Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_F02
         (361 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   2.5  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   2.5  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    21   4.4  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      21   4.4  
DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein ...    21   5.9  
AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein ...    21   5.9  
AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex det...    20   7.7  
AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    20   7.7  

>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.8 bits (44), Expect = 2.5
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = -1

Query: 172 LYRHIYNDMIIVFTTPYSV 116
           L+  +YN ++I+ +T Y+V
Sbjct: 675 LFSQLYNALLILISTVYAV 693


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.8 bits (44), Expect = 2.5
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = -1

Query: 172 LYRHIYNDMIIVFTTPYSV 116
           L+  +YN ++I+ +T Y+V
Sbjct: 765 LFSQLYNALLILISTVYAV 783


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 267 CRVSPTHPSIDFIG 308
           CR SP++PSI   G
Sbjct: 331 CRCSPSNPSITRTG 344


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -1

Query: 277 LTRHRRCREYPLYLPGPPATYS 212
           L+ H R +E  LYL   P  YS
Sbjct: 128 LSDHSRDQEQNLYLTPSPQMYS 149


>DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein 1
           protein.
          Length = 116

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -3

Query: 224 RHLFINPLLCVSLTQPYSI*TYL*RYDY 141
           RH +I  L+   LT  Y+   Y  +YDY
Sbjct: 2   RHNYIVILILSLLTWTYAEELYSDKYDY 29


>AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein
           protein.
          Length = 116

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -3

Query: 224 RHLFINPLLCVSLTQPYSI*TYL*RYDY 141
           RH +I  L+   LT  Y+   Y  +YDY
Sbjct: 2   RHNYIVILILSLLTWTYAEELYSDKYDY 29


>AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 20.2 bits (40), Expect = 7.7
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -3

Query: 266 QKVPRIPTIPPGTSRHLFINP 204
           +++PR   I P TS   FI P
Sbjct: 370 EQIPRFRHIGPSTSFPRFIPP 390


>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 20.2 bits (40), Expect = 7.7
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -3

Query: 203 LLCVSLTQPYSI*TY 159
           +L  SLT+PY++  Y
Sbjct: 197 VLATSLTEPYTLRNY 211


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,745
Number of Sequences: 438
Number of extensions: 2522
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8432340
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)