Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_E08
(454 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92826-8|CAI79117.1| 325|Caenorhabditis elegans Hypothetical pr... 29 1.2
Z81475-12|CAI79149.1| 325|Caenorhabditis elegans Hypothetical p... 29 1.2
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 29 1.2
AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated... 29 1.2
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 29 1.2
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 29 1.2
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 29 1.2
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 29 1.2
Z49128-1|CAA88953.1| 379|Caenorhabditis elegans Hypothetical pr... 27 4.8
U97593-7|AAB52878.1| 591|Caenorhabditis elegans Prion-like-(q/n... 27 6.4
U97593-6|AAB52879.2| 925|Caenorhabditis elegans Prion-like-(q/n... 27 6.4
U97593-5|AAB52880.1| 1175|Caenorhabditis elegans Prion-like-(q/n... 27 6.4
U80436-7|AAC71109.1| 1638|Caenorhabditis elegans Uncoordinated p... 27 6.4
U80436-5|AAT68892.1| 2140|Caenorhabditis elegans Uncoordinated p... 27 6.4
U80436-1|AAC71108.1| 2488|Caenorhabditis elegans Uncoordinated p... 27 6.4
U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily ass... 27 6.4
AF048835-1|AAC12932.1| 1638|Caenorhabditis elegans guanine nucle... 27 6.4
AF048834-1|AAC12931.1| 2488|Caenorhabditis elegans guanine nucle... 27 6.4
Z93385-8|CAN86626.1| 560|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z93385-7|CAN86625.1| 556|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z93385-6|CAB07641.1| 558|Caenorhabditis elegans Hypothetical pr... 27 8.4
>Z92826-8|CAI79117.1| 325|Caenorhabditis elegans Hypothetical
protein C18D11.7 protein.
Length = 325
Score = 29.5 bits (63), Expect = 1.2
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +1
Query: 265 ITDLKIYLAGHTSKYPYPILYDTDLKLKSSKLHFDDKERYERMPFVKTGCDTFD 426
I D K ++A + P I Y + +K+ HF ER E PF + DT+D
Sbjct: 39 IKDRKFHIAAFFKETP-EIEYQSSVKIWFKDEHFSYYERSEPFPFEEKCEDTYD 91
>Z81475-12|CAI79149.1| 325|Caenorhabditis elegans Hypothetical
protein C18D11.7 protein.
Length = 325
Score = 29.5 bits (63), Expect = 1.2
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +1
Query: 265 ITDLKIYLAGHTSKYPYPILYDTDLKLKSSKLHFDDKERYERMPFVKTGCDTFD 426
I D K ++A + P I Y + +K+ HF ER E PF + DT+D
Sbjct: 39 IKDRKFHIAAFFKETP-EIEYQSSVKIWFKDEHFSYYERSEPFPFEEKCEDTYD 91
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 29.5 bits (63), Expect = 1.2
Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 2/85 (2%)
Frame = +1
Query: 130 YQLKVPNKQADIVVSFETTQSNEQSYKDLVMPLITQLVDNLKSKQITDLKIYLAGHTSKY 309
Y L++PN Q + ++ SN+ D L +L D+ K K ++ L T K
Sbjct: 4354 YSLEIPNAQVEDAADYKVVVSNDAGDADSSAALTVKLADDGKDKVKPEIVSGLIPTTVKQ 4413
Query: 310 PYPILYDTDLK--LKSSKLHFDDKE 378
++ +K +K K + + KE
Sbjct: 4414 GETATFNVKVKGPVKQVKWYKNGKE 4438
>AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated
protein 89, isoform e protein.
