Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_F04
         (445 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069715-1|AAL39860.1|  786|Drosophila melanogaster LP01394p pro...    28   6.6  
AL109630-3|CAB65872.1|  975|Drosophila melanogaster EG:BACR7A4.1...    28   6.6  
AE014298-123|ABC67162.1|  786|Drosophila melanogaster CG3711-PB,...    28   6.6  
AE014298-122|AAF45563.1|  975|Drosophila melanogaster CG3711-PA,...    28   6.6  

>AY069715-1|AAL39860.1|  786|Drosophila melanogaster LP01394p
           protein.
          Length = 786

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +1

Query: 277 MCVQWRCEGRPPVTASTSAGLGADNTTLVHAG 372
           M V+W+  GR PV  S       DN   ++AG
Sbjct: 345 MWVEWKFSGRQPVPRSAHGAAVYDNKMWIYAG 376


>AL109630-3|CAB65872.1|  975|Drosophila melanogaster EG:BACR7A4.19
           protein.
          Length = 975

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +1

Query: 277 MCVQWRCEGRPPVTASTSAGLGADNTTLVHAG 372
           M V+W+  GR PV  S       DN   ++AG
Sbjct: 345 MWVEWKFSGRQPVPRSAHGAAVYDNKMWIYAG 376


>AE014298-123|ABC67162.1|  786|Drosophila melanogaster CG3711-PB,
           isoform B protein.
          Length = 786

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +1

Query: 277 MCVQWRCEGRPPVTASTSAGLGADNTTLVHAG 372
           M V+W+  GR PV  S       DN   ++AG
Sbjct: 345 MWVEWKFSGRQPVPRSAHGAAVYDNKMWIYAG 376


>AE014298-122|AAF45563.1|  975|Drosophila melanogaster CG3711-PA,
           isoform A protein.
          Length = 975

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +1

Query: 277 MCVQWRCEGRPPVTASTSAGLGADNTTLVHAG 372
           M V+W+  GR PV  S       DN   ++AG
Sbjct: 345 MWVEWKFSGRQPVPRSAHGAAVYDNKMWIYAG 376


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,364,708
Number of Sequences: 53049
Number of extensions: 412009
Number of successful extensions: 1493
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1439
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1489
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1438687674
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)