Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_E16
(650 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M34079-1|AAA36666.1| 404|Homo sapiens protein ( Human immunodef... 79 2e-14
CR456731-1|CAG33012.1| 404|Homo sapiens PSMC3 protein. 79 2e-14
BC107804-1|AAI07805.1| 491|Homo sapiens PSMC3 protein protein. 79 2e-14
BC106920-1|AAI06921.1| 439|Homo sapiens proteasome (prosome, ma... 79 2e-14
BC073165-1|AAH73165.3| 439|Homo sapiens proteasome (prosome, ma... 79 2e-14
BC008713-1|AAH08713.4| 439|Homo sapiens proteasome (prosome, ma... 79 2e-14
AK222485-1|BAD96205.1| 424|Homo sapiens proteasome 26S ATPase s... 79 2e-14
X89887-1|CAA61979.1| 1017|Homo sapiens HIRA protein. 31 2.7
X81844-1|CAA57436.1| 1017|Homo sapiens HIRA protein. 31 2.7
X77633-1|CAA54721.1| 973|Homo sapiens HIRAHs protein. 31 2.7
X75296-1|CAA53044.1| 766|Homo sapiens TUP1 like enhancer of SPL... 31 2.7
CR456503-1|CAG30389.1| 1017|Homo sapiens HIRA protein. 31 2.7
BC039835-1|AAH39835.1| 1017|Homo sapiens HIR histone cell cycle ... 31 2.7
U47007-1|AAC50588.1| 486|Homo sapiens NAB1 protein. 31 3.6
BC035724-1|AAH35724.1| 487|Homo sapiens NGFI-A binding protein ... 31 3.6
AF045452-1|AAC25086.1| 458|Homo sapiens transcriptional regulat... 31 3.6
AF045451-1|AAC25085.1| 487|Homo sapiens transcriptional regulat... 31 3.6
AC006460-1|AAX93076.1| 487|Homo sapiens unknown protein. 31 3.6
>M34079-1|AAA36666.1| 404|Homo sapiens protein ( Human
immunodeficiency virus tat transactivator binding
protein-1 (tbp-1) mRNA, complete cds. ).
Length = 404
Score = 78.6 bits (185), Expect = 2e-14
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +2
Query: 533 TRQTYFLPVIGLVDPDKLKPGDLVGVNKDSYLILETLP 646
TRQTYFLPVIGLVD +KLKPGDLVGVNKDSYLILETLP
Sbjct: 93 TRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLP 130
Score = 72.5 bits (170), Expect = 1e-12
Identities = 33/38 (86%), Positives = 36/38 (94%)
Frame = +3
Query: 339 KYKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEEDGA 452
K KEN+EKIKVNKTLPYLVSNVIELLDVDP ++EEDGA
Sbjct: 37 KIKENSEKIKVNKTLPYLVSNVIELLDVDPNDQEEDGA 74
Score = 38.7 bits (86), Expect = 0.018
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = +1
Query: 172 MPTDEIISRTRLLDNEIKIMKS 237
M T+EII RTRLLD+EIKIMKS
Sbjct: 1 MSTEEIIQRTRLLDSEIKIMKS 22
>CR456731-1|CAG33012.1| 404|Homo sapiens PSMC3 protein.
Length = 404
Score = 78.6 bits (185), Expect = 2e-14
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +2
Query: 533 TRQTYFLPVIGLVDPDKLKPGDLVGVNKDSYLILETLP 646
TRQTYFLPVIGLVD +KLKPGDLVGVNKDSYLILETLP
Sbjct: 93 TRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLP 130
Score = 72.5 bits (170), Expect = 1e-12
Identities = 33/38 (86%), Positives = 36/38 (94%)
Frame = +3
Query: 339 KYKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEEDGA 452
K KEN+EKIKVNKTLPYLVSNVIELLDVDP ++EEDGA
Sbjct: 37 KIKENSEKIKVNKTLPYLVSNVIELLDVDPNDQEEDGA 74
Score = 38.7 bits (86), Expect = 0.018
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = +1
Query: 172 MPTDEIISRTRLLDNEIKIMKS 237
M T+EII RTRLLD+EIKIMKS
Sbjct: 1 MSTEEIIQRTRLLDSEIKIMKS 22
>BC107804-1|AAI07805.1| 491|Homo sapiens PSMC3 protein protein.
