Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_E06
(509 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 38 7e-04
SPAC12G12.07c |||conserved fungal protein|Schizosaccharomyces po... 31 0.13
SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces pomb... 29 0.31
SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces p... 28 0.71
SPAC24C9.03 |mvd1||diphosphomevalonate decarboxylase |Schizosacc... 28 0.93
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 28 0.93
SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78 |Schizosacch... 28 0.93
SPAC19A8.05c |vps27|sst4|sorting receptor for ubiquitinated memb... 27 1.2
SPBC365.20c ||SPBC557.06c|nicotinamidase |Schizosaccharomyces po... 27 1.2
SPBC1734.04 ||SPBC337.20|mannosyltransferase complex subunit, An... 27 1.6
SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3 ... 27 2.2
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 27 2.2
SPCC16A11.13 |usp106|luc7|U1 snRNP-associated protein Usp106|Sch... 26 2.9
SPBC2F12.05c |||sterol binding ankyrin repeat protein|Schizosacc... 26 3.8
SPBC839.10 |usp107|snu71|U1 snRNP-associated protein Usp107|Schi... 26 3.8
SPAC26H5.12 |rpo41||mitochondrial DNA-directed RNA polymerase|Sc... 26 3.8
SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces pombe... 25 5.0
SPCC1393.05 |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 25 5.0
SPAC11E3.08c |nse6||Smc5-6 complex non-SMC subunit Nse6|Schizosa... 25 6.6
SPAC19B12.02c |||1,3-beta-glucanosyltransferase|Schizosaccharomy... 25 6.6
SPCC1450.16c |||triacylglycerol lipase|Schizosaccharomyces pombe... 25 6.6
SPAC1565.07c |||TATA binding protein interacting protein |Schizo... 25 6.6
SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces po... 25 6.6
SPBC28F2.11 |||INO80 complex subunit |Schizosaccharomyces pombe|... 25 6.6
SPBC646.09c |int6|yin6|translation initiation factor eIF3e|Schiz... 25 6.6
SPAC1D4.09c |||DUF602 family protein|Schizosaccharomyces pombe|c... 25 6.6
SPBC19G7.04 |||HMG box protein |Schizosaccharomyces pombe|chr 2|... 25 8.7
SPCC330.09 |||rRNA processing protein Enp2 |Schizosaccharomyces ... 25 8.7
SPAC25G10.01 ||SPAC2C4.18|RNA-binding protein|Schizosaccharomyce... 25 8.7
SPAPB1A10.15 |||Arv1-like family protein|Schizosaccharomyces pom... 25 8.7
SPBC8D2.14c |sed5||SNARE Sed5 |Schizosaccharomyces pombe|chr 2||... 25 8.7
SPAC2E12.02 |hsf1|hstf, hsf|transcription factor Hsf1|Schizosacc... 25 8.7
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 25 8.7
SPAC9G1.06c |cyk3||cytokinesis protein Cyk3|Schizosaccharomyces ... 25 8.7
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 38.3 bits (85), Expect = 7e-04
Identities = 33/108 (30%), Positives = 54/108 (50%), Gaps = 2/108 (1%)
Frame = +2
Query: 170 KHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAK 349
K +DF+K I + A +NS + E LKE S + ++ EL+N L+ + + K
Sbjct: 455 KKIKDFEK-IEQDLRACLNSSSNE-----LKEKSALIDKKDQELNN-LREQIKEQK-KVS 506
Query: 350 EVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTR--HPEHTKGE 487
