Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_F04
         (445 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    22   2.6  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      22   3.5  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    21   4.6  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    21   4.6  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    21   4.6  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    21   4.6  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   8.0  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   8.0  

>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = -2

Query: 435 FFLIGVIFIAKLY 397
           FFLI ++FIA LY
Sbjct: 213 FFLIPMVFIAVLY 225


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 9/19 (47%), Positives = 11/19 (57%), Gaps = 1/19 (5%)
 Frame = -1

Query: 244 RSETIY-THKHAHTHNILY 191
           R   IY +H H H H +LY
Sbjct: 65  RDLPIYQSHHHLHHHQVLY 83


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -2

Query: 429 LIGVIFIAKLYNNGPLVLISRMH 361
           LI V F  ++Y NG +  + R H
Sbjct: 159 LIPVHFALRIYRNGTVNYLMRRH 181


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -2

Query: 429 LIGVIFIAKLYNNGPLVLISRMH 361
           LI V F  ++Y NG +  + R H
Sbjct: 159 LIPVHFALRIYRNGTVNYLMRRH 181


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -2

Query: 429 LIGVIFIAKLYNNGPLVLISRMH 361
           LI V F  ++Y NG +  + R H
Sbjct: 210 LIPVHFALRIYRNGTVNYLMRRH 232


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -2

Query: 429 LIGVIFIAKLYNNGPLVLISRMH 361
           LI V F  ++Y NG +  + R H
Sbjct: 159 LIPVHFALRIYRNGTVNYLMRRH 181


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 9/30 (30%), Positives = 13/30 (43%)
 Frame = -3

Query: 158 RPSKFGTAAPPRAHTTLTLKNVILQRTRWS 69
           RP+  G   PP  H  L  K +  Q   ++
Sbjct: 110 RPASPGYVQPPTKHQKLDQKFIFPQENNYN 139


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +1

Query: 304 RPPVTASTSAGLGADNTTLVHA 369
           RP    ST+ G+ + + TL H+
Sbjct: 584 RPQRACSTTGGVPSKSPTLTHS 605


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,665
Number of Sequences: 438
Number of extensions: 2561
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11574126
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)