Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_E07
(452 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB209471-1|BAD92708.1| 197|Homo sapiens ribosomal protein L12 v... 209 3e-54
L06505-1|AAA36157.1| 165|Homo sapiens ribosomal protein L12 pro... 207 1e-53
BC105603-1|AAI05604.1| 165|Homo sapiens ribosomal protein L12 p... 207 1e-53
BC094831-1|AAH94831.1| 165|Homo sapiens ribosomal protein L12 p... 207 1e-53
BC050644-1|AAH50644.1| 165|Homo sapiens ribosomal protein L12 p... 207 1e-53
AL445222-15|CAH72929.1| 165|Homo sapiens ribosomal protein L12 ... 207 1e-53
AL021366-3|CAA16156.1| 165|Homo sapiens cICK0721Q.2 (60S Riboso... 200 1e-51
BC059950-1|AAH59950.1| 132|Homo sapiens RPL12 protein protein. 76 2e-30
BX088650-2|CAM26293.1| 203|Homo sapiens kinesin family member C... 36 0.049
AL662799-3|CAM25565.1| 203|Homo sapiens kinesin family member C... 36 0.049
BX248088-14|CAM25707.1| 203|Homo sapiens kinesin family member ... 36 0.065
AB041941-1|BAD83595.1| 915|Homo sapiens G-protein coupled recep... 35 0.15
BC035013-1|AAH35013.1| 652|Homo sapiens RAB11 family interactin... 31 1.4
AF334812-1|AAK20892.1| 653|Homo sapiens Rab11 interacting prote... 31 1.8
AF153085-1|AAF34356.1| 549|Homo sapiens phosphoprotein pp75 pro... 31 1.8
AC010913-1|AAX88900.1| 522|Homo sapiens unknown protein. 31 1.8
AB020664-1|BAA74880.1| 733|Homo sapiens KIAA0857 protein protein. 31 1.8
AL133410-17|CAI10994.1| 702|Homo sapiens chromosome 9 open read... 30 3.2
BC014077-1|AAH14077.2| 724|Homo sapiens GRAM domain containing ... 30 4.3
AK074914-1|BAC11289.1| 713|Homo sapiens protein ( Homo sapiens ... 30 4.3
AB040966-1|BAA96057.1| 651|Homo sapiens KIAA1533 protein protein. 30 4.3
X85108-1|CAA59429.1| 1331|Homo sapiens alpha3b subunit of lamini... 29 9.8
X85107-1|CAA59428.1| 1238|Homo sapiens alpha3a subunit of lamini... 29 9.8
>AB209471-1|BAD92708.1| 197|Homo sapiens ribosomal protein L12
variant protein.
Length = 197
Score = 209 bits (511), Expect = 3e-54
Identities = 95/116 (81%), Positives = 108/116 (93%)
Frame = +1
Query: 100 STMPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKI 279
STMPPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DWKGL+I
Sbjct: 31 STMPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRI 90
Query: 280 TVQLIVQNRQAQISVVPSAAALIIRALKEPPRDRKKQKNIKHNGNITMEDVIGIAK 447
TV+L +QNRQAQI VVPSA+ALII+ALKEPPRDRKKQKNIKH+GNIT ++++ I +
Sbjct: 91 TVKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIVR 146
>L06505-1|AAA36157.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 207 bits (506), Expect = 1e-53
Identities = 94/114 (82%), Positives = 107/114 (93%)
Frame = +1
Query: 106 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITV 285
MPPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DWKGL+ITV
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 286 QLIVQNRQAQISVVPSAAALIIRALKEPPRDRKKQKNIKHNGNITMEDVIGIAK 447
+L +QNRQAQI VVPSA+ALII+ALKEPPRDRKKQKNIKH+GNIT ++++ IA+
Sbjct: 61 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIAR 114
>BC105603-1|AAI05604.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 207 bits (506), Expect = 1e-53
Identities = 94/114 (82%), Positives = 107/114 (93%)
Frame = +1
Query: 106 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITV 285
MPPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DWKGL+ITV
