Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_E20
         (414 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   1.4  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   1.4  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    22   2.4  
AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    22   2.4  
DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex det...    20   9.6  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    20   9.6  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 9/34 (26%), Positives = 18/34 (52%)
 Frame = +1

Query: 130 VVNHGLTSHICCILHANISHIILRFSWSFDLLSE 231
           ++   +T H   I H NISH+++     +  ++E
Sbjct: 469 MIGQYVTVHGDVISHVNISHVMVEDGGEYSCMAE 502


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 9/34 (26%), Positives = 18/34 (52%)
 Frame = +1

Query: 130 VVNHGLTSHICCILHANISHIILRFSWSFDLLSE 231
           ++   +T H   I H NISH+++     +  ++E
Sbjct: 469 MIGQYVTVHGDVISHVNISHVMVEDGGEYSCMAE 502


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 22.2 bits (45), Expect = 2.4
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +1

Query: 157 ICCILHANISHIILRFSWSFDL 222
           +C ILH   + I LR  W F+L
Sbjct: 216 MCDILHLRHTKIWLRPDWLFNL 237


>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 22.2 bits (45), Expect = 2.4
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +2

Query: 155 TFVVFYMLIYLILYFGLVGAL 217
           T +V   +I++I +FG  GA+
Sbjct: 54  TLIVLGSIIFVISFFGCCGAI 74


>DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 20.2 bits (40), Expect = 9.6
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = -1

Query: 195 YNMRYISM*NTTNVRSKPMIHYNV 124
           YN  Y +  N  N   K + +YN+
Sbjct: 94  YNNNYNNYNNNYNTNYKKLQYYNI 117


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 20.2 bits (40), Expect = 9.6
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = +1

Query: 232 QIFRRQLCNNKVSIPLYT 285
           Q+ +RQLC  +  + + T
Sbjct: 74  QLLKRQLCEKRKEVSIIT 91


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,485
Number of Sequences: 438
Number of extensions: 2021
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10503195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)