Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_E06
(509 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical pr... 35 0.039
U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical pr... 35 0.039
AF024502-4|AAB70374.1| 675|Caenorhabditis elegans Hypothetical ... 34 0.069
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 33 0.091
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 33 0.091
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 33 0.091
Z54238-8|CAA90998.3| 459|Caenorhabditis elegans Hypothetical pr... 32 0.21
Z78200-10|CAN86608.1| 1312|Caenorhabditis elegans Hypothetical p... 32 0.28
Z78200-9|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical pr... 32 0.28
Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue... 32 0.28
U23168-3|AAU87831.1| 4034|Caenorhabditis elegans Temporarily ass... 31 0.49
U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily ass... 31 0.49
U41038-5|AAK29710.4| 519|Caenorhabditis elegans Hypothetical pr... 30 0.85
U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos... 30 1.1
AF040657-1|AAB95054.1| 758|Caenorhabditis elegans Hypothetical ... 30 1.1
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 1.1
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 1.1
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 1.1
AC025716-3|AAK39618.1| 690|Caenorhabditis elegans Hypothetical ... 30 1.1
Z83113-10|CAI46598.1| 556|Caenorhabditis elegans Hypothetical p... 29 1.5
Z83113-9|CAB05548.2| 497|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z73975-5|CAA98278.2| 556|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z73975-4|CAA98279.2| 497|Caenorhabditis elegans Hypothetical pr... 29 1.5
AC024810-9|AAF60766.1| 547|Caenorhabditis elegans Hypothetical ... 29 2.6
Z81560-8|CAN86623.1| 173|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z81560-7|CAB76737.2| 188|Caenorhabditis elegans Hypothetical pr... 28 3.4
U58753-1|AAC24437.2| 814|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z92777-6|CAE17682.1| 353|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z83120-1|CAB05583.1| 837|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z81096-8|CAD54149.2| 922|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z78065-11|CAD54155.2| 922|Caenorhabditis elegans Hypothetical p... 28 4.5
Z48055-11|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical p... 28 4.5
Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical p... 28 4.5
U80815-6|AAO91675.1| 464|Caenorhabditis elegans Hypothetical pr... 28 4.5
U80815-5|AAO91676.1| 439|Caenorhabditis elegans Hypothetical pr... 28 4.5
U80815-4|AAO91674.1| 524|Caenorhabditis elegans Hypothetical pr... 28 4.5
U80815-3|AAK73899.1| 499|Caenorhabditis elegans Hypothetical pr... 28 4.5
U40427-1|AAA81467.2| 798|Caenorhabditis elegans Hypothetical pr... 28 4.5
AC024774-2|AAM43790.1| 249|Caenorhabditis elegans Ubiquitin c-t... 28 4.5
Z81077-12|CAH19097.1| 316|Caenorhabditis elegans Hypothetical p... 27 6.0
Z68159-8|CAD01080.1| 310|Caenorhabditis elegans Hypothetical pr... 27 6.0
U97002-4|AAB52267.1| 630|Caenorhabditis elegans Hypothetical pr... 27 6.0
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 27 6.0
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 27 6.0
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 27 6.0
U14635-5|AAN63442.1| 464|Caenorhabditis elegans Hypothetical pr... 27 6.0
U14635-4|AAL02446.1| 459|Caenorhabditis elegans Hypothetical pr... 27 6.0
U14635-3|AAN63441.1| 491|Caenorhabditis elegans Hypothetical pr... 27 6.0
U14635-2|AAC46656.2| 522|Caenorhabditis elegans Hypothetical pr... 27 6.0
AC024781-3|AAK39330.2| 2203|Caenorhabditis elegans Prion-like-(q... 27 6.0
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 27 7.9
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 27 7.9
>U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical
protein C18C4.5b protein.
Length = 1046
Score = 34.7 bits (76), Expect = 0.039
Identities = 22/98 (22%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Frame = +2
Query: 155 LQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDA 334
++DL+K F + ++ + I K+ S+N ++ DS+ +++SE+ +L+
Sbjct: 153 VEDLQKQVSSFMSQMQDKNSEIQKMKDAISVNDVSRQNMDSLSEKLSEMDRTLREEQQQK 212
Query: 335 N--GKAKEVLQQARQNLERTVEDLRKAHPDVEKQATAL 442
+ E L+ A E T+ L+ E+ A L
Sbjct: 213 SQLRSQTETLKNALSTSESTLSMLKDKLAQFEQNALDL 250
>U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical
protein C18C4.5a protein.
Length = 1022
Score = 34.7 bits (76), Expect = 0.039
Identities = 22/98 (22%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Frame = +2
Query: 155 LQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDA 334
++DL+K F + ++ + I K+ S+N ++ DS+ +++SE+ +L+
Sbjct: 153 VEDLQKQVSSFMSQMQDKNSEIQKMKDAISVNDVSRQNMDSLSEKLSEMDRTLREEQQQK 212
Query: 335 N--GKAKEVLQQARQNLERTVEDLRKAHPDVEKQATAL 442
+ E L+ A E T+ L+ E+ A L
Sbjct: 213 SQLRSQTETLKNALSTSESTLSMLKDKLAQFEQNALDL 250
>AF024502-4|AAB70374.1| 675|Caenorhabditis elegans Hypothetical
protein M151.2 protein.