E Q + Q+L+R + + +K H E Q L +LQT + EH +
Sbjct: 507 ESTQSSLQSLQRDILNEKKKHEVYESQLNELKGELQTEISNSEHLSSQ 554
Score = 30.7 bits (66), Expect = 0.13
Identities = 28/106 (26%), Positives = 52/106 (49%)
Frame = +2
Query: 161 DLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANG 340
DLEK +D +K + ++ TE+++ +L+EG + ++++ELS+ L+ A
Sbjct: 1341 DLEKALKDSEKNFLRK-----EAEMTENIH-SLEEGKEETKKEIAELSSRLEDNQL-ATN 1393
Query: 341 KAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTRHPEHT 478
K K L Q + R ED+ K + E +L E L + + +
Sbjct: 1394 KLKNQLDHLNQEI-RLKEDVLK---EKESLIISLEESLSNQRQKES 1435
>SPAC12G12.07c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 412
Score = 30.7 bits (66), Expect = 0.13
Identities = 31/132 (23%), Positives = 53/132 (40%), Gaps = 18/132 (13%)
Frame = +2
Query: 122 AMVRRDAPNTILQDLEKHAQDFQKTI------SEQFNAIVNSKNTESLNKALKEGSDSMV 283
A+ +DA T L +L++ T QF A N+K E + +EG D+
Sbjct: 65 ALQGKDAVLTTLNELKELLSQIDATRIRDEKHKRQFEATENAKRKEEIEAQYREGYDTAQ 124
Query: 284 QQVSELSNSLQGA------------LTDANGKAKEVLQQARQNLERTVEDLRKAHPDVEK 427
+QVS L L+ A A K ++ + + E+ V DL + DV
Sbjct: 125 KQVSSLVRFLRFASHNCVHPSDDAPFNSAVEKLLVIVYEGTEKSEKAVADLNDSSTDVVP 184
Query: 428 QATALHEKLQTR 463
++ + + +R
Sbjct: 185 ESEVSFQTISSR 196
>SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 175
Score = 29.5 bits (63), Expect = 0.31
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = +2
Query: 356 LQQARQNLERTVEDLRKAHPDVEK 427
++QAR E T+ED+++A P++EK
Sbjct: 126 IEQARPTEEITIEDMKQAVPEIEK 149
>SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 521
Score = 28.3 bits (60), Expect = 0.71
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +2
Query: 182 DFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTD-ANGKAKEVL 358
D T Q + I+ ++ +ES + A SM + S+S A NG+AKE
Sbjct: 426 DLNDTTKNQNDQILPNETSESDDDA--NSISSMENEEERTSDSKSSAKQGKGNGRAKETP 483
Query: 359 QQARQNLERTVED 397
++ R ++T ED
Sbjct: 484 EEKRARKKKTKED 496
>SPAC24C9.03 |mvd1||diphosphomevalonate decarboxylase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 393
Score = 27.9 bits (59), Expect = 0.93
Identities = 19/70 (27%), Positives = 32/70 (45%)
Frame = +2
Query: 221 VNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDL 400
+N S++ L + D + S + NG A+E+ A + L VE+L
Sbjct: 29 LNLPTNSSISVTLSQ-DDLRTVTTASCSEKFENDTLWLNGNAEEIF--ANKRLRVCVEEL 85
Query: 401 RKAHPDVEKQ 430
RKA D+E++
Sbjct: 86 RKARLDLEEE 95
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 27.9 bits (59), Expect = 0.93
Identities = 19/86 (22%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Frame = +2
Query: 236 TESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQN----LERTVEDLR 403
TE+ + L + + ++ +++++L N+ Q + + K + + LE+T+EDL+
Sbjct: 875 TETKHDILAQRNRNVSEKMNDLENAAQKFFSSPDRKNGYLYPSEHTSKIEYLEKTIEDLK 934
Query: 404 KAHPDVEKQATALHEKLQTRHPEHTK 481
A D K L + + + + + TK
Sbjct: 935 LALQDELKNRNLLMDDISSYNKQTTK 960
>SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 27.9 bits (59), Expect = 0.93
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Frame = +2