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 286 QLIVQNRQAQISVVPSAAALIIRALKEPPRDRKKQKNIKHNGNITMEDVIGIAK 447
+L +QNRQAQI VVPSA+ALII+ALKEPPRDRKKQKNIKH+GNIT ++++ IA+
Sbjct: 61 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIAR 114
>BC094831-1|AAH94831.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 207 bits (506), Expect = 1e-53
Identities = 94/114 (82%), Positives = 107/114 (93%)
Frame = +1
Query: 106 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITV 285
MPPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DWKGL+ITV
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 286 QLIVQNRQAQISVVPSAAALIIRALKEPPRDRKKQKNIKHNGNITMEDVIGIAK 447
+L +QNRQAQI VVPSA+ALII+ALKEPPRDRKKQKNIKH+GNIT ++++ IA+
Sbjct: 61 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIAR 114
>BC050644-1|AAH50644.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 207 bits (506), Expect = 1e-53
Identities = 94/114 (82%), Positives = 107/114 (93%)
Frame = +1
Query: 106 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITV 285
MPPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DWKGL+ITV
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 286 QLIVQNRQAQISVVPSAAALIIRALKEPPRDRKKQKNIKHNGNITMEDVIGIAK 447
+L +QNRQAQI VVPSA+ALII+ALKEPPRDRKKQKNIKH+GNIT ++++ IA+
Sbjct: 61 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIAR 114
>AL445222-15|CAH72929.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 207 bits (506), Expect = 1e-53
Identities = 94/114 (82%), Positives = 107/114 (93%)
Frame = +1
Query: 106 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITV 285
MPPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DWKGL+ITV
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 286 QLIVQNRQAQISVVPSAAALIIRALKEPPRDRKKQKNIKHNGNITMEDVIGIAK 447
+L +QNRQAQI VVPSA+ALII+ALKEPPRDRKKQKNIKH+GNIT ++++ IA+
Sbjct: 61 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIAR 114
>AL021366-3|CAA16156.1| 165|Homo sapiens cICK0721Q.2 (60S Ribosomal
Protein L12 LIKE protein) protein.
Length = 165
Score = 200 bits (489), Expect = 1e-51
Identities = 91/114 (79%), Positives = 105/114 (92%)
Frame = +1
Query: 106 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITV 285
MPPKFDPNEIK+V LRC GEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DWKGL+ITV
Sbjct: 1 MPPKFDPNEIKVVYLRCTRGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 286 QLIVQNRQAQISVVPSAAALIIRALKEPPRDRKKQKNIKHNGNITMEDVIGIAK 447
+L ++NRQAQI VVPSA+A II+ALK+PPRDRKKQKNIKHNGNIT ++++ IA+
Sbjct: 61 KLTIENRQAQIEVVPSASAPIIKALKKPPRDRKKQKNIKHNGNITFDEIVNIAR 114
>BC059950-1|AAH59950.1| 132|Homo sapiens RPL12 protein protein.
Length = 132
Score = 76.2 bits (179), Expect(2) = 2e-30
Identities = 33/44 (75%), Positives = 41/44 (93%)
Frame = +1
Query: 316 ISVVPSAAALIIRALKEPPRDRKKQKNIKHNGNITMEDVIGIAK 447
I VVPSA+ALII+ALKEPPRDRKKQKNIKH+GNIT ++++ IA+
Sbjct: 38 IEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIAR 81
Score = 75.8 bits (178), Expect(2) = 2e-30
Identities = 33/37 (89%), Positives = 35/37 (94%)
Frame = +1
Query: 106 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGL 216
MPPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGL
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGL 37
>BX088650-2|CAM26293.1| 203|Homo sapiens kinesin family member C1
protein.
