Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_F03
         (508 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    24   2.6  
AJ973471-1|CAJ01518.1|  122|Anopheles gambiae hypothetical prote...    23   7.9  
AJ697731-1|CAG26924.1|  122|Anopheles gambiae putative chemosens...    23   7.9  
AJ697730-1|CAG26923.1|  122|Anopheles gambiae putative chemosens...    23   7.9  

>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 10/75 (13%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
 Frame = +2

Query: 287  KRIAEVSTQLQECSKQQTTCMEESLTLLEQRDSHVRKINDMDKQKTKLLD-ELTDYKTKL 463
            +++  +  ++ EC +   +   ++  + +  D +  +IN++   K K+L  ++     ++
Sbjct: 850  EKVRALEAKVAECKQAFDSSSTKADAMQKNVDRYTEQINEITNSKVKVLQTKINGLGKQI 909

Query: 464  SKSDVQVNNTRVDVE 508
             K    ++   V+++
Sbjct: 910  DKLSANISKLTVEIK 924


>AJ973471-1|CAJ01518.1|  122|Anopheles gambiae hypothetical protein
           protein.
          Length = 122

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = +2

Query: 278 ELRKRIAEVSTQLQECSKQQTTCMEESLTLLEQR 379
           EL+     + T  ++CS++Q T   + +  LE+R
Sbjct: 60  ELKTLPDALKTNCEKCSEKQRTSSRKVIAHLEER 93


>AJ697731-1|CAG26924.1|  122|Anopheles gambiae putative chemosensory
           protein CSP2 protein.
          Length = 122

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = +2

Query: 278 ELRKRIAEVSTQLQECSKQQTTCMEESLTLLEQR 379
           EL+     + T  ++CS++Q T   + +  LE+R
Sbjct: 60  ELKTLPDALKTNCEKCSEKQRTSSRKVIAHLEER 93


>AJ697730-1|CAG26923.1|  122|Anopheles gambiae putative chemosensory
           protein CSP1 protein.
          Length = 122

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = +2

Query: 278 ELRKRIAEVSTQLQECSKQQTTCMEESLTLLEQR 379
           EL+     + T  ++CS++Q T   + +  LE+R
Sbjct: 60  ELKTLPDALKTNCEKCSEKQRTSSRKVIAHLEER 93


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 450,605
Number of Sequences: 2352
Number of extensions: 7890
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 45668772
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)