Length = 675
Score = 33.9 bits (74), Expect = 0.069
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Frame = +2
Query: 155 LQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQ---VSELSNSLQGAL 325
L++LE +A+ + + EQ N +K + L K+LK + + V+EL LQ
Sbjct: 111 LKELENNAEALKTQLQEQTNDAKKAK--DELQKSLKSAAARATEATTAVAELQAKLQTVE 168
Query: 326 TDANGK---AKEVLQQARQNLERTVEDLRKAHPDVEK 427
+ + AKE L +QN ER +L+K ++++
Sbjct: 169 KEHKKEIEDAKEALAAEKQNSEREKMELKKLTEELQR 205
Score = 27.5 bits (58), Expect = 6.0
Identities = 17/81 (20%), Positives = 35/81 (43%)
Frame = +2
Query: 239 ESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPD 418
E + K ++G ++ EL N+ + T + + ++A+ L+++++ +
Sbjct: 95 EQIEKLAEQGRKKD-DKLKELENNAEALKTQLQEQTNDA-KKAKDELQKSLKSAAARATE 152
Query: 419 VEKQATALHEKLQTRHPEHTK 481
L KLQT EH K
Sbjct: 153 ATTAVAELQAKLQTVEKEHKK 173
>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 33.5 bits (73), Expect = 0.091
Identities = 32/120 (26%), Positives = 51/120 (42%), Gaps = 13/120 (10%)
Frame = +2
Query: 116 HGAMVRRDAPNTILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVS 295
H R + ++ L++ +D Q ISE + N + + S KA + SD + +++
Sbjct: 1097 HSVSSRLEDEQALVSKLQRQIKDGQSRISELEEELENERQSRS--KADRAKSD-LQRELE 1153
Query: 296 ELSNSL--QGALTDAN-----------GKAKEVLQQARQNLERTVEDLRKAHPDVEKQAT 436
EL L QG T A K + L++A N E + LRK H D + T
Sbjct: 1154 ELGEKLDEQGGATAAQVEVNKKREAELAKLRRDLEEANMNHENQLGGLRKKHTDAVAELT 1213
>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical protein
F11C3.3 protein.
Length = 1963
Score = 33.5 bits (73), Expect = 0.091
Identities = 32/120 (26%), Positives = 51/120 (42%), Gaps = 13/120 (10%)
Frame = +2
Query: 116 HGAMVRRDAPNTILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVS 295
H R + ++ L++ +D Q ISE + N + + S KA + SD + +++
Sbjct: 1097 HSVSSRLEDEQALVSKLQRQIKDGQSRISELEEELENERQSRS--KADRAKSD-LQRELE 1153
Query: 296 ELSNSL--QGALTDAN-----------GKAKEVLQQARQNLERTVEDLRKAHPDVEKQAT 436
EL L QG T A K + L++A N E + LRK H D + T
Sbjct: 1154 ELGEKLDEQGGATAAQVEVNKKREAELAKLRRDLEEANMNHENQLGGLRKKHTDAVAELT 1213
>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
protein.
Length = 1966
Score = 33.5 bits (73), Expect = 0.091
Identities = 32/120 (26%), Positives = 51/120 (42%), Gaps = 13/120 (10%)
Frame = +2
Query: 116 HGAMVRRDAPNTILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVS 295
H R + ++ L++ +D Q ISE + N + + S KA + SD + +++
Sbjct: 1100 HSVSSRLEDEQALVSKLQRQIKDGQSRISELEEELENERQSRS--KADRAKSD-LQRELE 1156
Query: 296 ELSNSL--QGALTDAN-----------GKAKEVLQQARQNLERTVEDLRKAHPDVEKQAT 436
EL L QG T A K + L++A N E + LRK H D + T
Sbjct: 1157 ELGEKLDEQGGATAAQVEVNKKREAELAKLRRDLEEANMNHENQLGGLRKKHTDAVAELT 1216
>Z54238-8|CAA90998.3| 459|Caenorhabditis elegans Hypothetical
protein T28C6.7 protein.
Length = 459
Score = 32.3 bits (70), Expect = 0.21
Identities = 21/88 (23%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Frame = +2
Query: 149 TILQDLEKHAQDFQKTISEQFNAIVNSKNTE-SLNKALKEGSDSMVQQVSELSNSLQGAL 325
T L+D+ +D + + E+ + + +S+N E N L++ + ++V +L+ L +
Sbjct: 268 TTLEDINGKYEDERDRLQEEVDTLRSSRNWEIEQNALLRDQVAHLKEKVHKLTTELDASE 327
Query: 326 TDANGKAKEVLQQARQNLERTVEDLRKA 409
+ EV ++++ +E VEDL +A
Sbjct: 328 VAKRSLSSEV-DESKKLMELMVEDLLQA 354
>Z78200-10|CAN86608.1| 1312|Caenorhabditis elegans Hypothetical
protein T04H1.4b protein.
Length = 1312
Score = 31.9 bits (69), Expect = 0.28
Identities = 36/145 (24%), Positives = 67/145 (46%), Gaps = 2/145 (1%)
Frame = +2
Query: 5 AGIRHEADLATSLRTRTDSDTA--MAAKCFVLFACVALAHGAMVRRDAPNTILQDLEKHA 178
A I E D A +L+ R SD A +A C L + + A A + + LQ+ EK
Sbjct: 395 ADIDIEIDNAITLKIRGMSDKARMIAKNCAELQSNLRTAQEAATKIEVEMKTLQN-EK-- 451
Query: 179 QDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVL 358
+K + + I +N + K L + +++ + +++L + ALT+ K ++ L
Sbjct: 452 VKLEKEVEQLKFKIKQGQNATAGMKDLLKKEEALRKSLADLPLLDENALTECKLKREKYL 511
Query: 359 QQARQNLERTVEDLRKAHPDVEKQA 433
+Q ++ E + A D EK++
Sbjct: 512 KQLDILKKKCAEAEKNAEKDREKES 536
>Z78200-9|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical
protein T04H1.4a protein.
