Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_E01
(455 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1952.06c |||DUF1716 family protein|Schizosaccharomyces pombe... 87 1e-18
SPBC3E7.16c |leu3|SPBC4F6.03c|2-isopropylmalate synthase|Schizos... 33 0.021
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 31 0.11
SPBP8B7.29 |||para-aminobenzoate synthase |Schizosaccharomyces p... 27 1.0
SPBC23G7.13c |||urea transporter |Schizosaccharomyces pombe|chr ... 27 1.4
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 27 1.4
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 27 1.8
SPAC694.02 |||DEAD/DEAH box helicase|Schizosaccharomyces pombe|c... 26 2.4
SPBC9B6.11c |||CCR4/nocturin family endoribonuclease|Schizosacch... 26 3.1
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 26 3.1
SPAPB8E5.02c |rpn502|rpn5, rpn5-b|19S proteasome regulatory subu... 25 4.2
SPBC902.02c |ctf18|chl12|DNA replication factor C complex subuni... 25 4.2
SPAC1420.03 |rpn501|rpn5-a, rpn5|19S proteasome regulatory subun... 25 4.2
SPBC21B10.06c |||sequence orphan|Schizosaccharomyces pombe|chr 2... 25 5.5
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe... 25 5.5
SPACUNK4.12c |mug138||metallopeptidase|Schizosaccharomyces pombe... 25 5.5
SPCP20C8.02c |||S. pombe specific UPF0321 family protein 1|Schiz... 25 5.5
SPBC21B10.07 |||glycosyl hydrolase family 16|Schizosaccharomyces... 25 5.5
SPBC1604.02c |||PPR repeat protein|Schizosaccharomyces pombe|chr... 25 7.3
SPAC23D3.13c |||guanyl-nucleotide exchange factor|Schizosaccharo... 25 7.3
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 25 7.3
SPCC895.03c |||SUA5/yciO/yrdC family|Schizosaccharomyces pombe|c... 24 9.6
SPBC15D4.01c ||SPBC2D10.21c|kinesin-like protein|Schizosaccharom... 24 9.6
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 24 9.6
SPBP8B7.02 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 24 9.6
>SPAC1952.06c |||DUF1716 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 564
Score = 87.0 bits (206), Expect = 1e-18
Identities = 42/150 (28%), Positives = 80/150 (53%)
Frame = +3
Query: 3 TMDETAVKKLVLTFEKKALRNREMRIKFPDQPEKFMDSEIDLHDALQDLSAVATVPDQYP 182
++ T +K++V+ EK N+E+RIK+ P++F++SE DL ++ + ++ P P
Sbjct: 80 SLTPTELKRMVVRLEKTINNNQELRIKYSTSPQRFIESEADLDLEIRSFNVLSEYPILIP 139
Query: 183 LLVELKCINSLLELLSHDNTDVSTKVVQLLQELTDVDILNESXXXXXXXXXXXXXXXXXX 362
+ ++L C+++ LEL++H+N D++ V++LL ELTD D+
Sbjct: 140 IFLKLDCVSTFLELMNHENADITITVLELLIELTDEDV---DPDALNSLFTSLIDSGLLP 196
Query: 363 XXXXXXSRLDEQVPDERDAVHNTLGIVENI 452
R DE ++R V+ L ++EN+
Sbjct: 197 LLSNTIKRFDESNEEDRHGVYCVLSLMENL 226
>SPBC3E7.16c |leu3|SPBC4F6.03c|2-isopropylmalate
synthase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 584
Score = 33.1 bits (72), Expect = 0.021
Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Frame = +3
Query: 27 KLVLTFEKKALRNREMRIKFPDQPEKFMDSE----IDLHDALQDL---SAVATVPDQYPL 185
K+V K AL ++E F PE F D+E +++ +A++ + SA + P
Sbjct: 171 KIVTAATKNALESKETNWGFEYSPETFSDTEPDFALEVCEAVKGMWKPSAAQPIIFNLPA 230
Query: 186 LVELKCINSLLELLSHDNTDVSTK 257
VE+ N+ +L+ + +T++S +
Sbjct: 231 TVEMSTPNTYADLIEYFSTNISER 254
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 30.7 bits (66), Expect = 0.11
Identities = 25/104 (24%), Positives = 48/104 (46%)
Frame = -2
Query: 421 TASLSSGTCSSKRDXXXXXXXXXXXXXXALINSSAPSSLSFKISTSVSSCKSWTTFVDTS 242
T++ S+ + SS + SS+P+S S IS+S SS S + TS
Sbjct: 301 TSTSSTISSSSSSSSSFSSTLSSSSMSSSSSFSSSPTSSSSTISSSSSSPSSSSFSSTTS 360
Query: 241 VLSCDNNSNKELIHFNSTSNGYWSGTVATALKSCNASCRSISLS 110
++ + + +STS+ + + +++ + ++S S SLS
Sbjct: 361 SSKSSSSFSSTVSSSSSTSSSTLTSSSSSSSRPASSSSHSSSLS 404
>SPBP8B7.29 |||para-aminobenzoate synthase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 718
Score = 27.5 bits (58), Expect = 1.0
Identities = 18/62 (29%), Positives = 29/62 (46%)
Frame = -2
Query: 292 STSVSSCKSWTTFVDTSVLSCDNNSNKELIHFNSTSNGYWSGTVATALKSCNASCRSISL 113
S S+ K++ + DT + C N+ +K F+ N Y A LKS + S + S+
Sbjct: 184 SKSLKIFKNFLSLADTPNIQCVNSFSKSANGFSHNLNRYDISPAAFILKSGSPSLQIHSV 243
Query: 112 SI 107
I
Sbjct: 244 EI 245
>SPBC23G7.13c |||urea transporter |Schizosaccharomyces pombe|chr
2|||Manual
Length = 664
Score = 27.1 bits (57), Expect = 1.4
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -2
Query: 226 NNSNKELIHFNSTSNGYWSGTVATALKS 143
NN N+ HFN+ S+ +G VA+A+ S
Sbjct: 37 NNENQTSEHFNTASHSVRTGLVASAVVS 64
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 27.1 bits (57), Expect = 1.4
Identities = 26/102 (25%), Positives = 44/102 (43%), Gaps = 1/102 (0%)
Frame = -2
Query: 412 LSSGTCSSKRDXXXXXXXXXXXXXXALINSS-APSSLSFKISTSVSSCKSWTTFVDTSVL 236
LSS KR +L +SS A SSL+ S + SS S T+ TS
Sbjct: 49 LSSVPTLLKRATTSYNYNTSSASSSSLTSSSAASSSLTSSSSLASSSTNSTTSASPTSSS 108
Query: 235 SCDNNSNKELIHFNSTSNGYWSGTVATALKSCNASCRSISLS 110
+++ + +ST++ + + T+ ++S S SL+
Sbjct: 109 LTSSSATSSSLASSSTTSSSLASSSITSSSLASSSITSSSLA 150
Score = 26.2 bits (55), Expect = 2.4
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = -2
Query: 325 SSAP-SSLSFKISTSVSSCKSWTTFVDTSVLSCDNNSNKELIHFNSTSNGYWSGTVATAL 149
SS P +S + STSVSS ++ +SVL + S+ L NST+ S T T++
Sbjct: 501 SSTPLTSANSTTSTSVSSTAP--SYNTSSVLPTSSVSSTPLSSANSTTATSASSTPLTSV 558
Query: 148 KSCNASCRS 122
S A+ S
Sbjct: 559 NSTTATSAS 567
Score = 24.6 bits (51), Expect = 7.3
Identities = 26/98 (26%), Positives = 39/98 (39%), Gaps = 1/98 (1%)
Frame = -2
Query: 421 TASLSSGTCSSKRDXXXXXXXXXXXXXXALINSSAPSSLSFKISTSVSSCKSWTTFVDTS 242
T S SS SS + +NS+ +S S TSV+S + T+ T
Sbjct: 316 TTSASSTPLSSVSSANSTTATSTSSTPLSSVNSTTATSASSTPLTSVNSTTA-TSASSTP 374