Length = 5992
Score = 29.5 bits (63), Expect = 1.2
Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 2/85 (2%)
Frame = +1
Query: 130 YQLKVPNKQADIVVSFETTQSNEQSYKDLVMPLITQLVDNLKSKQITDLKIYLAGHTSKY 309
Y L++PN Q + ++ SN+ D L +L D+ K K ++ L T K
Sbjct: 3714 YSLEIPNAQVEDAADYKVVVSNDAGDADSSAALTVKLADDGKDKVKPEIVSGLIPTTVKQ 3773
Query: 310 PYPILYDTDLK--LKSSKLHFDDKE 378
++ +K +K K + + KE
Sbjct: 3774 GETATFNVKVKGPVKQVKWYKNGKE 3798
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 29.5 bits (63), Expect = 1.2
Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 2/85 (2%)
Frame = +1
Query: 130 YQLKVPNKQADIVVSFETTQSNEQSYKDLVMPLITQLVDNLKSKQITDLKIYLAGHTSKY 309
Y L++PN Q + ++ SN+ D L +L D+ K K ++ L T K
Sbjct: 4354 YSLEIPNAQVEDAADYKVVVSNDAGDADSSAALTVKLADDGKDKVKPEIVSGLIPTTVKQ 4413
Query: 310 PYPILYDTDLK--LKSSKLHFDDKE 378
++ +K +K K + + KE
Sbjct: 4414 GETATFNVKVKGPVKQVKWYKNGKE 4438
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 29.5 bits (63), Expect = 1.2
Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 2/85 (2%)
Frame = +1
Query: 130 YQLKVPNKQADIVVSFETTQSNEQSYKDLVMPLITQLVDNLKSKQITDLKIYLAGHTSKY 309
Y L++PN Q + ++ SN+ D L +L D+ K K ++ L T K
Sbjct: 4354 YSLEIPNAQVEDAADYKVVVSNDAGDADSSAALTVKLADDGKDKVKPEIVSGLIPTTVKQ 4413
Query: 310 PYPILYDTDLK--LKSSKLHFDDKE 378
++ +K +K K + + KE
Sbjct: 4414 GETATFNVKVKGPVKQVKWYKNGKE 4438
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 29.5 bits (63), Expect = 1.2
Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 2/85 (2%)
Frame = +1
Query: 130 YQLKVPNKQADIVVSFETTQSNEQSYKDLVMPLITQLVDNLKSKQITDLKIYLAGHTSKY 309
Y L++PN Q + ++ SN+ D L +L D+ K K ++ L T K
Sbjct: 3714 YSLEIPNAQVEDAADYKVVVSNDAGDADSSAALTVKLADDGKDKVKPEIVSGLIPTTVKQ 3773
Query: 310 PYPILYDTDLK--LKSSKLHFDDKE 378
++ +K +K K + + KE
Sbjct: 3774 GETATFNVKVKGPVKQVKWYKNGKE 3798
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 29.5 bits (63), Expect = 1.2
Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 2/85 (2%)
Frame = +1
Query: 130 YQLKVPNKQADIVVSFETTQSNEQSYKDLVMPLITQLVDNLKSKQITDLKIYLAGHTSKY 309
Y L++PN Q + ++ SN+ D L +L D+ K K ++ L T K
Sbjct: 4354 YSLEIPNAQVEDAADYKVVVSNDAGDADSSAALTVKLADDGKDKVKPEIVSGLIPTTVKQ 4413
Query: 310 PYPILYDTDLK--LKSSKLHFDDKE 378
++ +K +K K + + KE
Sbjct: 4414 GETATFNVKVKGPVKQVKWYKNGKE 4438
>Z49128-1|CAA88953.1| 379|Caenorhabditis elegans Hypothetical
protein M03C11.1 protein.
Length = 379
Score = 27.5 bits (58), Expect = 4.8
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +1
Query: 283 YLAGHTSKYPYPILYDTDL-KLKSSKLHFDDKERYERMPFVK 405
Y+A S PYP + TDL + +S L FD ++R + +K
Sbjct: 242 YVAFRESSIPYPAHWPTDLIQFINSMLKFDKEKRLVGLEAIK 283
>U97593-7|AAB52878.1| 591|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform b protein.