Length = 1298
Score = 31.9 bits (69), Expect = 0.28
Identities = 36/145 (24%), Positives = 67/145 (46%), Gaps = 2/145 (1%)
Frame = +2
Query: 5 AGIRHEADLATSLRTRTDSDTA--MAAKCFVLFACVALAHGAMVRRDAPNTILQDLEKHA 178
A I E D A +L+ R SD A +A C L + + A A + + LQ+ EK
Sbjct: 381 ADIDIEIDNAITLKIRGMSDKARMIAKNCAELQSNLRTAQEAATKIEVEMKTLQN-EK-- 437
Query: 179 QDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVL 358
+K + + I +N + K L + +++ + +++L + ALT+ K ++ L
Sbjct: 438 VKLEKEVEQLKFKIKQGQNATAGMKDLLKKEEALRKSLADLPLLDENALTECKLKREKYL 497
Query: 359 QQARQNLERTVEDLRKAHPDVEKQA 433
+Q ++ E + A D EK++
Sbjct: 498 KQLDILKKKCAEAEKNAEKDREKES 522
>Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue
ceRAD50 protein.
Length = 1298
Score = 31.9 bits (69), Expect = 0.28
Identities = 36/145 (24%), Positives = 67/145 (46%), Gaps = 2/145 (1%)
Frame = +2
Query: 5 AGIRHEADLATSLRTRTDSDTA--MAAKCFVLFACVALAHGAMVRRDAPNTILQDLEKHA 178
A I E D A +L+ R SD A +A C L + + A A + + LQ+ EK
Sbjct: 381 ADIDIEIDNAITLKIRGMSDKARMIAKNCAELQSNLRTAQEAATKIEVEMKTLQN-EK-- 437
Query: 179 QDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVL 358
+K + + I +N + K L + +++ + +++L + ALT+ K ++ L
Sbjct: 438 VKLEKEVEQLKFKIKQGQNATAGMKDLLKKEEALRKSLADLPLLDENALTECKLKREKYL 497
Query: 359 QQARQNLERTVEDLRKAHPDVEKQA 433
+Q ++ E + A D EK++
Sbjct: 498 KQLDILKKKCAEAEKNAEKDREKES 522
>U23168-3|AAU87831.1| 4034|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform b protein.
Length = 4034
Score = 31.1 bits (67), Expect = 0.49
Identities = 19/100 (19%), Positives = 48/100 (48%)
Frame = +2
Query: 161 DLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANG 340
+ K+ D +K + +++ S N ++ + + + S+ Q ++ L + +
Sbjct: 1904 NFSKNISDSEKAVFSNLISVITSHNLSTIGTSSETTTASISYQ--DIPEMLAASKLWISR 1961
Query: 341 KAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQT 460
++++ ++ R+ + +TVE D EK A L+EK+ +
Sbjct: 1962 NSEKLKKEIREPVIQTVESFWNTTNDQEKVAVLLNEKIDS 2001
>U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform c protein.
Length = 7548
Score = 31.1 bits (67), Expect = 0.49
Identities = 19/100 (19%), Positives = 48/100 (48%)
Frame = +2
Query: 161 DLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANG 340
+ K+ D +K + +++ S N ++ + + + S+ Q ++ L + +
Sbjct: 1904 NFSKNISDSEKAVFSNLISVITSHNLSTIGTSSETTTASISYQ--DIPEMLAASKLWISR 1961
Query: 341 KAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQT 460
++++ ++ R+ + +TVE D EK A L+EK+ +
Sbjct: 1962 NSEKLKKEIREPVIQTVESFWNTTNDQEKVAVLLNEKIDS 2001
>U41038-5|AAK29710.4| 519|Caenorhabditis elegans Hypothetical
protein F59C12.3 protein.
Length = 519
Score = 30.3 bits (65), Expect = 0.85
Identities = 28/125 (22%), Positives = 52/125 (41%), Gaps = 11/125 (8%)
Frame = +2
Query: 89 VLFACVALAHGAMVRRDAPNTILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEG 268
+L +A + + +R+ L + HA + +K ++E + +A E
Sbjct: 262 MLEKALANSQERLAKREKKCEELSAVVAHADELRKQLNEVWEEQHRRDQMVESERAQWEM 321
Query: 269 SDSMVQQVSELSNSLQGAL--TDANGKAKEVLQQAR---------QNLERTVEDLRKAHP 415
+ ++ SL G+L T G +++++ + Q LER V DLRK H
Sbjct: 322 EKTQLRMQLNKDTSLTGSLKRTTTPGSTEDLIRMRKSIQSKDDKIQQLERMVNDLRKTHG 381
Query: 416 DVEKQ 430
D +Q
Sbjct: 382 DKTEQ 386
>U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin
protein 1 protein.
Length = 1963
Score = 29.9 bits (64), Expect = 1.1
Identities = 26/117 (22%), Positives = 55/117 (47%), Gaps = 8/117 (6%)
Frame = +2
Query: 104 VALAHGAMVRRDAPNTILQDLEKHAQDFQKTISEQFNAI------VNSKNTESLNKALKE 265
+A + A D N +L + E+ A+ + + ++ +A K ES+N+ L+E
Sbjct: 1331 IANINRARQLEDEKNALLDEKEE-AEGLRAHLEKEIHAARQGAGEARRKAEESVNQQLEE 1389
Query: 266 GSDSMVQQVSELSNSLQGALTDANG--KAKEVLQQARQNLERTVEDLRKAHPDVEKQ 430
++ V L L+ + ++K+ +QQ ++ +E++R +H D EK+
Sbjct: 1390 LRKKNLRDVEHLQKQLEESEVAKERILQSKKKIQQELEDSSMELENVRASHRDSEKR 1446
>AF040657-1|AAB95054.1| 758|Caenorhabditis elegans Hypothetical
protein T20H9.6 protein.