Query: 230 KNTESLNKALKEGSDSMVQQVSELSNSLQGA------LTDANGKAKEVLQQARQNLERT 388
K T++ + +E +S + + E + L A L D+ KAK L+QAR LERT
Sbjct: 364 KETDTTSVERREKLESKLTDLKEEQDKLSAAWEEERKLLDSIKKAKTELEQARIELERT 422
>SPAC19A8.05c |vps27|sst4|sorting receptor for ubiquitinated
membrane proteins, ESCRT 0 complex|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 610
Score = 27.5 bits (58), Expect = 1.2
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -3
Query: 375 FWRACWSTSLALPFASVNAPCRLLDNSETCCTMESEPSFS 256
F C S +L+LP +N P R+ D +C ++ ++P S
Sbjct: 199 FCNQCSSKTLSLPHLGINQPVRVCD---SCYSLRTKPKGS 235
>SPBC365.20c ||SPBC557.06c|nicotinamidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 220
Score = 27.5 bits (58), Expect = 1.2
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = +2
Query: 140 APNTILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQ 316
A + +++ HA+ + T + V +TES N+A+K+ D+ ++ +SE LQ
Sbjct: 159 ATDICVKETALHARHWYNTYI--ISEAVKGSSTESHNQAIKDFRDAKIEVISEKDPILQ 215
>SPBC1734.04 ||SPBC337.20|mannosyltransferase complex subunit, Anp
family |Schizosaccharomyces pombe|chr 2|||Manual
Length = 430
Score = 27.1 bits (57), Expect = 1.6
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 5/41 (12%)
Frame = +2
Query: 77 AKCFVLFACVALAHGAMVRRD-----APNTILQDLEKHAQD 184
A+ ++L A + H + RD APNTIL+DL +H +D
Sbjct: 201 ARNWLLSAAIQPYHSWVYWRDVDVETAPNTILEDLMRHDKD 241
>SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 932
Score = 26.6 bits (56), Expect = 2.2
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = +2
Query: 197 ISEQFN-AIVNSKNTESLNKALKEGSDSMVQQVSELSNS--LQGALTDANGKAKEVLQQA 367
I +Q N +I N KNT N + K + + +S +SNS A+ + +AKE + A
Sbjct: 483 IPQQSNKSIGNHKNTSVANVSSKVANSKFERNISMMSNSNASSPAIFEVGAEAKEKTKDA 542
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 26.6 bits (56), Expect = 2.2
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = +2
Query: 278 MVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQ 457
+VQ+ S L + L +D + K E L+ + R V+DL K + +Q T L+EK+Q
Sbjct: 194 LVQEKSALVSDLASLQSD-HSKVCEKLEVS----SRQVQDLEKKLAGLAQQNTELNEKIQ 248
Score = 26.2 bits (55), Expect = 2.9
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Frame = +2
Query: 257 LKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQA---RQNLERTVEDLRKAHPDVEK 427
+ + S++ V + E + L L+ K+ L++ +Q L EDLRK D EK
Sbjct: 1005 ITKDSETRVALLLEENKHLNNELSSHRNAEKQHLEKENDYKQQLLLVTEDLRKTREDYEK 1064
Query: 428 Q 430
+
Sbjct: 1065 E 1065
>SPCC16A11.13 |usp106|luc7|U1 snRNP-associated protein
Usp106|Schizosaccharomyces pombe|chr 3|||Manual
Length = 264
Score = 26.2 bits (55), Expect = 2.9
Identities = 27/111 (24%), Positives = 52/111 (46%), Gaps = 10/111 (9%)
Frame = +2
Query: 155 LQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALT-- 328
L+DLE+H D K I I ++ ++ K +E D +++ + +S++ +T
Sbjct: 85 LEDLERHVDDCNKRID-----IAEARREKT--KEEEERIDELMRDIIHTDHSIEVIITEM 137
Query: 329 DANGKAKEVLQQARQNLE-RTVEDLRK-------AHPDVEKQATALHEKLQ 457
+A K K V + +E ++ RK + ++ QA+ H+KLQ
Sbjct: 138 EALAKRKLVNDAVKHFIELNRLKTYRKELYDEVISMNEIPSQASTTHQKLQ 188