Query: 241 VLSCDNNSNKELIHFNSTS-NGYWSGTVATALKSCNAS 131
+ S ++ S TS N S +V++ S N S
Sbjct: 375 LTSVNSTSATSASSTPLTSANSTTSTSVSSTAPSYNTS 412
Score = 24.6 bits (51), Expect = 7.3
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = -2
Query: 325 SSAP-SSLSFKISTSVSSCKSWTTFVDTSVLSCDNNSNKELIHFNSTSNGYWSGTVATAL 149
SS P +S + STSVSS ++ +SVL + S+ L NST+ S T +++
Sbjct: 387 SSTPLTSANSTTSTSVSSTAP--SYNTSSVLPTSSVSSTPLSSANSTTATSASSTPLSSV 444
Query: 148 KSCNASCRS 122
S A+ S
Sbjct: 445 NSTTATSAS 453
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 26.6 bits (56), Expect = 1.8
Identities = 28/106 (26%), Positives = 45/106 (42%)
Frame = -2
Query: 421 TASLSSGTCSSKRDXXXXXXXXXXXXXXALINSSAPSSLSFKISTSVSSCKSWTTFVDTS 242
++S SS + SS + +SS SS S S+S SS S ++ T+
Sbjct: 184 SSSSSSSSSSSSSSSSSSSSSSSSVPITSSTSSSHSSSSSSSSSSSSSSRPSSSSSFITT 243
Query: 241 VLSCDNNSNKELIHFNSTSNGYWSGTVATALKSCNASCRSISLSIN 104
+ S S + +S+S+ +TA + NAS S S+N
Sbjct: 244 MSSSTFISTVTVTPSSSSSSTSSEVPSSTAALALNASKASNHTSLN 289
>SPAC694.02 |||DEAD/DEAH box helicase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1717
Score = 26.2 bits (55), Expect = 2.4
Identities = 11/38 (28%), Positives = 25/38 (65%)
Frame = +3
Query: 84 FPDQPEKFMDSEIDLHDALQDLSAVATVPDQYPLLVEL 197
F +P+K ++S+++LH++ L A++ + P+L +L
Sbjct: 1050 FCSEPQKVVNSQLELHNSAYSLDAIS--QNLLPMLKDL 1085
>SPBC9B6.11c |||CCR4/nocturin family
endoribonuclease|Schizosaccharomyces pombe|chr
2|||Manual
Length = 502
Score = 25.8 bits (54), Expect = 3.1
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -3
Query: 450 YFQQYRVYYEQHLSHQVLVHLSVIDYEEV 364
Y YR +Y+QH + VL L + Y+ V
Sbjct: 388 YVPHYRSFYQQHEQNPVLFSLYSVGYKLV 416
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 25.8 bits (54), Expect = 3.1
Identities = 29/111 (26%), Positives = 46/111 (41%), Gaps = 5/111 (4%)
Frame = -2
Query: 415 SLSSGTCSSKRDXXXXXXXXXXXXXXALINSSA-PSSLSFKISTSVSSCKSWTTFVDTS- 242
S SS + SSK + SSA PSS S SS + TT +S
Sbjct: 178 SSSSSSSSSKSSSSSSSSSKSSSSSSSSSKSSASPSSSKSSSKFSSSSFITSTTPASSSS 237
Query: 241 ---VLSCDNNSNKELIHFNSTSNGYWSGTVATALKSCNASCRSISLSINFS 98
++S ++ + S++ S V++A + +AS S S S++ S
Sbjct: 238 SGAIVSNAKTASTDDSSSASSATSSVSSVVSSASSALSASASSASASVSSS 288
>SPAPB8E5.02c |rpn502|rpn5, rpn5-b|19S proteasome regulatory subunit
Rpn502|Schizosaccharomyces pombe|chr 1|||Manual
Length = 443
Score = 25.4 bits (53), Expect = 4.2
Identities = 30/115 (26%), Positives = 57/115 (49%), Gaps = 15/115 (13%)
Frame = +3
Query: 6 MDETAVKKL-VLTFEKKALRNREMRIKFPDQPEKFM---DSEIDL---HDALQDLSAVAT 164
M T KK+ V FEK+ +++ +++K+ +Q + D+ +D+ + A+ D + V
Sbjct: 189 MASTYTKKINVKFFEKEDVQS--LKLKYYEQKIRIGLHDDAYLDVCKYYRAVYDTAVVQE 246
Query: 165 VPDQYPLLVE-LKCI-------NSLLELLSHDNTDVSTKVVQLLQELTDVDILNE 305
P+++ ++E + C N +LL N D + LLQ+L I+NE
Sbjct: 247 DPEKWKEILENVVCFALLTPYDNEQADLLHRINADHKLNSLPLLQQLVKCFIVNE 301
