Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_F08
(520 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC084158-5|AAO21417.1| 200|Caenorhabditis elegans Hypothetical ... 149 2e-36
AC084158-4|AAK68562.1| 299|Caenorhabditis elegans Hypothetical ... 149 2e-36
AC084158-3|AAL00872.1| 313|Caenorhabditis elegans Hypothetical ... 149 2e-36
U58745-2|AAU05593.1| 569|Caenorhabditis elegans Hypothetical pr... 29 1.5
U58745-1|AAB00620.2| 574|Caenorhabditis elegans Hypothetical pr... 29 1.5
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 29 2.6
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 29 2.6
AC006777-3|AAK72309.1| 345|Caenorhabditis elegans Hypothetical ... 28 4.6
Z92797-1|CAB07234.1| 552|Caenorhabditis elegans Hypothetical pr... 27 6.1
Z34802-8|CAH10787.1| 704|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z34802-7|CAA84338.2| 828|Caenorhabditis elegans Hypothetical pr... 27 8.0
U50312-11|AAK71353.2| 1217|Caenorhabditis elegans Hypothetical p... 27 8.0
>AC084158-5|AAO21417.1| 200|Caenorhabditis elegans Hypothetical
protein Y69A2AR.18c protein.
Length = 200
Score = 149 bits (360), Expect = 2e-36
Identities = 76/135 (56%), Positives = 97/135 (71%), Gaps = 4/135 (2%)
Frame = +3
Query: 123 NHQQNRNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFY 302
N +Q R ATLK ISIRLKSVKNIQKIT+SMKMV+AAKY +AER+LK AR YG GA F+
Sbjct: 18 NAEQARGFATLKDISIRLKSVKNIQKITKSMKMVAAAKYAKAERELKGARAYGVGAKTFF 77
Query: 303 ER----AEVVALEDDPKQLYVAMTSDRGLCGAVHTGVSKVIRNRLNEPGAENIKVICVGD 470
+ E V ++ KQ+ V +TSDRGLCG VH+ + K +N LN G + I+V+ +GD
Sbjct: 78 DNIDPVVEGVEKQESKKQVLVLITSDRGLCGGVHSSIVKEAKNILNNAGDKEIRVVAIGD 137
Query: 471 KSRSILQRLYSKHII 515
KSR+ LQRLY+ I+
Sbjct: 138 KSRAGLQRLYANSIL 152
>AC084158-4|AAK68562.1| 299|Caenorhabditis elegans Hypothetical
protein Y69A2AR.18a protein.
Length = 299
Score = 149 bits (360), Expect = 2e-36
Identities = 76/135 (56%), Positives = 97/135 (71%), Gaps = 4/135 (2%)
Frame = +3
Query: 123 NHQQNRNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFY 302
N +Q R ATLK ISIRLKSVKNIQKIT+SMKMV+AAKY +AER+LK AR YG GA F+
Sbjct: 18 NAEQARGFATLKDISIRLKSVKNIQKITKSMKMVAAAKYAKAERELKGARAYGVGAKTFF 77
Query: 303 ER----AEVVALEDDPKQLYVAMTSDRGLCGAVHTGVSKVIRNRLNEPGAENIKVICVGD 470
+ E V ++ KQ+ V +TSDRGLCG VH+ + K +N LN G + I+V+ +GD
Sbjct: 78 DNIDPVVEGVEKQESKKQVLVLITSDRGLCGGVHSSIVKEAKNILNNAGDKEIRVVAIGD 137
Query: 471 KSRSILQRLYSKHII 515
KSR+ LQRLY+ I+
Sbjct: 138 KSRAGLQRLYANSIL 152
>AC084158-3|AAL00872.1| 313|Caenorhabditis elegans Hypothetical
protein Y69A2AR.18b protein.
Length = 313
Score = 149 bits (360), Expect = 2e-36
Identities = 76/135 (56%), Positives = 97/135 (71%), Gaps = 4/135 (2%)
Frame = +3
Query: 123 NHQQNRNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFY 302
N +Q R ATLK ISIRLKSVKNIQKIT+SMKMV+AAKY +AER+LK AR YG GA F+
Sbjct: 18 NAEQARGFATLKDISIRLKSVKNIQKITKSMKMVAAAKYAKAERELKGARAYGVGAKTFF 77
Query: 303 ER----AEVVALEDDPKQLYVAMTSDRGLCGAVHTGVSKVIRNRLNEPGAENIKVICVGD 470
+ E V ++ KQ+ V +TSDRGLCG VH+ + K +N LN G + I+V+ +GD
Sbjct: 78 DNIDPVVEGVEKQESKKQVLVLITSDRGLCGGVHSSIVKEAKNILNNAGDKEIRVVAIGD 137
Query: 471 KSRSILQRLYSKHII 515
KSR+ LQRLY+ I+
Sbjct: 138 KSRAGLQRLYANSIL 152
>U58745-2|AAU05593.1| 569|Caenorhabditis elegans Hypothetical
protein C10G6.1b protein.
