 AINKVCDQEYC*SCRCEGHKRSLSIY 193
AIN CD E +CR E H+R L +Y
Sbjct: 1079 AINTSCDIELLEACRQEFHRR-LKVY 1103
>AE014297-3509|AAF56269.2| 1256|Drosophila melanogaster CG5695-PA,
isoform A protein.
Length = 1256
Score = 25.8 bits (54), Expect = 8.2
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 116 AINKVCDQEYC*SCRCEGHKRSLSIY 193
AIN CD E +CR E H+R L +Y
Sbjct: 1079 AINTSCDIELLEACRQEFHRR-LKVY 1103
>AE014296-517|AAF47693.2| 753|Drosophila melanogaster CG9973-PA
protein.
Length = 753
Score = 25.8 bits (54), Expect = 8.2
Identities = 10/29 (34%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = +2
Query: 65 VKCVRCTNCARCVP-KDKAINKVCDQEYC 148
V C R NC C P ++ +++C Q C
Sbjct: 658 VGCQRKDNCGECAPCRNDKSHQICKQRRC 686
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.317 0.121 0.368
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,283,712
Number of Sequences: 53049
Number of extensions: 168252
Number of successful extensions: 618
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 591
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 616
length of database: 24,988,368
effective HSP length: 70
effective length of database: 21,274,938
effective search space used: 446773698
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
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