>SPBC2F12.05c |||sterol binding ankyrin repeat
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1310
Score = 25.8 bits (54), Expect = 3.8
Identities = 22/73 (30%), Positives = 29/73 (39%)
Frame = +1
Query: 217 NRQLKEHGELEQSTEGRLRLHGAAGLRVIQQSTGCVDRRKR*S*GSAPTSSPELGAHSRG 396
N KE +Q TEG+ H QQ+T RK S P+ P G H+R
Sbjct: 673 NHHRKESIPSKQPTEGQ---HARQESLPSQQTTETKHLRKE----STPSKQPTEGQHTRQ 725
Query: 397 SPQGAPRRRETSH 435
+ + ET H
Sbjct: 726 ESLPSQQTTETKH 738
>SPBC839.10 |usp107|snu71|U1 snRNP-associated protein
Usp107|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 25.8 bits (54), Expect = 3.8
Identities = 24/94 (25%), Positives = 43/94 (45%), Gaps = 10/94 (10%)
Frame = +2
Query: 200 SEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTD------ANGKAKEV-- 355
+EQF+ + + N + + G + + ++++ N +G + A K KE+
Sbjct: 189 NEQFSRALEALNDFVVPPLYEGGPSTRLSLITDVEN--EGLYREWQTSRYARNKQKEINI 246
Query: 356 LQQARQNLERTVEDLRK--AHPDVEKQATALHEK 451
LQQ R NLER +D+ +E+ A EK
Sbjct: 247 LQQIRFNLERICQDIGNFDVRSRIERAARQAREK 280
>SPAC26H5.12 |rpo41||mitochondrial DNA-directed RNA
polymerase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1120
Score = 25.8 bits (54), Expect = 3.8
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +2
Query: 323 LTDANGKAKEVLQQARQN 376
LTD AKE+LQQAR N
Sbjct: 83 LTDVLSNAKELLQQARLN 100
>SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 516
Score = 25.4 bits (53), Expect = 5.0
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +2
Query: 335 NGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQT 460
N +K L+ AR +L+ ++ED KA+ + E+ LQT
Sbjct: 33 NQLSKLKLEDARADLQSSMEDSNKANGNGEETTDGAEGVLQT 74
>SPCC1393.05 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 956
Score = 25.4 bits (53), Expect = 5.0
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +2
Query: 146 NTILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSL 313
NT+ + + K +Q FQ S +FN + N ++K+L++ + S+ N L
Sbjct: 487 NTVDEAITKQSQTFQLVNSNEFNEV----NANDVHKSLRQNCAKLDFDDSKSKNLL 538
>SPAC11E3.08c |nse6||Smc5-6 complex non-SMC subunit
Nse6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 522
Score = 25.0 bits (52), Expect = 6.6
Identities = 22/86 (25%), Positives = 35/86 (40%)
Frame = +2
Query: 149 TILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALT 328
TIL L + Q F+K I+ SKN +S +L + D + + +L +
Sbjct: 343 TILSSLSRSCQKFRKKIAFTLFVGKQSKNDDSDFSSLCQRLDEISASCNNDYTTLLYQIR 402
Query: 329 DANGKAKEVLQQARQNLERTVEDLRK 406
E + + LE +E LRK
Sbjct: 403 TFGYAVDEKHFKTNERLECLLEKLRK 428
>SPAC19B12.02c |||1,3-beta-glucanosyltransferase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 542
Score = 25.0 bits (52), Expect = 6.6
Identities = 12/52 (23%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = -3
Query: 396 SSTVRSKFWRACWSTSLALPFASVNAPCRLLDNSETCCTME--SEPSFSALF 247
++T+ + + W + +LP A C +D++ +C + S +S LF
Sbjct: 340 TATMSCQATNSAWMAATSLPPTPSEAVCECMDSTRSCVINDDVSSDDYSDLF 391
>SPCC1450.16c |||triacylglycerol lipase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 513
Score = 25.0 bits (52), Expect = 6.6
