Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_F09
         (277 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   1.2  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   2.8  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   2.8  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    20   4.9  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    20   6.5  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    20   6.5  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    19   8.6  

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.2 bits (45), Expect = 1.2
 Identities = 11/39 (28%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
 Frame = +3

Query: 69  SASGAPTALAACPKTKP---STKFVIRNIVEAAAVRDIN 176
           SAS APT++ + P+++        V++ +++A  + D N
Sbjct: 596 SASSAPTSVCSSPRSEDKEVEDMPVLKRVLQAPPLYDTN 634


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.0 bits (42), Expect = 2.8
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -2

Query: 234 SSGVLHTAWDVGMKYILRLRLCP 166
           +SGV+H A D     +   + CP
Sbjct: 243 NSGVVHVAQDESTSLVCVAQACP 265


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.0 bits (42), Expect = 2.8
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -2

Query: 234 SSGVLHTAWDVGMKYILRLRLCP 166
           +SGV+H A D     +   + CP
Sbjct: 243 NSGVVHVAQDESTSLVCVAQACP 265


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 20.2 bits (40), Expect = 4.9
 Identities = 5/8 (62%), Positives = 7/8 (87%)
 Frame = +3

Query: 231 YCVSCAIH 254
           YCV+C +H
Sbjct: 542 YCVACGLH 549


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 19.8 bits (39), Expect = 6.5
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 120 STKFVIRNIVEAAAVR 167
           ST+F +  +VE AA R
Sbjct: 454 STEFFLATVVEEAACR 469


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 19.8 bits (39), Expect = 6.5
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +2

Query: 104 PKDKAINKVCDQEY 145
           PK  A+ K  DQ+Y
Sbjct: 423 PKSTAVQKYQDQDY 436


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 19.4 bits (38), Expect = 8.6
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +3

Query: 228 HYCVSCAIHSK 260
           H C +C  HSK
Sbjct: 277 HSCEACPAHSK 287


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.317    0.121    0.368 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,653
Number of Sequences: 438
Number of extensions: 986
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  5388717
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.4 bits)