Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_F01
(480 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U64849-2|AAC48051.1| 411|Caenorhabditis elegans Hypothetical pr... 47 8e-06
Z79696-2|CAB01973.1| 405|Caenorhabditis elegans Hypothetical pr... 46 2e-05
AC024835-2|AAK68537.1| 684|Caenorhabditis elegans Hypothetical ... 43 1e-04
AF067942-3|AAL11486.1| 351|Caenorhabditis elegans Hypothetical ... 43 1e-04
AF067942-2|AAG45574.1| 403|Caenorhabditis elegans Hypothetical ... 43 1e-04
AF022976-9|AAC69088.2| 404|Caenorhabditis elegans Hypothetical ... 42 2e-04
Z81055-8|CAB02896.2| 409|Caenorhabditis elegans Hypothetical pr... 39 0.002
AL117200-4|CAB60584.1| 401|Caenorhabditis elegans Hypothetical ... 39 0.002
Z70780-7|CAA94824.1| 411|Caenorhabditis elegans Hypothetical pr... 38 0.004
Z81579-8|CAN86617.1| 930|Caenorhabditis elegans Hypothetical pr... 31 0.57
U56864-1|AAB04059.1| 355|Caenorhabditis elegans EGL-30 protein. 28 4.0
AY008139-1|AAG32092.1| 355|Caenorhabditis elegans heterotrimeri... 28 4.0
AF003739-2|AAM15593.1| 303|Caenorhabditis elegans Egg laying de... 28 4.0
AF003739-1|AAB58071.1| 355|Caenorhabditis elegans Egg laying de... 28 4.0
Z81579-7|CAB61019.1| 927|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z81118-3|CAB03325.1| 346|Caenorhabditis elegans Hypothetical pr... 27 7.0
AF016852-1|AAB94551.1| 927|Caenorhabditis elegans HMP-1 protein. 27 7.0
Z75554-3|CAA99955.2| 533|Caenorhabditis elegans Hypothetical pr... 27 9.3
U39648-3|AAM15603.1| 434|Caenorhabditis elegans Hypothetical pr... 27 9.3
>U64849-2|AAC48051.1| 411|Caenorhabditis elegans Hypothetical
protein K04A8.5 protein.
Length = 411
Score = 46.8 bits (106), Expect = 8e-06
Identities = 24/57 (42%), Positives = 30/57 (52%)
Frame = -1
Query: 231 FIGYDFLGQNYTNIPNIAQHAPAGSSINQLLHYFQLVNSGEFHKFDYRKQKNIKIYG 61
FIG N T IP H PAGSS N + H Q+ + G FD ++KN+K YG
Sbjct: 271 FIGTANENWNQTRIPVYLAHTPAGSSSNVMAHLDQMFSYGGVPTFDMGEEKNLKAYG 327
>Z79696-2|CAB01973.1| 405|Caenorhabditis elegans Hypothetical
protein F54F3.3 protein.
Length = 405
Score = 45.6 bits (103), Expect = 2e-05
Identities = 19/48 (39%), Positives = 28/48 (58%)
Frame = -1
Query: 204 NYTNIPNIAQHAPAGSSINQLLHYFQLVNSGEFHKFDYRKQKNIKIYG 61
N T +P H PAG+S ++H+ Q+V G K+DY ++ N K YG
Sbjct: 273 NATRVPIYVAHTPAGTSTQNIVHWIQMVRHGGTPKYDYGEKGNKKHYG 320
>AC024835-2|AAK68537.1| 684|Caenorhabditis elegans Hypothetical
protein Y57E12B.3 protein.
Length = 684
Score = 43.2 bits (97), Expect = 1e-04
Identities = 19/48 (39%), Positives = 27/48 (56%)
Frame = -1
Query: 204 NYTNIPNIAQHAPAGSSINQLLHYFQLVNSGEFHKFDYRKQKNIKIYG 61
N + I H PAG+S +LH+ Q+V +FD+ K N+KIYG
Sbjct: 518 NNSRIGIYLAHNPAGTSSRNILHFAQMVKKKRMSRFDHGKDLNLKIYG 565
>AF067942-3|AAL11486.1| 351|Caenorhabditis elegans Hypothetical
protein ZK6.7b protein.