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -3
Query: 504 PSPGSGSPLVCSGWRVCSFSCNAVACFSTSGCALRRSSTVRSK 376
PS SGSP V + + + + C S S A+ RSS + +K
Sbjct: 300 PSAVSGSPQVLNYFTAPNVLIWSAVCSSNSWAAIYRSSPLLAK 342
>SPAC1565.07c |||TATA binding protein interacting protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1220
Score = 25.0 bits (52), Expect = 6.6
Identities = 20/76 (26%), Positives = 37/76 (48%)
Frame = +2
Query: 245 LNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVE 424
L K E SD ++ ++ LS+ L L DAN L+ L+ ++ L A P+V+
Sbjct: 6 LLKKYVESSDKDIRYMA-LSD-LAARLNDANHLKNLKLESFPDTLDVLLQALSDASPEVQ 63
Query: 425 KQATALHEKLQTRHPE 472
++A + ++ P+
Sbjct: 64 QEAVRCVAIISSKIPQ 79
>SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 851
Score = 25.0 bits (52), Expect = 6.6
Identities = 16/58 (27%), Positives = 22/58 (37%), Gaps = 1/58 (1%)
Frame = +2
Query: 107 ALAHGAM-VRRDAPNTILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDS 277
+L GA V ++ I K DF K I FN + L A+ E S +
Sbjct: 46 SLTDGAKSVAKERQKKISDPARKFFSDFSKLIDNSFNVFAKKNEGDLLQNAIYELSQA 103
>SPBC28F2.11 |||INO80 complex subunit |Schizosaccharomyces pombe|chr
2|||Manual
Length = 310
Score = 25.0 bits (52), Expect = 6.6
Identities = 14/55 (25%), Positives = 29/55 (52%)
Frame = +2
Query: 251 KALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHP 415
+ ++E S++ + SE+S + A+TD + KE+ A ++ + +KA P
Sbjct: 30 REIEESLPSILGEKSEVSKPFKPAVTDPSNAKKEI-NMAIESPSKKATSPKKATP 83
>SPBC646.09c |int6|yin6|translation initiation factor
eIF3e|Schizosaccharomyces pombe|chr 2|||Manual
Length = 501
Score = 25.0 bits (52), Expect = 6.6
Identities = 16/76 (21%), Positives = 38/76 (50%)
Frame = +2
Query: 239 ESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPD 418
E + A E S++Q++SEL +QG L +++ RQ+ + ++ L++ +
Sbjct: 79 EDMANAFAEKRRSVLQELSELEEEVQGILGVLEN--PDLIAALRQDKGQNLQHLQEHYNI 136
Query: 419 VEKQATALHEKLQTRH 466
++ L++ Q ++
Sbjct: 137 TPERIAVLYKFAQFQY 152
>SPAC1D4.09c |||DUF602 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 240
Score = 25.0 bits (52), Expect = 6.6
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +2
Query: 191 KTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNS 310
KT+S++ + S+ T SLNKA K+ + + ++ +S S
Sbjct: 164 KTLSKRLLDLALSEKTHSLNKASKKSNKNGDKKRKHVSKS 203
>SPBC19G7.04 |||HMG box protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 362
Score = 24.6 bits (51), Expect = 8.7
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = -3
Query: 234 FFELTIALNCSLIVFWKSWACFSRSCNIVLGASRRTIAP 118
+ E+T N + +K W C + CN + G ++I P
Sbjct: 247 YIEITSKHNYDIDFKYK-WLCINEKCNKLYGRHSKSINP 284
>SPCC330.09 |||rRNA processing protein Enp2 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 634
Score = 24.6 bits (51), Expect = 8.7
Identities = 19/107 (17%), Positives = 39/107 (36%), Gaps = 1/107 (0%)
Frame = +2
Query: 167 EKHAQDFQKT-ISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGK 343
E+H Q K + +Q + + S+N +N L ++ + + G + +
Sbjct: 434 EEHRQKIVKERLEKQRASKIRSQNRPKVNAGLASRLSYQENKLRKKTGVTDGPSILEDER 493