Length = 569
Score = 29.5 bits (63), Expect = 1.5
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +3
Query: 333 DPKQLYVAMTSDRGLCGAVHTGVSKVIRNRLNEPGAEN 446
+PK+L + +RGL VS +++NRLNE G+EN
Sbjct: 230 NPKELLQFLKLNRGLFFIRSNKVS-LVKNRLNEDGSEN 266
>U58745-1|AAB00620.2| 574|Caenorhabditis elegans Hypothetical
protein C10G6.1a protein.
Length = 574
Score = 29.5 bits (63), Expect = 1.5
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +3
Query: 333 DPKQLYVAMTSDRGLCGAVHTGVSKVIRNRLNEPGAEN 446
+PK+L + +RGL VS +++NRLNE G+EN
Sbjct: 230 NPKELLQFLKLNRGLFFIRSNKVS-LVKNRLNEDGSEN 266
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 28.7 bits (61), Expect = 2.6
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -3
Query: 425 EPVADHLRDTGVDSTTQSSVRGHSDVEL 342
EP+A HL+ +G+D T SS D +L
Sbjct: 273 EPIATHLKSSGLDVTFVSSAMSQKDRQL 300
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 28.7 bits (61), Expect = 2.6
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -3
Query: 425 EPVADHLRDTGVDSTTQSSVRGHSDVEL 342
EP+A HL+ +G+D T SS D +L
Sbjct: 273 EPIATHLKSSGLDVTFVSSAMSQKDRQL 300
>AC006777-3|AAK72309.1| 345|Caenorhabditis elegans Hypothetical
protein Y46H3D.6 protein.
Length = 345
Score = 27.9 bits (59), Expect = 4.6
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = -3
Query: 149 GHIPVLLVVDHRHRLGAYTRCDTTQHFHGFFQAFLIKIHQPTKYVAG 9
GHIP ++ H++ ++ +QHF FQ+ L I + K G
Sbjct: 120 GHIPKMIKYQEMHKMCSFDLQLVSQHFTSIFQS-LTPISEAQKVTLG 165
>Z92797-1|CAB07234.1| 552|Caenorhabditis elegans Hypothetical
protein H25P06.1 protein.
Length = 552
Score = 27.5 bits (58), Expect = 6.1
Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Frame = +3
Query: 366 DRGLCGAVHTGVSKVIRNRLNEPGAENI-KVI---CVGDKSRSILQRLYSKHII 515
D G + T K++ ++ + PG ++ K+I C+G+ R +L+RL ++
Sbjct: 295 DNGEADYIFTRYDKIVDSKSDHPGVNSLDKLIAGMCMGELVRLVLERLCENKVL 348
>Z34802-8|CAH10787.1| 704|Caenorhabditis elegans Hypothetical
protein M88.5b protein.
Length = 704
Score = 27.1 bits (57), Expect = 8.0
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +2
Query: 449 QGYLRRRQVPQHLATSLQQTHHQ 517
QGY +Q QH A QQ+HHQ
Sbjct: 131 QGYHPHQQNQQHQAGQHQQSHHQ 153
>Z34802-7|CAA84338.2| 828|Caenorhabditis elegans Hypothetical
protein M88.5a protein.
Length = 828
Score = 27.1 bits (57), Expect = 8.0
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +2
Query: 449 QGYLRRRQVPQHLATSLQQTHHQ 517
QGY +Q QH A QQ+HHQ
Sbjct: 255 QGYHPHQQNQQHQAGQHQQSHHQ 277
>U50312-11|AAK71353.2| 1217|Caenorhabditis elegans Hypothetical
protein B0222.9 protein.
Length = 1217
Score = 27.1 bits (57), Expect = 8.0
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +3
Query: 378 CGAVHTGVSKVIRNRLNEPGAENIKVICVGDKSRSILQRLYSK 506
CGAVH+ + I N NE G V + S +Q L SK
Sbjct: 1175 CGAVHSSIMNCIDNWRNENGIHEF-VDTISPLSAEKIQELCSK 1216
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,264,923
Number of Sequences: 27780
Number of extensions: 264251
Number of successful extensions: 892
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 841
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 887
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1007108110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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