>SPBC902.02c |ctf18|chl12|DNA replication factor C complex subunit
Ctf18|Schizosaccharomyces pombe|chr 2|||Manual
Length = 960
Score = 25.4 bits (53), Expect = 4.2
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +3
Query: 201 CINSLLELLSHDNTDVSTKVVQLLQ 275
CINSL +LLS +N + ++ ++LLQ
Sbjct: 593 CINSL-QLLSLNNKRIDSETIKLLQ 616
>SPAC1420.03 |rpn501|rpn5-a, rpn5|19S proteasome regulatory subunit
Rpn501|Schizosaccharomyces pombe|chr 1|||Manual
Length = 443
Score = 25.4 bits (53), Expect = 4.2
Identities = 30/115 (26%), Positives = 57/115 (49%), Gaps = 15/115 (13%)
Frame = +3
Query: 6 MDETAVKKL-VLTFEKKALRNREMRIKFPDQPEKFM---DSEIDL---HDALQDLSAVAT 164
M T KK+ V FEK+ +++ +++K+ +Q + D+ +D+ + A+ D + V
Sbjct: 189 MASTYTKKINVKFFEKEDVQS--LKLKYYEQKIRIGLHDDAYLDVCKYYRAVYDTAVVQE 246
Query: 165 VPDQYPLLVE-LKCI-------NSLLELLSHDNTDVSTKVVQLLQELTDVDILNE 305
P+++ ++E + C N +LL N D + LLQ+L I+NE
Sbjct: 247 DPEKWKEILENVVCFALLTPYDNEQADLLHRINADHKLNSLPLLQQLVKCFIVNE 301
>SPBC21B10.06c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 470
Score = 25.0 bits (52), Expect = 5.5
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = -2
Query: 292 STSVSSCKSWTTFVDTSVLSCDNNSNKELIHFNSTSNGYWS 170
S+ + C WT F+ LS N L F +TSN +S
Sbjct: 152 SSLIRICHCWTYFIRIMGLSSLNKFVNLLHDFETTSNRVYS 192
>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 721
Score = 25.0 bits (52), Expect = 5.5
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +3
Query: 174 QYPLLVELKCINSLLELLSHDNTDVSTKVVQLLQELTDVDIL 299
+YP +K + S ELL HD+ VS+ + D DIL
Sbjct: 213 KYPSF-PIKMLPSQAELLMHDHCHVSSDYTHDIAHALDRDIL 253
>SPACUNK4.12c |mug138||metallopeptidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 969
Score = 25.0 bits (52), Expect = 5.5
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -1
Query: 98 WLIWKLYSHFSVP*SLFFK 42
W W+LYS S P S+F K
Sbjct: 159 WRFWRLYSVLSNPKSVFSK 177
>SPCP20C8.02c |||S. pombe specific UPF0321 family protein
1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 111
Score = 25.0 bits (52), Expect = 5.5
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = +3
Query: 189 VELKCINSLLELLSHDNTDVSTKVVQLL--QELTDVDILNES 308
V ++ N LL ++ NTD + QLL Q TD I +S
Sbjct: 54 VRIEAYNYLLNSITETNTDTDAYLCQLLTGQYTTDCYIFGDS 95
>SPBC21B10.07 |||glycosyl hydrolase family 16|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 419
Score = 25.0 bits (52), Expect = 5.5
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = -2
Query: 256 FVDTSVLSCDNNSNKELIHFNSTSNGYWSGTVATALKSCNASC 128
F DT D +K+ I F+ T G W+G+ + C SC
Sbjct: 352 FPDTKC-DIDKMFSKQKILFDLTFCGDWAGSSVYSSAGCPGSC 393
>SPBC1604.02c |||PPR repeat protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 697
Score = 24.6 bits (51), Expect = 7.3
Identities = 23/72 (31%), Positives = 32/72 (44%)
Frame = -2