Length = 758
Score = 29.9 bits (64), Expect = 1.1
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +2
Query: 338 GKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKL 454
GKA + L+ + N++ + E +R+ D+ K+ T +H K+
Sbjct: 359 GKALQTLKTVQTNVQDSNESIRRGENDMLKEITDVHSKV 397
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.9 bits (64), Expect = 1.1
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +1
Query: 313 TGCVDRRKR*S*GSAPTSSPELGAHSRGSP-QGAPRRRETSHRITREAANPP 465
TG R+KR + PT SP G+ G P +G P + E+S +RE P
Sbjct: 438 TGLPSRQKRQAPEDRPTGSPPTGSPPTGRPHRGGPGKSESSE--SREGPRGP 487
Score = 28.7 bits (61), Expect = 2.6
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 6/46 (13%)
Frame = +1
Query: 349 GSAPTSSPELGAHSRGS------PQGAPRRRETSHRITREAANPPS 468
GS PT SP G RGS P G P R++ R +PP+
Sbjct: 414 GSPPTGSPPTGRPPRGSPPTGSPPTGLPSRQKRQAPEDRPTGSPPT 459
Score = 24.2 bits (50), Expect(2) = 3.1
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 349 GSAPTSSPELGAHSRGSP 402
GS PT SP G RG P
Sbjct: 347 GSPPTGSPPTGRPPRGGP 364
Score = 22.6 bits (46), Expect(2) = 3.1
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +1
Query: 391 RGSPQGAPRRRETSHRITREAANPP 465
RG P+G PR+ +RE P
Sbjct: 383 RGGPRGGPRKSSEESSESREEPRGP 407
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.9 bits (64), Expect = 1.1
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +1
Query: 313 TGCVDRRKR*S*GSAPTSSPELGAHSRGSP-QGAPRRRETSHRITREAANPP 465
TG R+KR + PT SP G+ G P +G P + E+S +RE P
Sbjct: 459 TGLPSRQKRQAPEDRPTGSPPTGSPPTGRPHRGGPGKSESSE--SREGPRGP 508
Score = 28.7 bits (61), Expect = 2.6
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 6/46 (13%)
Frame = +1
Query: 349 GSAPTSSPELGAHSRGS------PQGAPRRRETSHRITREAANPPS 468
GS PT SP G RGS P G P R++ R +PP+
Sbjct: 435 GSPPTGSPPTGRPPRGSPPTGSPPTGLPSRQKRQAPEDRPTGSPPT 480
Score = 24.2 bits (50), Expect(2) = 3.1
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 349 GSAPTSSPELGAHSRGSP 402
GS PT SP G RG P
Sbjct: 368 GSPPTGSPPTGRPPRGGP 385
Score = 22.6 bits (46), Expect(2) = 3.1
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +1
Query: 391 RGSPQGAPRRRETSHRITREAANPP 465
RG P+G PR+ +RE P
Sbjct: 404 RGGPRGGPRKSSEESSESREEPRGP 428
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.9 bits (64), Expect = 1.1
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +1
Query: 313 TGCVDRRKR*S*GSAPTSSPELGAHSRGSP-QGAPRRRETSHRITREAANPP 465
TG R+KR + PT SP G+ G P +G P + E+S +RE P
Sbjct: 444 TGLPSRQKRQAPEDRPTGSPPTGSPPTGRPHRGGPGKSESSE--SREGPRGP 493
Score = 28.7 bits (61), Expect = 2.6
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 6/46 (13%)
Frame = +1
Query: 349 GSAPTSSPELGAHSRGS------PQGAPRRRETSHRITREAANPPS 468
GS PT SP G RGS P G P R++ R +PP+
Sbjct: 420 GSPPTGSPPTGRPPRGSPPTGSPPTGLPSRQKRQAPEDRPTGSPPT 465
Score = 24.2 bits (50), Expect(2) = 3.1
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 349 GSAPTSSPELGAHSRGSP 402
GS PT SP G RG P
Sbjct: 353 GSPPTGSPPTGRPPRGGP 370
Score = 22.6 bits (46), Expect(2) = 3.1
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +1
Query: 391 RGSPQGAPRRRETSHRITREAANPP 465
RG P+G PR+ +RE P
Sbjct: 389 RGGPRGGPRKSSEESSESREEPRGP 413
>AC025716-3|AAK39618.1| 690|Caenorhabditis elegans Hypothetical
protein Y39G10AR.10 protein.
Length = 690
Score = 29.9 bits (64), Expect = 1.1
Identities = 25/108 (23%), Positives = 48/108 (44%)
Frame = +2
Query: 152 ILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTD 331
+L + E+ A Q+T SE+ N + +++ + N LKE + + + S Q ALT
Sbjct: 68 MLDEAEEKASSAQETTSEENNLKILNRDLVAENLELKEMKEELRKIWLSDSKKFQEALTR 127
Query: 332 ANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTRHPEH 475
+ + ++ + + +E +R+ EK QT + EH
Sbjct: 128 ISDENTKLQKDCHE-----LESIRQCAQFALDNCNEELEKTQTENEEH 170
>Z83113-10|CAI46598.1| 556|Caenorhabditis elegans Hypothetical
protein K08H10.2b protein.