Length = 203
Score = 36.3 bits (80), Expect = 0.049
Identities = 18/34 (52%), Positives = 20/34 (58%)
Frame = -2
Query: 268 PSSH*WL*RCHHQPFLGRDQGDRF*EPRRT*HRL 167
PSSH +CHHQPFL D G R P + HRL
Sbjct: 85 PSSHPLPWQCHHQPFLETDPGGRSWGPGQKWHRL 118
>AL662799-3|CAM25565.1| 203|Homo sapiens kinesin family member C1
protein.
Length = 203
Score = 36.3 bits (80), Expect = 0.049
Identities = 18/34 (52%), Positives = 20/34 (58%)
Frame = -2
Query: 268 PSSH*WL*RCHHQPFLGRDQGDRF*EPRRT*HRL 167
PSSH +CHHQPFL D G R P + HRL
Sbjct: 85 PSSHPLPWQCHHQPFLETDPGGRSWGPGQKWHRL 118
>BX248088-14|CAM25707.1| 203|Homo sapiens kinesin family member C1
protein.
Length = 203
Score = 35.9 bits (79), Expect = 0.065
Identities = 18/34 (52%), Positives = 20/34 (58%)
Frame = -2
Query: 268 PSSH*WL*RCHHQPFLGRDQGDRF*EPRRT*HRL 167
PSSH +CHHQPFL D G R P + HRL
Sbjct: 85 PSSHPLPWQCHHQPFLVTDPGGRSWGPGQKWHRL 118
>AB041941-1|BAD83595.1| 915|Homo sapiens G-protein coupled receptor
protein.
Length = 915
Score = 34.7 bits (76), Expect = 0.15
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = +1
Query: 241 IAKATSDWKGLKITVQLIVQNRQAQISVVPSAAALIIR--ALKEPPRDRKKQ-KNIKHNG 411
I++ DWKG+ +T Q QI ++ A+L IR L EP + RK K I
Sbjct: 429 ISRKFIDWKGIPVTQVQSTQGYNYQIEMIQQNASLPIRGHVLIEPDQFRKSHPKTIISMA 488
Query: 412 NITMEDVIGIAK 447
++T D++ I +
Sbjct: 489 SLTFGDILPITQ 500
>BC035013-1|AAH35013.1| 652|Homo sapiens RAB11 family interacting
protein 5 (class I) protein.
Length = 652
Score = 31.5 bits (68), Expect = 1.4
Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +1
Query: 166 EVGATSSLAPKIGP-LGLSPKKVGDDIAKATSDWKGLK 276
E+G SSL K GP LG SP KA S W GL+
Sbjct: 475 ELGRRSSLGEKGGPILGASPHHSSSGEGKAKSSWFGLR 512
>AF334812-1|AAK20892.1| 653|Homo sapiens Rab11 interacting protein
Rip11a protein.
Length = 653
Score = 31.1 bits (67), Expect = 1.8
Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +1
Query: 166 EVGATSSLAPKIGP-LGLSPKKVGDDIAKATSDWKGLK 276
E+G SSL K GP LG SP KA S W GL+
Sbjct: 476 ELGRRSSLGEKGGPILGASPHHSSSGEEKAKSSWFGLR 513
>AF153085-1|AAF34356.1| 549|Homo sapiens phosphoprotein pp75
protein.
Length = 549
Score = 31.1 bits (67), Expect = 1.8
Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +1
Query: 166 EVGATSSLAPKIGP-LGLSPKKVGDDIAKATSDWKGLK 276
E+G SSL K GP LG SP KA S W GL+
Sbjct: 372 ELGRRSSLGEKGGPILGASPHHSSSGEEKAKSSWFGLR 409
>AC010913-1|AAX88900.1| 522|Homo sapiens unknown protein.
Length = 522
Score = 31.1 bits (67), Expect = 1.8
Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +1
Query: 166 EVGATSSLAPKIGP-LGLSPKKVGDDIAKATSDWKGLK 276
E+G SSL K GP LG SP KA S W GL+
Sbjct: 476 ELGRRSSLGEKGGPILGASPHHSSSGEEKAKSSWFGLR 513
>AB020664-1|BAA74880.1| 733|Homo sapiens KIAA0857 protein protein.