Length = 491
Score = 78.6 bits (185), Expect = 2e-14
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +2
Query: 533 TRQTYFLPVIGLVDPDKLKPGDLVGVNKDSYLILETLP 646
TRQTYFLPVIGLVD +KLKPGDLVGVNKDSYLILETLP
Sbjct: 180 TRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLP 217
Score = 72.5 bits (170), Expect = 1e-12
Identities = 33/38 (86%), Positives = 36/38 (94%)
Frame = +3
Query: 339 KYKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEEDGA 452
K KEN+EKIKVNKTLPYLVSNVIELLDVDP ++EEDGA
Sbjct: 124 KIKENSEKIKVNKTLPYLVSNVIELLDVDPNDQEEDGA 161
Score = 53.6 bits (123), Expect = 6e-07
Identities = 24/39 (61%), Positives = 33/39 (84%), Gaps = 1/39 (2%)
Frame = +1
Query: 124 SIWEDGEE-ALSEEVLRMPTDEIISRTRLLDNEIKIMKS 237
++W++ E+ + EEVL+M T+EII RTRLLD+EIKIMKS
Sbjct: 71 TVWDEAEQDGIGEEVLKMSTEEIIQRTRLLDSEIKIMKS 109
>BC106920-1|AAI06921.1| 439|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 3 protein.
Length = 439
Score = 78.6 bits (185), Expect = 2e-14
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +2
Query: 533 TRQTYFLPVIGLVDPDKLKPGDLVGVNKDSYLILETLP 646
TRQTYFLPVIGLVD +KLKPGDLVGVNKDSYLILETLP
Sbjct: 128 TRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLP 165
Score = 72.5 bits (170), Expect = 1e-12
Identities = 33/38 (86%), Positives = 36/38 (94%)
Frame = +3
Query: 339 KYKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEEDGA 452
K KEN+EKIKVNKTLPYLVSNVIELLDVDP ++EEDGA
Sbjct: 72 KIKENSEKIKVNKTLPYLVSNVIELLDVDPNDQEEDGA 109
Score = 53.6 bits (123), Expect = 6e-07
Identities = 24/39 (61%), Positives = 33/39 (84%), Gaps = 1/39 (2%)
Frame = +1
Query: 124 SIWEDGEE-ALSEEVLRMPTDEIISRTRLLDNEIKIMKS 237
++W++ E+ + EEVL+M T+EII RTRLLD+EIKIMKS
Sbjct: 19 TVWDEAEQDGIGEEVLKMSTEEIIQRTRLLDSEIKIMKS 57
>BC073165-1|AAH73165.3| 439|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 3 protein.
Length = 439
Score = 78.6 bits (185), Expect = 2e-14
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +2
Query: 533 TRQTYFLPVIGLVDPDKLKPGDLVGVNKDSYLILETLP 646
TRQTYFLPVIGLVD +KLKPGDLVGVNKDSYLILETLP
Sbjct: 128 TRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLP 165
Score = 72.5 bits (170), Expect = 1e-12
Identities = 33/38 (86%), Positives = 36/38 (94%)
Frame = +3
Query: 339 KYKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEEDGA 452
K KEN+EKIKVNKTLPYLVSNVIELLDVDP ++EEDGA
Sbjct: 72 KIKENSEKIKVNKTLPYLVSNVIELLDVDPNDQEEDGA 109
Score = 53.6 bits (123), Expect = 6e-07
Identities = 24/39 (61%), Positives = 33/39 (84%), Gaps = 1/39 (2%)
Frame = +1
Query: 124 SIWEDGEE-ALSEEVLRMPTDEIISRTRLLDNEIKIMKS 237
++W++ E+ + EEVL+M T+EII RTRLLD+EIKIMKS
Sbjct: 19 TVWDEAEQDGIGEEVLKMSTEEIIQRTRLLDSEIKIMKS 57
>BC008713-1|AAH08713.4| 439|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 3 protein.