Length = 351
Score = 42.7 bits (96), Expect = 1e-04
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = -1
Query: 204 NYTNIPNIAQHAPAGSSINQLLHYFQLVNSGEFHKFDYRKQKNIKIYG 61
N T +P A H PAG+S ++H+ Q+V+ G +D+ + N K YG
Sbjct: 271 NQTRVPVYATHDPAGTSTQNIVHWMQMVHHGGVPAYDWGTKTNKKKYG 318
>AF067942-2|AAG45574.1| 403|Caenorhabditis elegans Hypothetical
protein ZK6.7a protein.
Length = 403
Score = 42.7 bits (96), Expect = 1e-04
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = -1
Query: 204 NYTNIPNIAQHAPAGSSINQLLHYFQLVNSGEFHKFDYRKQKNIKIYG 61
N T +P A H PAG+S ++H+ Q+V+ G +D+ + N K YG
Sbjct: 271 NQTRVPVYATHDPAGTSTQNIVHWMQMVHHGGVPAYDWGTKTNKKKYG 318
>AF022976-9|AAC69088.2| 404|Caenorhabditis elegans Hypothetical
protein R11G11.14 protein.
Length = 404
Score = 42.3 bits (95), Expect = 2e-04
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = -1
Query: 204 NYTNIPNIAQHAPAGSSINQLLHYFQLVNSGEFHKFDYRKQKNIKIYG 61
N T +P A H PAG++ ++H+ Q+V G +D+ ++N K YG
Sbjct: 272 NSTRVPVYASHDPAGTATQNIVHWIQMVRHGGVPAYDWGSKENKKKYG 319
>Z81055-8|CAB02896.2| 409|Caenorhabditis elegans Hypothetical
protein F01G10.7 protein.
Length = 409
Score = 39.1 bits (87), Expect = 0.002
Identities = 18/38 (47%), Positives = 21/38 (55%)
Frame = -1
Query: 174 HAPAGSSINQLLHYFQLVNSGEFHKFDYRKQKNIKIYG 61
H PA +S+ L H+ QLV S KFDY NI YG
Sbjct: 277 HTPAATSVKDLQHWIQLVKSQTVSKFDYGTDGNIIEYG 314
>AL117200-4|CAB60584.1| 401|Caenorhabditis elegans Hypothetical
protein Y50E8A.7 protein.
Length = 401
Score = 38.7 bits (86), Expect = 0.002
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = -1
Query: 225 GYDFLGQ-NYTNIPNIAQHAPAGSSINQLLHYFQLVNSGEFHKFDYRKQKNIKIYG 61
G + LGQ N + IP I H P+ +S LLH+ Q+ E + D +N+ YG
Sbjct: 261 GIETLGQVNDSRIPIILSHFPSATSTLNLLHWMQIFKYHELRRLDLGTARNLIAYG 316
>Z70780-7|CAA94824.1| 411|Caenorhabditis elegans Hypothetical
protein F46B6.8 protein.
Length = 411
Score = 37.9 bits (84), Expect = 0.004
Identities = 19/51 (37%), Positives = 27/51 (52%)
Frame = -1
Query: 168 PAGSSINQLLHYFQLVNSGEFHKFDYRKQKNIKIYGYXXXXXXXFGTCKRT 16
PAG+S ++H+ Q+V +G FD+ K+ N K YG FG K T
Sbjct: 290 PAGTSTQNIVHWMQMVRNGRVPAFDWGKKINKKKYGQDTPPEYDFGAIKGT 340
>Z81579-8|CAN86617.1| 930|Caenorhabditis elegans Hypothetical
protein R13H4.4b protein.
Length = 930
Score = 30.7 bits (66), Expect = 0.57
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +3
Query: 402 CRRSIENRPLSPSKALSKATR 464
CRR+ E RPL P+K L++ TR
Sbjct: 884 CRRASERRPLQPAKVLAEFTR 904
>U56864-1|AAB04059.1| 355|Caenorhabditis elegans EGL-30 protein.
