Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_E16
         (650 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF160882-1|AAD46823.1|  428|Drosophila melanogaster GH12068p pro...    85   8e-17
AF145305-1|AAF08386.1|  428|Drosophila melanogaster 26S proteaso...    85   8e-17
AE014297-3377|AAF56177.1|  428|Drosophila melanogaster CG10370-P...    85   8e-17
AF134402-1|AAD24194.1|  431|Drosophila melanogaster Tat-binding ...    84   2e-16

>AF160882-1|AAD46823.1|  428|Drosophila melanogaster GH12068p
           protein.
          Length = 428

 Score = 85.0 bits (201), Expect = 8e-17
 Identities = 39/46 (84%), Positives = 43/46 (93%)
 Frame = +1

Query: 100 MATTLEDKSIWEDGEEALSEEVLRMPTDEIISRTRLLDNEIKIMKS 237
           MA TLEDKSIWEDGEE+L EEV+RM TDEI+SRTRL+DNEIKIMKS
Sbjct: 1   MAQTLEDKSIWEDGEESLGEEVMRMSTDEIVSRTRLMDNEIKIMKS 46



 Score = 78.2 bits (184), Expect = 9e-15
 Identities = 36/39 (92%), Positives = 37/39 (94%)
 Frame = +2

Query: 533 TRQTYFLPVIGLVDPDKLKPGDLVGVNKDSYLILETLPA 649
           TRQ YFLPVIGLVD +KLKPGDLVGVNKDSYLILETLPA
Sbjct: 117 TRQAYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPA 155



 Score = 76.6 bits (180), Expect = 3e-14
 Identities = 35/39 (89%), Positives = 38/39 (97%)
 Frame = +3

Query: 339 KYKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEEDGAV 455
           K K+NTEKIKVNKTLPYLVSNVIELLDVDPQEEE+DG+V
Sbjct: 61  KIKDNTEKIKVNKTLPYLVSNVIELLDVDPQEEEDDGSV 99


>AF145305-1|AAF08386.1|  428|Drosophila melanogaster 26S proteasome
           regulatory complexsubunit p50 protein.
          Length = 428

 Score = 85.0 bits (201), Expect = 8e-17
 Identities = 39/46 (84%), Positives = 43/46 (93%)
 Frame = +1

Query: 100 MATTLEDKSIWEDGEEALSEEVLRMPTDEIISRTRLLDNEIKIMKS 237
           MA TLEDKSIWEDGEE+L EEV+RM TDEI+SRTRL+DNEIKIMKS
Sbjct: 1   MAQTLEDKSIWEDGEESLGEEVMRMSTDEIVSRTRLMDNEIKIMKS 46



 Score = 78.2 bits (184), Expect = 9e-15
 Identities = 36/39 (92%), Positives = 37/39 (94%)
 Frame = +2

Query: 533 TRQTYFLPVIGLVDPDKLKPGDLVGVNKDSYLILETLPA 649
           TRQ YFLPVIGLVD +KLKPGDLVGVNKDSYLILETLPA
Sbjct: 117 TRQAYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPA 155



 Score = 76.6 bits (180), Expect = 3e-14
 Identities = 35/39 (89%), Positives = 38/39 (97%)
 Frame = +3

Query: 339 KYKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEEDGAV 455
           K K+NTEKIKVNKTLPYLVSNVIELLDVDPQEEE+DG+V
Sbjct: 61  KIKDNTEKIKVNKTLPYLVSNVIELLDVDPQEEEDDGSV 99


>AE014297-3377|AAF56177.1|  428|Drosophila melanogaster CG10370-PA
           protein.
          Length = 428

 Score = 85.0 bits (201), Expect = 8e-17
 Identities = 39/46 (84%), Positives = 43/46 (93%)
 Frame = +1

Query: 100 MATTLEDKSIWEDGEEALSEEVLRMPTDEIISRTRLLDNEIKIMKS 237
           MA TLEDKSIWEDGEE+L EEV+RM TDEI+SRTRL+DNEIKIMKS
Sbjct: 1   MAQTLEDKSIWEDGEESLGEEVMRMSTDEIVSRTRLMDNEIKIMKS 46



 Score = 78.2 bits (184), Expect = 9e-15
 Identities = 36/39 (92%), Positives = 37/39 (94%)
 Frame = +2

Query: 533 TRQTYFLPVIGLVDPDKLKPGDLVGVNKDSYLILETLPA 649
           TRQ YFLPVIGLVD +KLKPGDLVGVNKDSYLILETLPA
Sbjct: 117 TRQAYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPA 155



 Score = 76.6 bits (180), Expect = 3e-14
 Identities = 35/39 (89%), Positives = 38/39 (97%)
 Frame = +3

Query: 339 KYKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEEDGAV 455
           K K+NTEKIKVNKTLPYLVSNVIELLDVDPQEEE+DG+V
Sbjct: 61  KIKDNTEKIKVNKTLPYLVSNVIELLDVDPQEEEDDGSV 99


>AF134402-1|AAD24194.1|  431|Drosophila melanogaster Tat-binding
           protein-1 protein.
          Length = 431

 Score = 83.8 bits (198), Expect = 2e-16
 Identities = 38/48 (79%), Positives = 44/48 (91%)
 Frame = +1

Query: 94  ITMATTLEDKSIWEDGEEALSEEVLRMPTDEIISRTRLLDNEIKIMKS 237
           + MA TLEDKSIWEDGEE+L E+V+RM TDEI+SRTRL+DNEIKIMKS
Sbjct: 3   LDMAQTLEDKSIWEDGEESLGEKVMRMSTDEIVSRTRLMDNEIKIMKS 50



 Score = 76.6 bits (180), Expect = 3e-14
 Identities = 35/39 (89%), Positives = 38/39 (97%)
 Frame = +3

Query: 339 KYKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEEDGAV 455
           K K+NTEKIKVNKTLPYLVSNVIELLDVDPQEEE+DG+V
Sbjct: 65  KIKDNTEKIKVNKTLPYLVSNVIELLDVDPQEEEDDGSV 103



 Score = 74.1 bits (174), Expect = 1e-13
 Identities = 34/39 (87%), Positives = 35/39 (89%)
 Frame = +2

Query: 533 TRQTYFLPVIGLVDPDKLKPGDLVGVNKDSYLILETLPA 649
           TRQ YFLPVIGLVD +KLKPGDL GVNKD YLILETLPA
Sbjct: 121 TRQAYFLPVIGLVDAEKLKPGDLAGVNKDFYLILETLPA 159


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,104,388
Number of Sequences: 53049
Number of extensions: 480636
Number of successful extensions: 1127
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1127
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)