Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_E21
         (579 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    25   0.71 
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           25   0.71 
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    23   2.9  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    23   2.9  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   6.7  

>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 24.6 bits (51), Expect = 0.71
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -2

Query: 86  LPYCIGTIQTDKYVNKCLYFNRAAINPR 3
           +P  IG +   K+   CL + +  +NPR
Sbjct: 69  IPAWIGELSATKFGFPCLQYTQLPVNPR 96


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 24.6 bits (51), Expect = 0.71
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -2

Query: 86  LPYCIGTIQTDKYVNKCLYFNRAAINPR 3
           +P  IG +   K+   CL + +  +NPR
Sbjct: 69  IPAWIGELSATKFGFPCLQYTQLPVNPR 96


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 10/39 (25%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
 Frame = +3

Query: 69  TYTVRKVLSRSSRYSLC--WKSPSAPVCVKAALSTVRVI 179
           T  + ++   +SR ++   + SP++ VC+ AAL  ++++
Sbjct: 602 TNRIARIFDSASRTAVRPRYISPASQVCIAAALIALQIV 640


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 10/39 (25%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
 Frame = +3

Query: 69  TYTVRKVLSRSSRYSLC--WKSPSAPVCVKAALSTVRVI 179
           T  + ++   +SR ++   + SP++ VC+ AAL  ++++
Sbjct: 692 TNRIARIFDSASRTAVRPRYISPASQVCIAAALIALQIV 730


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +2

Query: 173 RYKFNSINTQSPWNNEENHI 232
           RYK    N    W ++E HI
Sbjct: 178 RYKEEESNENYNWEHKETHI 197


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,886
Number of Sequences: 438
Number of extensions: 3328
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16748661
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)