Length = 439
Score = 78.6 bits (185), Expect = 2e-14
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +2
Query: 533 TRQTYFLPVIGLVDPDKLKPGDLVGVNKDSYLILETLP 646
TRQTYFLPVIGLVD +KLKPGDLVGVNKDSYLILETLP
Sbjct: 128 TRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLP 165
Score = 72.5 bits (170), Expect = 1e-12
Identities = 33/38 (86%), Positives = 36/38 (94%)
Frame = +3
Query: 339 KYKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEEDGA 452
K KEN+EKIKVNKTLPYLVSNVIELLDVDP ++EEDGA
Sbjct: 72 KIKENSEKIKVNKTLPYLVSNVIELLDVDPNDQEEDGA 109
Score = 53.6 bits (123), Expect = 6e-07
Identities = 24/39 (61%), Positives = 33/39 (84%), Gaps = 1/39 (2%)
Frame = +1
Query: 124 SIWEDGEE-ALSEEVLRMPTDEIISRTRLLDNEIKIMKS 237
++W++ E+ + EEVL+M T+EII RTRLLD+EIKIMKS
Sbjct: 19 TVWDEAEQDGIGEEVLKMSTEEIIQRTRLLDSEIKIMKS 57
>AK222485-1|BAD96205.1| 424|Homo sapiens proteasome 26S ATPase
subunit 3 variant protein.
Length = 424
Score = 78.6 bits (185), Expect = 2e-14
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +2
Query: 533 TRQTYFLPVIGLVDPDKLKPGDLVGVNKDSYLILETLP 646
TRQTYFLPVIGLVD +KLKPGDLVGVNKDSYLILETLP
Sbjct: 113 TRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLP 150
Score = 72.5 bits (170), Expect = 1e-12
Identities = 33/38 (86%), Positives = 36/38 (94%)
Frame = +3
Query: 339 KYKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEEDGA 452
K KEN+EKIKVNKTLPYLVSNVIELLDVDP ++EEDGA
Sbjct: 57 KIKENSEKIKVNKTLPYLVSNVIELLDVDPNDQEEDGA 94
Score = 53.6 bits (123), Expect = 6e-07
Identities = 24/39 (61%), Positives = 33/39 (84%), Gaps = 1/39 (2%)
Frame = +1
Query: 124 SIWEDGEE-ALSEEVLRMPTDEIISRTRLLDNEIKIMKS 237
++W++ E+ + EEVL+M T+EII RTRLLD+EIKIMKS
Sbjct: 4 TVWDEAEQDGIGEEVLKMSTEEIIQRTRLLDSEIKIMKS 42
>X89887-1|CAA61979.1| 1017|Homo sapiens HIRA protein.
Length = 1017
Score = 31.5 bits (68), Expect = 2.7
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -1
Query: 557 LVRSKFDVFEGFEFNWRKCCHXLXGPCPEXQGSNY-STV 444
LV +++ V EGFE+ R+ C L GP GS + STV
Sbjct: 940 LVYARYLVNEGFEYRLREICKDLLGPVHYSTGSQWESTV 978
>X81844-1|CAA57436.1| 1017|Homo sapiens HIRA protein.
Length = 1017
Score = 31.5 bits (68), Expect = 2.7
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -1
Query: 557 LVRSKFDVFEGFEFNWRKCCHXLXGPCPEXQGSNY-STV 444
LV +++ V EGFE+ R+ C L GP GS + STV
Sbjct: 940 LVYARYLVNEGFEYRLREICKDLLGPVHYSTGSQWESTV 978
>X77633-1|CAA54721.1| 973|Homo sapiens HIRAHs protein.