Length = 556
Score = 29.5 bits (63), Expect = 1.5
Identities = 19/88 (21%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Frame = +2
Query: 176 AQDFQKTISEQFNAIVNSKN--TESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAK 349
A+D+ + ++ + + +S T + +LKE + +L+N + A+ D AK
Sbjct: 107 AKDYVEDAKDKASDVWDSAKDKTSDVFDSLKEHGEDASDSAKDLANDAEDAIKDTYDSAK 166
Query: 350 EVLQQARQNLERTVEDLRKAHPDVEKQA 433
E A + + ED +++ + +QA
Sbjct: 167 EKASDAFDSAKEHGEDAQESAKEYFEQA 194
>Z83113-9|CAB05548.2| 497|Caenorhabditis elegans Hypothetical
protein K08H10.2a protein.
Length = 497
Score = 29.5 bits (63), Expect = 1.5
Identities = 19/88 (21%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Frame = +2
Query: 176 AQDFQKTISEQFNAIVNSKN--TESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAK 349
A+D+ + ++ + + +S T + +LKE + +L+N + A+ D AK
Sbjct: 107 AKDYVEDAKDKASDVWDSAKDKTSDVFDSLKEHGEDASDSAKDLANDAEDAIKDTYDSAK 166
Query: 350 EVLQQARQNLERTVEDLRKAHPDVEKQA 433
E A + + ED +++ + +QA
Sbjct: 167 EKASDAFDSAKEHGEDAQESAKEYFEQA 194
>Z73975-5|CAA98278.2| 556|Caenorhabditis elegans Hypothetical
protein K08H10.2b protein.
Length = 556
Score = 29.5 bits (63), Expect = 1.5
Identities = 19/88 (21%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Frame = +2
Query: 176 AQDFQKTISEQFNAIVNSKN--TESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAK 349
A+D+ + ++ + + +S T + +LKE + +L+N + A+ D AK
Sbjct: 107 AKDYVEDAKDKASDVWDSAKDKTSDVFDSLKEHGEDASDSAKDLANDAEDAIKDTYDSAK 166
Query: 350 EVLQQARQNLERTVEDLRKAHPDVEKQA 433
E A + + ED +++ + +QA
Sbjct: 167 EKASDAFDSAKEHGEDAQESAKEYFEQA 194
>Z73975-4|CAA98279.2| 497|Caenorhabditis elegans Hypothetical
protein K08H10.2a protein.
Length = 497
Score = 29.5 bits (63), Expect = 1.5
Identities = 19/88 (21%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Frame = +2
Query: 176 AQDFQKTISEQFNAIVNSKN--TESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAK 349
A+D+ + ++ + + +S T + +LKE + +L+N + A+ D AK
Sbjct: 107 AKDYVEDAKDKASDVWDSAKDKTSDVFDSLKEHGEDASDSAKDLANDAEDAIKDTYDSAK 166
Query: 350 EVLQQARQNLERTVEDLRKAHPDVEKQA 433
E A + + ED +++ + +QA
Sbjct: 167 EKASDAFDSAKEHGEDAQESAKEYFEQA 194
>AC024810-9|AAF60766.1| 547|Caenorhabditis elegans Hypothetical
protein Y54E10A.12 protein.
Length = 547
Score = 28.7 bits (61), Expect = 2.6
Identities = 23/110 (20%), Positives = 51/110 (46%), Gaps = 6/110 (5%)
Frame = +2
Query: 146 NTILQDLEKHAQDFQKTISEQFNAIVNSKNTES------LNKALKEGSDSMVQQVSELSN 307
N ++ +K ++F+K + N+I+ ++ S N ++ D+ +Q+++E
Sbjct: 67 NRKAENYQKKWKNFEKESILKLNSIMEKISSHSQPSHHHTNASITLPYDATIQKIAEKEK 126
Query: 308 SLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQ 457
+L L + + L++ + + E+T L K +EK L E+ Q
Sbjct: 127 NLSKLLKELS-IVDSSLKEEKASFEKTQSALLKEKGKIEKDKLMLREEAQ 175
>Z81560-8|CAN86623.1| 173|Caenorhabditis elegans Hypothetical
protein K02E2.8b protein.
Length = 173
Score = 28.3 bits (60), Expect = 3.4
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 270 PTPWCSRSPSYPTVYRVR*PTQTVKLRKC 356
PT WC+ S S+P ++R R P +T +C
Sbjct: 78 PTDWCAISGSFPIMFR-RYPEETTADAQC 105
>Z81560-7|CAB76737.2| 188|Caenorhabditis elegans Hypothetical
protein K02E2.8a protein.
Length = 188
Score = 28.3 bits (60), Expect = 3.4
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 270 PTPWCSRSPSYPTVYRVR*PTQTVKLRKC 356
PT WC+ S S+P ++R R P +T +C
Sbjct: 93 PTDWCAISGSFPIMFR-RYPEETTADAQC 120
>U58753-1|AAC24437.2| 814|Caenorhabditis elegans Hypothetical
protein W03B1.2 protein.
Length = 814
Score = 28.3 bits (60), Expect = 3.4
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = -3
Query: 507 LPSPGSGSPLVCSGWRVCSFSCNAV-ACFSTSGCALRRSSTVRSKFWR 367
LP P S +V W C F + + TSGC S+ + S +WR
Sbjct: 626 LPPPFSLFYVVLRFWYSCFFKYIVIFTTWLTSGCCKCSSTAISSLYWR 673
>Z92777-6|CAE17682.1| 353|Caenorhabditis elegans Hypothetical
protein C17H1.9 protein.