Length = 591
Score = 27.1 bits (57), Expect = 6.4
Identities = 16/64 (25%), Positives = 25/64 (39%), Gaps = 1/64 (1%)
Frame = +1
Query: 25 RGYAALALTGLLPAVLPDACVRCTDADKPHAIGDVYQLKVP-NKQADIVVSFETTQSNEQ 201
R Y T +P++ P V D + DV+ K N+ + F T + E
Sbjct: 464 RNYEEKTETTTVPSLAPATNVTYKDLSNAQCVDDVFNKKTEMNESLPVGSVFNTHNNTEG 523
Query: 202 SYKD 213
Y+D
Sbjct: 524 GYRD 527
>U97593-6|AAB52879.2| 925|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform c protein.
Length = 925
Score = 27.1 bits (57), Expect = 6.4
Identities = 16/64 (25%), Positives = 25/64 (39%), Gaps = 1/64 (1%)
Frame = +1
Query: 25 RGYAALALTGLLPAVLPDACVRCTDADKPHAIGDVYQLKVP-NKQADIVVSFETTQSNEQ 201
R Y T +P++ P V D + DV+ K N+ + F T + E
Sbjct: 798 RNYEEKTETTTVPSLAPATNVTYKDLSNAQCVDDVFNKKTEMNESLPVGSVFNTHNNTEG 857
Query: 202 SYKD 213
Y+D
Sbjct: 858 GYRD 861
>U97593-5|AAB52880.1| 1175|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform a protein.
Length = 1175
Score = 27.1 bits (57), Expect = 6.4
Identities = 16/64 (25%), Positives = 25/64 (39%), Gaps = 1/64 (1%)
Frame = +1
Query: 25 RGYAALALTGLLPAVLPDACVRCTDADKPHAIGDVYQLKVP-NKQADIVVSFETTQSNEQ 201
R Y T +P++ P V D + DV+ K N+ + F T + E
Sbjct: 1048 RNYEEKTETTTVPSLAPATNVTYKDLSNAQCVDDVFNKKTEMNESLPVGSVFNTHNNTEG 1107
Query: 202 SYKD 213
Y+D
Sbjct: 1108 GYRD 1111
>U80436-7|AAC71109.1| 1638|Caenorhabditis elegans Uncoordinated
protein 73, isoform b protein.
Length = 1638
Score = 27.1 bits (57), Expect = 6.4
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +1
Query: 199 QSYKDLVMPLITQLVDNLKSKQITDLKIYLAGHTSKYPYP-ILYDTDLKLKSSKLHFDDK 375
++Y+ V+P++ QL S +TD + AG TS Y DL K H D K
Sbjct: 945 KTYETAVLPILNQLESEYHSPTVTD---WCAGCTSSIDADRAAYVADLLSK----HMDYK 997
Query: 376 ERY 384
ER+
Sbjct: 998 ERF 1000
>U80436-5|AAT68892.1| 2140|Caenorhabditis elegans Uncoordinated
protein 73, isoform f protein.
Length = 2140
Score = 27.1 bits (57), Expect = 6.4
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +1
Query: 199 QSYKDLVMPLITQLVDNLKSKQITDLKIYLAGHTSKYPYP-ILYDTDLKLKSSKLHFDDK 375
++Y+ V+P++ QL S +TD + AG TS Y DL K H D K
Sbjct: 945 KTYETAVLPILNQLESEYHSPTVTD---WCAGCTSSIDADRAAYVADLLSK----HMDYK 997
Query: 376 ERY 384
ER+
Sbjct: 998 ERF 1000
>U80436-1|AAC71108.1| 2488|Caenorhabditis elegans Uncoordinated
protein 73, isoform a protein.