Length = 733
Score = 31.1 bits (67), Expect = 1.8
Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +1
Query: 166 EVGATSSLAPKIGP-LGLSPKKVGDDIAKATSDWKGLK 276
E+G SSL K GP LG SP KA S W GL+
Sbjct: 556 ELGRRSSLGEKGGPILGASPHHSSSGEEKAKSSWFGLR 593
>AL133410-17|CAI10994.1| 702|Homo sapiens chromosome 9 open reading
frame 127 protein.
Length = 702
Score = 30.3 bits (65), Expect = 3.2
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = -1
Query: 221 GERPRGPILGAKEDVAPTSPPTHLKLTILISLGSNLGGIVLTNY--CNNKSL 72
GER RGP L + + PP L L + LG GG+ LT+Y C+ + L
Sbjct: 50 GERSRGPRLKSGFQL----PPALLLLLLFSVLGPGAGGLFLTDYSTCSPRKL 97
>BC014077-1|AAH14077.2| 724|Homo sapiens GRAM domain containing 1A
protein.
Length = 724
Score = 29.9 bits (64), Expect = 4.3
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Frame = +1
Query: 124 PNEIKIVNLRCVGGEVGATSSLAPKIGPLGL----SPKKVGDDIA 246
P E+ + +C G E+G TS + PL L +PK+VGD IA
Sbjct: 206 PRELWHLVHQCYGSELGLTSEDEDYVSPLQLNGLGTPKEVGDVIA 250
>AK074914-1|BAC11289.1| 713|Homo sapiens protein ( Homo sapiens
cDNA FLJ90433 fis, clone NT2RP3000721. ).
Length = 713
Score = 29.9 bits (64), Expect = 4.3
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Frame = +1
Query: 124 PNEIKIVNLRCVGGEVGATSSLAPKIGPLGL----SPKKVGDDIA 246
P E+ + +C G E+G TS + PL L +PK+VGD IA
Sbjct: 199 PRELWHLVHQCYGSELGLTSEDEDYVSPLQLNGLGTPKEVGDVIA 243
>AB040966-1|BAA96057.1| 651|Homo sapiens KIAA1533 protein protein.
Length = 651
Score = 29.9 bits (64), Expect = 4.3
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Frame = +1
Query: 124 PNEIKIVNLRCVGGEVGATSSLAPKIGPLGL----SPKKVGDDIA 246
P E+ + +C G E+G TS + PL L +PK+VGD IA
Sbjct: 136 PRELWHLVHQCYGSELGLTSEDEDYVSPLQLNGLGTPKEVGDVIA 180
>X85108-1|CAA59429.1| 1331|Homo sapiens alpha3b subunit of laminin 5
protein.
Length = 1331
Score = 28.7 bits (61), Expect = 9.8
Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = -1
Query: 161 PTHLKLTILISLGSNLGGIVLTNYCNNK-SLYNNSKPMNLDIKGVQPSKRTK 9
P KL +S G I L + N SLYN K NL+ VQP +R K
Sbjct: 1017 PPDFKLPSRLSFPPYKGCIELDDLNENVLSLYNFKKTFNLNTTEVQPCRRRK 1068
>X85107-1|CAA59428.1| 1238|Homo sapiens alpha3a subunit of laminin 5
protein.
Length = 1238
Score = 28.7 bits (61), Expect = 9.8
Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = -1
Query: 161 PTHLKLTILISLGSNLGGIVLTNYCNNK-SLYNNSKPMNLDIKGVQPSKRTK 9
P KL +S G I L + N SLYN K NL+ VQP +R K
Sbjct: 924 PPDFKLPSRLSFPPYKGCIELDDLNENVLSLYNFKKTFNLNTTEVQPCRRRK 975
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,558,555
Number of Sequences: 237096
Number of extensions: 1228168
Number of successful extensions: 6888
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 6624
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6888
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3758237868
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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