Length = 353
Score = 27.9 bits (59), Expect = 4.5
Identities = 20/97 (20%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Frame = +2
Query: 188 QKTISEQFNAIVNSKNT--ESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQ 361
++ + Q+N+ V +N E K++++ ++ +++L L+ KEV Q
Sbjct: 54 RENMLRQWNSSVAERNAAEEIHRKSVEKFNEEHKTYMAKLEKQLEKINEKGEQDVKEVEQ 113
Query: 362 QARQNLERTVEDLRKAHPDVEKQATALHEKLQTRHPE 472
Q + E+ EDL K H + + +++++ + E
Sbjct: 114 QRVKLEEQRTEDLVKHHESMANLSEKKYKEIEKQRVE 150
>Z83120-1|CAB05583.1| 837|Caenorhabditis elegans Hypothetical
protein R06A4.2 protein.
Length = 837
Score = 27.9 bits (59), Expect = 4.5
Identities = 29/131 (22%), Positives = 62/131 (47%), Gaps = 7/131 (5%)
Frame = +2
Query: 137 DAPNTILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGS--DSMVQQVSELSNS 310
+AP D+E +D +TI + + + +N ++ + KE D + ++++ N+
Sbjct: 526 EAPEHEAMDVEDDDEDLDETIPLESDEQMMDENLDTSVASKKEAMDVDELSNKMTDAVNN 585
Query: 311 LQGALTDANGKAKEVLQQARQNLERTVEDLRK-AHPDVEKQA---TALHEKLQTRHPEHT 478
LQ ++T++ + VL+ A + E L+ + +EK + ++ E + + P
Sbjct: 586 LQKSITESTNET-TVLEGAAAAVILLSESLQNFSRVGMEKSSSDVSSSSEPVSSAEPAAA 644
Query: 479 KGEP-EPGEGS 508
P E G+GS
Sbjct: 645 ALVPSEAGQGS 655
>Z81096-8|CAD54149.2| 922|Caenorhabditis elegans Hypothetical
protein T09E8.1c protein.
Length = 922
Score = 27.9 bits (59), Expect = 4.5
Identities = 19/57 (33%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Frame = +2
Query: 338 GKAKEVLQQA-RQNLERTVEDLRKAHPDVEKQATALHEKLQTRHPEHTKGEPEPGEG 505
G +E L +A R L R RK PD K TAL T P + G+G
Sbjct: 24 GSVRETLSKAIRSTLGRASSMERKDMPDRPKYGTALTAMTSTTPPSPKDRSSDSGDG 80
>Z78065-11|CAD54155.2| 922|Caenorhabditis elegans Hypothetical
protein T09E8.1c protein.
Length = 922
Score = 27.9 bits (59), Expect = 4.5
Identities = 19/57 (33%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Frame = +2
Query: 338 GKAKEVLQQA-RQNLERTVEDLRKAHPDVEKQATALHEKLQTRHPEHTKGEPEPGEG 505
G +E L +A R L R RK PD K TAL T P + G+G
Sbjct: 24 GSVRETLSKAIRSTLGRASSMERKDMPDRPKYGTALTAMTSTTPPSPKDRSSDSGDG 80
>Z48055-11|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical
protein T07C4.10 protein.
Length = 1013
Score = 27.9 bits (59), Expect = 4.5
Identities = 25/73 (34%), Positives = 37/73 (50%)
Frame = +2
Query: 239 ESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPD 418
E L K KE + V+Q+ E+ L+ L + KE+ Q LE+ +EDLRK H
Sbjct: 338 EHLEKQRKEAWEK-VEQLQEMLGELEAELD----RQKELKLQ----LEKDMEDLRKEH-- 386
Query: 419 VEKQATALHEKLQ 457
E Q L ++L+
Sbjct: 387 -EGQMAELEKRLE 398
>Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical
protein T07C4.10 protein.
Length = 1013
Score = 27.9 bits (59), Expect = 4.5
Identities = 25/73 (34%), Positives = 37/73 (50%)
Frame = +2
Query: 239 ESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPD 418
E L K KE + V+Q+ E+ L+ L + KE+ Q LE+ +EDLRK H
Sbjct: 338 EHLEKQRKEAWEK-VEQLQEMLGELEAELD----RQKELKLQ----LEKDMEDLRKEH-- 386
Query: 419 VEKQATALHEKLQ 457
E Q L ++L+
Sbjct: 387 -EGQMAELEKRLE 398
>U80815-6|AAO91675.1| 464|Caenorhabditis elegans Hypothetical
protein W02C12.3d protein.
Length = 464
Score = 27.9 bits (59), Expect = 4.5
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +1
Query: 349 GSAPTSSPELGAHSRGSPQGAPRRRETSHRITREAANPP 465
GSAPT S G S G+ +PR+ + +H++ PP
Sbjct: 26 GSAPTQS-YFGGGSSGAALSSPRKMQQTHQMLFGNIQPP 63
>U80815-5|AAO91676.1| 439|Caenorhabditis elegans Hypothetical
protein W02C12.3e protein.
Length = 439
Score = 27.9 bits (59), Expect = 4.5
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +1
Query: 349 GSAPTSSPELGAHSRGSPQGAPRRRETSHRITREAANPP 465
GSAPT S G S G+ +PR+ + +H++ PP
Sbjct: 26 GSAPTQS-YFGGGSSGAALSSPRKMQQTHQMLFGNIQPP 63
>U80815-4|AAO91674.1| 524|Caenorhabditis elegans Hypothetical
protein W02C12.3c protein.