Length = 2488
Score = 27.1 bits (57), Expect = 6.4
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +1
Query: 199 QSYKDLVMPLITQLVDNLKSKQITDLKIYLAGHTSKYPYP-ILYDTDLKLKSSKLHFDDK 375
++Y+ V+P++ QL S +TD + AG TS Y DL K H D K
Sbjct: 945 KTYETAVLPILNQLESEYHSPTVTD---WCAGCTSSIDADRAAYVADLLSK----HMDYK 997
Query: 376 ERY 384
ER+
Sbjct: 998 ERF 1000
>U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily
assigned gene nameprotein 312 protein.
Length = 656
Score = 27.1 bits (57), Expect = 6.4
Identities = 19/67 (28%), Positives = 32/67 (47%)
Frame = +1
Query: 241 VDNLKSKQITDLKIYLAGHTSKYPYPILYDTDLKLKSSKLHFDDKERYERMPFVKTGCDT 420
V+NL S ++ K YL + P L D DL+ ++L D + E++ F++ DT
Sbjct: 6 VENLFSLCDSESKGYLTMEDLRKVCPQLDDNDLRFIFTELDQDGSGKIEKLEFLRGFQDT 65
Query: 421 FDKYEKN 441
E +
Sbjct: 66 VQHGESH 72
>AF048835-1|AAC12932.1| 1638|Caenorhabditis elegans guanine nucleotide
exchange factorUNC-73B protein.
Length = 1638
Score = 27.1 bits (57), Expect = 6.4
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +1
Query: 199 QSYKDLVMPLITQLVDNLKSKQITDLKIYLAGHTSKYPYP-ILYDTDLKLKSSKLHFDDK 375
++Y+ V+P++ QL S +TD + AG TS Y DL K H D K
Sbjct: 945 KTYETAVLPILNQLESEYHSPTVTD---WCAGCTSSIDADRAAYVADLLSK----HMDYK 997
Query: 376 ERY 384
ER+
Sbjct: 998 ERF 1000
>AF048834-1|AAC12931.1| 2488|Caenorhabditis elegans guanine nucleotide
exchange factorUNC-73A protein.
Length = 2488
Score = 27.1 bits (57), Expect = 6.4
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +1
Query: 199 QSYKDLVMPLITQLVDNLKSKQITDLKIYLAGHTSKYPYP-ILYDTDLKLKSSKLHFDDK 375
++Y+ V+P++ QL S +TD + AG TS Y DL K H D K
Sbjct: 945 KTYETAVLPILNQLESEYHSPTVTD---WCAGCTSSIDADRAAYVADLLSK----HMDYK 997
Query: 376 ERY 384
ER+
Sbjct: 998 ERF 1000
>Z93385-8|CAN86626.1| 560|Caenorhabditis elegans Hypothetical
protein M01E5.3c protein.
Length = 560
Score = 26.6 bits (56), Expect = 8.4
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 108 LVRVGAAHASVRQHSRQQSREGQRRVS 28
L+ VG AHA R+H Q+ + QR S
Sbjct: 417 LMVVGTAHAHYRRHMNAQAHQQQREPS 443
>Z93385-7|CAN86625.1| 556|Caenorhabditis elegans Hypothetical
protein M01E5.3b protein.
Length = 556
Score = 26.6 bits (56), Expect = 8.4
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 108 LVRVGAAHASVRQHSRQQSREGQRRVS 28
L+ VG AHA R+H Q+ + QR S
Sbjct: 417 LMVVGTAHAHYRRHMNAQAHQQQREPS 443
>Z93385-6|CAB07641.1| 558|Caenorhabditis elegans Hypothetical
protein M01E5.3a protein.
Length = 558
Score = 26.6 bits (56), Expect = 8.4
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 108 LVRVGAAHASVRQHSRQQSREGQRRVS 28
L+ VG AHA R+H Q+ + QR S
Sbjct: 417 LMVVGTAHAHYRRHMNAQAHQQQREPS 443
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,389,027
Number of Sequences: 27780
Number of extensions: 170900
Number of successful extensions: 449
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 440
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 449
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 799252350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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