Length = 355
Score = 27.9 bits (59), Expect = 4.0
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = -1
Query: 468 PHVWLLKELLKDSGVGFQSTFGSLAVIPLSPVARFFLSCLRAIQI 334
P+V +KEL +DSG+ Q + L+ A+++LS LR + +
Sbjct: 123 PYVSYIKELWEDSGI--QECYDRRREYQLTDSAKYYLSDLRRLAV 165
>AY008139-1|AAG32092.1| 355|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 355
Score = 27.9 bits (59), Expect = 4.0
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = -1
Query: 468 PHVWLLKELLKDSGVGFQSTFGSLAVIPLSPVARFFLSCLRAIQI 334
P+V +KEL +DSG+ Q + L+ A+++LS LR + +
Sbjct: 123 PYVSYIKELWEDSGI--QECYDRRREYQLTDSAKYYLSDLRRLAV 165
>AF003739-2|AAM15593.1| 303|Caenorhabditis elegans Egg laying
defective protein 30,isoform b protein.
Length = 303
Score = 27.9 bits (59), Expect = 4.0
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = -1
Query: 468 PHVWLLKELLKDSGVGFQSTFGSLAVIPLSPVARFFLSCLRAIQI 334
P+V +KEL +DSG+ Q + L+ A+++LS LR + +
Sbjct: 71 PYVSYIKELWEDSGI--QECYDRRREYQLTDSAKYYLSDLRRLAV 113
>AF003739-1|AAB58071.1| 355|Caenorhabditis elegans Egg laying
defective protein 30,isoform a protein.
Length = 355
Score = 27.9 bits (59), Expect = 4.0
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = -1
Query: 468 PHVWLLKELLKDSGVGFQSTFGSLAVIPLSPVARFFLSCLRAIQI 334
P+V +KEL +DSG+ Q + L+ A+++LS LR + +
Sbjct: 123 PYVSYIKELWEDSGI--QECYDRRREYQLTDSAKYYLSDLRRLAV 165
>Z81579-7|CAB61019.1| 927|Caenorhabditis elegans Hypothetical
protein R13H4.4a protein.
Length = 927
Score = 27.1 bits (57), Expect = 7.0
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +3
Query: 405 RRSIENRPLSPSKALSKATR 464
RR+ E RPL P+K L++ TR
Sbjct: 882 RRASERRPLQPAKVLAEFTR 901
>Z81118-3|CAB03325.1| 346|Caenorhabditis elegans Hypothetical
protein T10G3.2 protein.
Length = 346
Score = 27.1 bits (57), Expect = 7.0
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -1
Query: 246 YLAFPFIGYDFLGQNYTNIPNIAQH 172
+LA I + F G+NY P IA H
Sbjct: 71 FLAIRNITFSFYGENYGKAPRIADH 95
>AF016852-1|AAB94551.1| 927|Caenorhabditis elegans HMP-1 protein.
Length = 927
Score = 27.1 bits (57), Expect = 7.0
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +3
Query: 405 RRSIENRPLSPSKALSKATR 464
RR+ E RPL P+K L++ TR
Sbjct: 882 RRASERRPLQPAKVLAEFTR 901
>Z75554-3|CAA99955.2| 533|Caenorhabditis elegans Hypothetical
protein ZC455.4 protein.
Length = 533
Score = 26.6 bits (56), Expect = 9.3
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = -1
Query: 222 YDFLGQNYTNIPNIAQH-APAGSSINQLLHYFQLVNSGEFHKFDYRKQKNIKIYGY 58
Y F Y + +A H A AG+ + YFQ E+H K+K+IKI+ Y
Sbjct: 29 YGFSHMKY--MAELANHLARAGNDVT----YFQPFVVDEYHDHTLIKEKSIKIWNY 78
>U39648-3|AAM15603.1| 434|Caenorhabditis elegans Hypothetical
protein T13C5.2 protein.
Length = 434
Score = 26.6 bits (56), Expect = 9.3
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -3
Query: 382 ITSRPVFPELFESHSNFVQSDVRDNMKYKNYPFRNYASC-YHSHT 251
I S P + + HS+ +S+ +N Y NY + + C YH+H+
Sbjct: 159 IISNDNLPRVVDHHSHCRRSNNNNNYDY-NYNYHHNNCCNYHNHS 202
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,284,382
Number of Sequences: 27780
Number of extensions: 226594
Number of successful extensions: 651
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 637
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 651
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 882200194
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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