Length = 524
Score = 27.9 bits (59), Expect = 4.5
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +1
Query: 349 GSAPTSSPELGAHSRGSPQGAPRRRETSHRITREAANPP 465
GSAPT S G S G+ +PR+ + +H++ PP
Sbjct: 86 GSAPTQS-YFGGGSSGAALSSPRKMQQTHQMLFGNIQPP 123
>U80815-3|AAK73899.1| 499|Caenorhabditis elegans Hypothetical
protein W02C12.3b protein.
Length = 499
Score = 27.9 bits (59), Expect = 4.5
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +1
Query: 349 GSAPTSSPELGAHSRGSPQGAPRRRETSHRITREAANPP 465
GSAPT S G S G+ +PR+ + +H++ PP
Sbjct: 86 GSAPTQS-YFGGGSSGAALSSPRKMQQTHQMLFGNIQPP 123
>U40427-1|AAA81467.2| 798|Caenorhabditis elegans Hypothetical
protein F43C9.3 protein.
Length = 798
Score = 27.9 bits (59), Expect = 4.5
Identities = 13/61 (21%), Positives = 27/61 (44%)
Frame = +2
Query: 224 NSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLR 403
++ N NKAL + + Q++ E+SN ++ A + R+ V+++
Sbjct: 105 SNSNLSKFNKALSMSTSHLTQEIEEISNKRLSMALPSSSAAPFITSLKRRETFTKVDEIT 164
Query: 404 K 406
K
Sbjct: 165 K 165
>AC024774-2|AAM43790.1| 249|Caenorhabditis elegans Ubiquitin
c-terminal hydrolase(family 1) protein 2 protein.
Length = 249
Score = 27.9 bits (59), Expect = 4.5
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = +2
Query: 308 SLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTRHPEH 475
+L+ + NGK + ++A+ E DL A D+ + E+ +T HPEH
Sbjct: 107 NLENRVNLGNGKFSKWFEKAKLVGEGERSDLLLADTDLAEAHKETAEEGETEHPEH 162
>Z81077-12|CAH19097.1| 316|Caenorhabditis elegans Hypothetical
protein F36A2.14 protein.
Length = 316
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/49 (24%), Positives = 26/49 (53%)
Frame = +2
Query: 341 KAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTRHPEHTKGE 487
K+K+ +R+N ++T ED+ ++ D K A + + ++ + K E
Sbjct: 94 KSKDESGSSRKNSKKTAEDMDQSSDDTTKPAEETKKTVSSKKQKKVKSE 142
>Z68159-8|CAD01080.1| 310|Caenorhabditis elegans Hypothetical
protein C33D9.9 protein.
Length = 310
Score = 27.5 bits (58), Expect = 6.0
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +2
Query: 197 ISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAK-EVLQQ 364
I+ N + N + + + KALKE + Q+S+L+ LQG L + + + K E LQQ
Sbjct: 250 IASMKNCLKNEE-IQKMQKALKEKDE----QISKLTEQLQGLLINRDKETKVEDLQQ 301
>U97002-4|AAB52267.1| 630|Caenorhabditis elegans Hypothetical
protein K09H11.4 protein.
Length = 630
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/48 (27%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +2
Query: 359 QQARQNLERTVEDLRKAHPDVEKQATALHEKLQ-TRHPEHTKGEPEPG 499
++ R+ R +D R+ H + + + EK++ +HP + G P PG
Sbjct: 497 ERGRKEDGREKDDFREDHGREDHGKSEVPEKVEHEQHPPQSHGSPHPG 544
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 27.5 bits (58), Expect = 6.0
Identities = 21/90 (23%), Positives = 45/90 (50%)
Frame = +2
Query: 161 DLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANG 340
DLE+ ++ + +S+ N K + + ++ + + + S++S L+D +
Sbjct: 1099 DLERRIRELEDELSQIGRG--NDKTENDITELKRKHAAEIDKLKSDISALHDKHLSDLDD 1156
Query: 341 KAKEVLQQARQNLERTVEDLRKAHPDVEKQ 430
+ KE +A +NL+ +DLR ++EKQ
Sbjct: 1157 E-KEQYGKAVENLKSVEDDLRDKLNNLEKQ 1185
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 27.5 bits (58), Expect = 6.0
Identities = 21/90 (23%), Positives = 45/90 (50%)
Frame = +2
Query: 161 DLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANG 340
DLE+ ++ + +S+ N K + + ++ + + + S++S L+D +
Sbjct: 1172 DLERRIRELEDELSQIGRG--NDKTENDITELKRKHAAEIDKLKSDISALHDKHLSDLDD 1229
Query: 341 KAKEVLQQARQNLERTVEDLRKAHPDVEKQ 430
+ KE +A +NL+ +DLR ++EKQ
Sbjct: 1230 E-KEQYGKAVENLKSVEDDLRDKLNNLEKQ 1258
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 27.5 bits (58), Expect = 6.0
Identities = 21/90 (23%), Positives = 45/90 (50%)
Frame = +2
Query: 161 DLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANG 340
DLE+ ++ + +S+ N K + + ++ + + + S++S L+D +
Sbjct: 1172 DLERRIRELEDELSQIGRG--NDKTENDITELKRKHAAEIDKLKSDISALHDKHLSDLDD 1229
Query: 341 KAKEVLQQARQNLERTVEDLRKAHPDVEKQ 430
+ KE +A +NL+ +DLR ++EKQ
Sbjct: 1230 E-KEQYGKAVENLKSVEDDLRDKLNNLEKQ 1258
>U14635-5|AAN63442.1| 464|Caenorhabditis elegans Hypothetical
protein C27H5.2d protein.