Length = 973
Score = 31.5 bits (68), Expect = 2.7
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -1
Query: 557 LVRSKFDVFEGFEFNWRKCCHXLXGPCPEXQGSNY-STV 444
LV +++ V EGFE+ R+ C L GP GS + STV
Sbjct: 896 LVYARYLVNEGFEYRLREICKDLLGPVHYSTGSQWESTV 934
>X75296-1|CAA53044.1| 766|Homo sapiens TUP1 like enhancer of SPLIT
gene 1 protein.
Length = 766
Score = 31.5 bits (68), Expect = 2.7
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -1
Query: 557 LVRSKFDVFEGFEFNWRKCCHXLXGPCPEXQGSNY-STV 444
LV +++ V EGFE+ R+ C L GP GS + STV
Sbjct: 689 LVYARYLVNEGFEYRLREICKDLLGPVHYSTGSQWESTV 727
>CR456503-1|CAG30389.1| 1017|Homo sapiens HIRA protein.
Length = 1017
Score = 31.5 bits (68), Expect = 2.7
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -1
Query: 557 LVRSKFDVFEGFEFNWRKCCHXLXGPCPEXQGSNY-STV 444
LV +++ V EGFE+ R+ C L GP GS + STV
Sbjct: 940 LVYARYLVNEGFEYRLREICKDLLGPVHYSTGSQWESTV 978
>BC039835-1|AAH39835.1| 1017|Homo sapiens HIR histone cell cycle
regulation defective homolog A (S. cerevisiae) protein.
Length = 1017
Score = 31.5 bits (68), Expect = 2.7
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -1
Query: 557 LVRSKFDVFEGFEFNWRKCCHXLXGPCPEXQGSNY-STV 444
LV +++ V EGFE+ R+ C L GP GS + STV
Sbjct: 940 LVYARYLVNEGFEYRLREICKDLLGPVHYSTGSQWESTV 978
>U47007-1|AAC50588.1| 486|Homo sapiens NAB1 protein.
Length = 486
Score = 31.1 bits (67), Expect = 3.6
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 348 ENTEKIKVNKTLPYLVSNVIELLDVDPQEEEE 443
E E +K NK L ++ ++ E+ D DP +EEE
Sbjct: 217 EVKELLKTNKKLAKMIGHIFEMNDDDPHKEEE 248
>BC035724-1|AAH35724.1| 487|Homo sapiens NGFI-A binding protein 1
(EGR1 binding protein 1) protein.
Length = 487
Score = 31.1 bits (67), Expect = 3.6
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 348 ENTEKIKVNKTLPYLVSNVIELLDVDPQEEEE 443
E E +K NK L ++ ++ E+ D DP +EEE
Sbjct: 217 EVKELLKTNKKLAKMIGHIFEMNDDDPHKEEE 248
>AF045452-1|AAC25086.1| 458|Homo sapiens transcriptional regulatory
protein p54 protein.
Length = 458
Score = 31.1 bits (67), Expect = 3.6
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 348 ENTEKIKVNKTLPYLVSNVIELLDVDPQEEEE 443
E E +K NK L ++ ++ E+ D DP +EEE
Sbjct: 217 EVKELLKTNKKLAKMIGHIFEMNDDDPHKEEE 248
>AF045451-1|AAC25085.1| 487|Homo sapiens transcriptional regulatory
protein p54 protein.
Length = 487
Score = 31.1 bits (67), Expect = 3.6
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 348 ENTEKIKVNKTLPYLVSNVIELLDVDPQEEEE 443
E E +K NK L ++ ++ E+ D DP +EEE
Sbjct: 217 EVKELLKTNKKLAKMIGHIFEMNDDDPHKEEE 248
>AC006460-1|AAX93076.1| 487|Homo sapiens unknown protein.
Length = 487
Score = 31.1 bits (67), Expect = 3.6
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 348 ENTEKIKVNKTLPYLVSNVIELLDVDPQEEEE 443
E E +K NK L ++ ++ E+ D DP +EEE
Sbjct: 217 EVKELLKTNKKLAKMIGHIFEMNDDDPHKEEE 248
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,448,674
Number of Sequences: 237096
Number of extensions: 1679204
Number of successful extensions: 3047
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2999
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3047
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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