Query: 344 AKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTRHPEHTKG 484
K V ++ + ++ HP + + EHTKG
Sbjct: 494 FKNVFTDKEFEVDEDTLEYKQLHPSRSEARGLTAAEESEEEKEHTKG 540
>SPAC25G10.01 ||SPAC2C4.18|RNA-binding protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 297
Score = 24.6 bits (51), Expect = 8.7
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +1
Query: 34 NFASNSHRLRHRHGRQVLRVVRLRCPRSRSDGP 132
N S R RH HGR P R+D P
Sbjct: 248 NVDSRPRRERHFHGRSFAHAEHHSVPNMRNDTP 280
>SPAPB1A10.15 |||Arv1-like family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 220
Score = 24.6 bits (51), Expect = 8.7
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = -3
Query: 231 FELTIALNCSLIVFWKSWACFSRSCNIVLGASRRTI 124
+++++ L L + WKSW S S ++L +S R +
Sbjct: 139 YQISVVLLLCLTMGWKSWT--SASGAVILSSSTRML 172
>SPBC8D2.14c |sed5||SNARE Sed5 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 24.6 bits (51), Expect = 8.7
Identities = 23/119 (19%), Positives = 46/119 (38%), Gaps = 3/119 (2%)
Frame = +2
Query: 149 TILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSN---SLQG 319
T+ D Q+ I + +++ + + SL + +K + Q N SLQ
Sbjct: 72 TLFDDRPVEIQELTFQIKQSLSSL--NSDIASLQQVVKGNRNKPAQMNQHSENVVVSLQN 129
Query: 320 ALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTRHPEHTKGEPEP 496
+L + + K++L+ QN++ + K A L + P +P+P
Sbjct: 130 SLANTSMTFKDILEIRTQNMKASQNRTEKFVASSSMNANPLINSGNSISPFADYNDPKP 188
>SPAC2E12.02 |hsf1|hstf, hsf|transcription factor
Hsf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 609
Score = 24.6 bits (51), Expect = 8.7
Identities = 13/19 (68%), Positives = 13/19 (68%), Gaps = 2/19 (10%)
Frame = +1
Query: 358 PTSSP--ELGAHSRGSPQG 408
PT SP E AHSR SPQG
Sbjct: 255 PTVSPTNEPSAHSRPSPQG 273
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 24.6 bits (51), Expect = 8.7
Identities = 19/56 (33%), Positives = 26/56 (46%)
Frame = +2
Query: 239 ESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRK 406
ES N+ DSM ++ ELSN L+ AN K E R+ + DLR+
Sbjct: 824 ESSNQEYTATVDSMNSRILELSNDLR----VANSKLSECSDDVRRLTLQNSFDLRE 875
>SPAC9G1.06c |cyk3||cytokinesis protein Cyk3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 886
Score = 24.6 bits (51), Expect = 8.7
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 3/90 (3%)
Frame = +2
Query: 122 AMVRRDAPNTILQDLEKHAQDFQKTISEQFNA--IVNSKNTESLNKALKEGSDSMVQQVS 295
+M R A + +K + D T S+Q +V S N +LNK +E SDS+ Q S
Sbjct: 75 SMSRTSASSFRYSSPQKSSIDTPITSSDQGLTPDLVGSSN--ALNKPTRE-SDSLKHQKS 131
Query: 296 E-LSNSLQGALTDANGKAKEVLQQARQNLE 382
+ NSL +L+ ++ +R NL+
Sbjct: 132 HPMLNSLGSSLSLKKSVSRPPSSMSRTNLD 161
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,930,242
Number of Sequences: 5004
Number of extensions: 34507
Number of successful extensions: 224
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 208
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 223
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 204242806
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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