Query: 238 LSCDNNSNKELIHFNSTSNGYWSGTVATALKSCNASCRSISLSINFSG*SGNFILISLFL 59
L+C NS KELI +N YW ++ + KS I+ +G S N + L
Sbjct: 177 LTCFENSPKELIDYN-----YWLSWLSFS-KSSPVVLWLTFTRISSAGLSPNAETFEILL 230
Query: 58 RAFFSKVRTNFF 23
AF S+ FF
Sbjct: 231 VAFASQKNFWFF 242
>SPAC23D3.13c |||guanyl-nucleotide exchange
factor|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1616
Score = 24.6 bits (51), Expect = 7.3
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = -3
Query: 156 LHLSPVMHHVDQFHYP*TFLVDLETLFSFLCS 61
L +S +++ + Q HY + +D+E +FSF+ S
Sbjct: 264 LRISRILNIIFQ-HYVTSLTLDIEVIFSFIIS 294
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 24.6 bits (51), Expect = 7.3
Identities = 14/71 (19%), Positives = 35/71 (49%)
Frame = -2
Query: 328 NSSAPSSLSFKISTSVSSCKSWTTFVDTSVLSCDNNSNKELIHFNSTSNGYWSGTVATAL 149
++S P+ LS + + S+ + T TS++ + ++ +NST+ + ++ +
Sbjct: 3819 STSNPNILSSTVLSFDSTITNSFTTASTSIMKTTSLNSNSYKWYNSTTQSVYYNATSSTV 3878
Query: 148 KSCNASCRSIS 116
N++ R+ S
Sbjct: 3879 PWSNSTFRNTS 3889
>SPCC895.03c |||SUA5/yciO/yrdC family|Schizosaccharomyces pombe|chr
3|||Manual
Length = 408
Score = 24.2 bits (50), Expect = 9.6
Identities = 13/57 (22%), Positives = 26/57 (45%)
Frame = +3
Query: 57 LRNREMRIKFPDQPEKFMDSEIDLHDALQDLSAVATVPDQYPLLVELKCINSLLELL 227
LRN + + FP + + ++ +A+ + P PL+V + ++ L LL
Sbjct: 49 LRNTDYPVAFPTETVYGLGADARRTEAVLSIYKAKNRPADNPLIVHVASLDQLRRLL 105
>SPBC15D4.01c ||SPBC2D10.21c|kinesin-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 24.2 bits (50), Expect = 9.6
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +2
Query: 47 KKGSKEQRNENKVSRSTRKV 106
K+ S Q+NEN+ RS+RK+
Sbjct: 537 KESSATQQNENQHKRSSRKL 556
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 24.2 bits (50), Expect = 9.6
Identities = 25/100 (25%), Positives = 38/100 (38%)
Frame = -2
Query: 409 SSGTCSSKRDXXXXXXXXXXXXXXALINSSAPSSLSFKISTSVSSCKSWTTFVDTSVLSC 230
+S T +S SS+ S S++VS+ T+F T S
Sbjct: 647 TSTTFTSSTSISTSSSSTATSSTSFASESSSFYSNVTTSSSTVSTPPPTTSFPSTFTTSF 706
Query: 229 DNNSNKELIHFNSTSNGYWSGTVATALKSCNASCRSISLS 110
+S+ I NST S + T +K+ + S S S S
Sbjct: 707 ITSSSLSSIPNNSTEVKTASTSSGTEIKTASTSSGSSSSS 746
>SPBP8B7.02 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 261
Score = 24.2 bits (50), Expect = 9.6
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3
Query: 207 NSLLELLSHDNTDVSTKVVQL 269
+SLL HD+ DVST V +L
Sbjct: 218 DSLLTFTRHDSEDVSTSVEKL 238
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,745,279
Number of Sequences: 5004
Number of extensions: 32562
Number of successful extensions: 126
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 126
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 170285640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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