Length = 464
Score = 27.5 bits (58), Expect = 6.0
Identities = 22/81 (27%), Positives = 38/81 (46%)
Frame = +2
Query: 224 NSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLR 403
N K TE+ D Q++ +S +L+ L ++ E L + NLE V +L+
Sbjct: 211 NLKETETNLSEANAMVDCKQQELEMVSEALK-RLEESRHTISE-LNRKSGNLEENVTELQ 268
Query: 404 KAHPDVEKQATALHEKLQTRH 466
+VE++ L +L+T H
Sbjct: 269 MKLMNVEEENHGLKAQLETSH 289
>U14635-4|AAL02446.1| 459|Caenorhabditis elegans Hypothetical
protein C27H5.2b protein.
Length = 459
Score = 27.5 bits (58), Expect = 6.0
Identities = 22/81 (27%), Positives = 38/81 (46%)
Frame = +2
Query: 224 NSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLR 403
N K TE+ D Q++ +S +L+ L ++ E L + NLE V +L+
Sbjct: 211 NLKETETNLSEANAMVDCKQQELEMVSEALK-RLEESRHTISE-LNRKSGNLEENVTELQ 268
Query: 404 KAHPDVEKQATALHEKLQTRH 466
+VE++ L +L+T H
Sbjct: 269 MKLMNVEEENHGLKAQLETSH 289
>U14635-3|AAN63441.1| 491|Caenorhabditis elegans Hypothetical
protein C27H5.2c protein.
Length = 491
Score = 27.5 bits (58), Expect = 6.0
Identities = 22/81 (27%), Positives = 38/81 (46%)
Frame = +2
Query: 224 NSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLR 403
N K TE+ D Q++ +S +L+ L ++ E L + NLE V +L+
Sbjct: 211 NLKETETNLSEANAMVDCKQQELEMVSEALK-RLEESRHTISE-LNRKSGNLEENVTELQ 268
Query: 404 KAHPDVEKQATALHEKLQTRH 466
+VE++ L +L+T H
Sbjct: 269 MKLMNVEEENHGLKAQLETSH 289
>U14635-2|AAC46656.2| 522|Caenorhabditis elegans Hypothetical
protein C27H5.2a protein.
Length = 522
Score = 27.5 bits (58), Expect = 6.0
Identities = 22/81 (27%), Positives = 38/81 (46%)
Frame = +2
Query: 224 NSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLR 403
N K TE+ D Q++ +S +L+ L ++ E L + NLE V +L+
Sbjct: 211 NLKETETNLSEANAMVDCKQQELEMVSEALK-RLEESRHTISE-LNRKSGNLEENVTELQ 268
Query: 404 KAHPDVEKQATALHEKLQTRH 466
+VE++ L +L+T H
Sbjct: 269 MKLMNVEEENHGLKAQLETSH 289
>AC024781-3|AAK39330.2| 2203|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 85
protein.
Length = 2203
Score = 27.5 bits (58), Expect = 6.0
Identities = 23/104 (22%), Positives = 46/104 (44%), Gaps = 8/104 (7%)
Frame = +2
Query: 188 QKTISEQFNAIVNSKNTESLNKALKEGSDSMV--QQVSELSNSLQGALTDANGKAKEVLQ 361
QK EQ I + + K +E + +++ L + + L + + +E ++
Sbjct: 185 QKLYEEQCRQIEKERKEQEERKRKQELEEQRKRNEELKRLRIAEEKRLLEEQQRLREQME 244
Query: 362 QAR----QNLERT--VEDLRKAHPDVEKQATALHEKLQTRHPEH 475
+ R + LE +ED R+ D+E Q A+ +K+Q +H
Sbjct: 245 RERLAEIKRLEEAARLEDERRIAADIEAQKQAMLQKMQAEQNKH 288
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
K12F2.1 protein.
Length = 1969
Score = 27.1 bits (57), Expect = 7.9
Identities = 29/120 (24%), Positives = 45/120 (37%), Gaps = 7/120 (5%)
Frame = +2
Query: 155 LQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDA 334
LQ L K + E+ A NS+ +++ E + + E A +A
Sbjct: 1117 LQRLIKELTARNAELEEELEAERNSRQKSDRSRSEAERELEELTERLEQQGGATAAQLEA 1176
Query: 335 NGKAKEVLQQARQ-------NLERTVEDLRKAHPDVEKQATALHEKLQTRHPEHTKGEPE 493
N K + + + R+ N E + LRK H D L E+L+T K E E
Sbjct: 1177 NKKREAEIAKLRREKEEDSLNHETAISSLRKRHGD---SVAELTEQLETLQKLKAKSEAE 1233
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
protein.
Length = 1969
Score = 27.1 bits (57), Expect = 7.9
Identities = 29/120 (24%), Positives = 45/120 (37%), Gaps = 7/120 (5%)
Frame = +2
Query: 155 LQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDA 334
LQ L K + E+ A NS+ +++ E + + E A +A
Sbjct: 1117 LQRLIKELTARNAELEEELEAERNSRQKSDRSRSEAERELEELTERLEQQGGATAAQLEA 1176
Query: 335 NGKAKEVLQQARQ-------NLERTVEDLRKAHPDVEKQATALHEKLQTRHPEHTKGEPE 493
N K + + + R+ N E + LRK H D L E+L+T K E E
Sbjct: 1177 NKKREAEIAKLRREKEEDSLNHETAISSLRKRHGD---SVAELTEQLETLQKLKAKSEAE 1233
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,164,574
Number of Sequences: 27780
Number of extensions: 215264
Number of successful extensions: 1139
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 1039
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1133
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 988489374
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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