Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_D24
(628 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M58458-1|AAA63255.1| 263|Homo sapiens ribosomal protein S4X iso... 368 e-101
CR456735-1|CAG33016.1| 263|Homo sapiens RPS4X protein. 368 e-101
BC100904-1|AAI00905.1| 263|Homo sapiens RPS4X protein protein. 368 e-101
BC100903-1|AAI00904.1| 263|Homo sapiens RPS4X protein protein. 368 e-101
BC071662-1|AAH71662.1| 263|Homo sapiens ribosomal protein S4, X... 368 e-101
BC000472-1|AAH00472.1| 263|Homo sapiens ribosomal protein S4, X... 368 e-101
AF041428-1|AAB96968.1| 263|Homo sapiens ribosomal protein s4 X ... 368 e-101
AK222479-1|BAD96199.1| 263|Homo sapiens ribosomal protein S4, X... 366 e-101
M58459-1|AAA63256.1| 263|Homo sapiens ribosomal protein S4Y iso... 359 3e-99
BC100906-1|AAI00907.1| 262|Homo sapiens RPS4Y1 protein protein. 359 3e-99
BC100905-1|AAI00906.1| 263|Homo sapiens ribosomal protein S4, Y... 359 3e-99
BC010286-1|AAH10286.1| 263|Homo sapiens ribosomal protein S4, Y... 359 3e-99
AF041427-1|AAB96967.1| 263|Homo sapiens ribosomal protein s4 Y ... 359 3e-99
AK222594-1|BAD96314.1| 263|Homo sapiens ribosomal protein S4, Y... 357 2e-98
AF497481-1|AAM18074.1| 263|Homo sapiens ribosomal protein S4 pr... 343 3e-94
BC007308-1|AAH07308.2| 243|Homo sapiens RPS4X protein protein. 334 1e-91
M22146-1|AAA36597.1| 244|Homo sapiens protein ( Human scar prot... 332 8e-91
Z70767-1|CAA94808.1| 59|Homo sapiens ribosomal protein S4 prot... 109 8e-24
BC064028-1|AAH64028.1| 237|Homo sapiens immediate early respons... 33 0.63
AL158151-18|CAI12875.1| 404|Homo sapiens immediate early respon... 33 1.1
U14518-1|AAA57416.1| 140|Homo sapiens centromere protein-A prot... 32 1.9
BT007246-1|AAP35910.1| 140|Homo sapiens centromere protein A, 1... 32 1.9
BC002703-1|AAH02703.1| 140|Homo sapiens CENPA protein protein. 32 1.9
BC000881-1|AAH00881.1| 114|Homo sapiens centromere protein A pr... 32 1.9
AY358764-1|AAQ89124.1| 182|Homo sapiens EPQL1862 protein. 32 1.9
AK096970-1|BAC04915.1| 485|Homo sapiens protein ( Homo sapiens ... 32 1.9
AC011740-3|AAX93267.1| 140|Homo sapiens unknown protein. 32 1.9
BC046248-1|AAH46248.1| 503|Homo sapiens similar to CG32656-PA p... 31 4.4
AK125035-1|BAC86028.1| 1253|Homo sapiens protein ( Homo sapiens ... 31 4.4
AK024165-1|BAB14843.1| 182|Homo sapiens protein ( Homo sapiens ... 31 4.4
AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein. 31 4.4
U96710-1|AAB81132.1| 351|Homo sapiens 8-oxoguanine DNA-glycosyl... 30 5.8
AF026691-1|AAB84013.1| 341|Homo sapiens 8-oxoguanine DNA glycos... 30 5.8
AJ301497-1|CAC34202.1| 76|Homo sapiens T-cell receptor beta ch... 30 7.7
>M58458-1|AAA63255.1| 263|Homo sapiens ribosomal protein S4X
isoform protein.
Length = 263
Score = 368 bits (905), Expect = e-101
Identities = 162/207 (78%), Positives = 184/207 (88%)
Frame = +3
Query: 6 RGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVL 185
RGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV
Sbjct: 3 RGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVK 62
Query: 186 KIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYK 365
KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYK
Sbjct: 63 KICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYK 122
Query: 366 LCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCM 545
LCKVR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ T KI DFIKFD+GNLCM
Sbjct: 123 LCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCM 182
Query: 546 ITGGRNLGRVGTIVSRERHPGSFDIVH 626
+TGG NLGR+G I +RERHPGSFD+VH
Sbjct: 183 VTGGANLGRIGVITNRERHPGSFDVVH 209
>CR456735-1|CAG33016.1| 263|Homo sapiens RPS4X protein.
Length = 263
Score = 368 bits (905), Expect = e-101
Identities = 162/207 (78%), Positives = 184/207 (88%)
Frame = +3
Query: 6 RGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVL 185
RGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV
Sbjct: 3 RGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVK 62
Query: 186 KIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYK 365
KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYK
Sbjct: 63 KICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYK 122
Query: 366 LCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCM 545
LCKVR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ T KI DFIKFD+GNLCM
Sbjct: 123 LCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCM 182
Query: 546 ITGGRNLGRVGTIVSRERHPGSFDIVH 626
+TGG NLGR+G I +RERHPGSFD+VH
Sbjct: 183 VTGGANLGRIGVITNRERHPGSFDVVH 209
>BC100904-1|AAI00905.1| 263|Homo sapiens RPS4X protein protein.
Length = 263
Score = 368 bits (905), Expect = e-101
Identities = 162/207 (78%), Positives = 184/207 (88%)
Frame = +3
Query: 6 RGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVL 185
RGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV
Sbjct: 3 RGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVK 62
Query: 186 KIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYK 365
KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYK
Sbjct: 63 KICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYK 122
Query: 366 LCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCM 545
LCKVR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ T KI DFIKFD+GNLCM
Sbjct: 123 LCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCM 182
Query: 546 ITGGRNLGRVGTIVSRERHPGSFDIVH 626
+TGG NLGR+G I +RERHPGSFD+VH
Sbjct: 183 VTGGANLGRIGVITNRERHPGSFDVVH 209
>BC100903-1|AAI00904.1| 263|Homo sapiens RPS4X protein protein.
Length = 263
Score = 368 bits (905), Expect = e-101
Identities = 162/207 (78%), Positives = 184/207 (88%)
Frame = +3
Query: 6 RGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVL 185
RGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV
Sbjct: 3 RGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVK 62
Query: 186 KIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYK 365
KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYK
Sbjct: 63 KICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYK 122
Query: 366 LCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCM 545
LCKVR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ T KI DFIKFD+GNLCM
Sbjct: 123 LCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCM 182
Query: 546 ITGGRNLGRVGTIVSRERHPGSFDIVH 626
+TGG NLGR+G I +RERHPGSFD+VH
Sbjct: 183 VTGGANLGRIGVITNRERHPGSFDVVH 209
>BC071662-1|AAH71662.1| 263|Homo sapiens ribosomal protein S4,
X-linked protein.
Length = 263
Score = 368 bits (905), Expect = e-101
Identities = 162/207 (78%), Positives = 184/207 (88%)
Frame = +3
Query: 6 RGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVL 185
RGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV
Sbjct: 3 RGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVK 62
Query: 186 KIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYK 365
KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYK
Sbjct: 63 KICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYK 122
Query: 366 LCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCM 545
LCKVR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ T KI DFIKFD+GNLCM
Sbjct: 123 LCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCM 182
Query: 546 ITGGRNLGRVGTIVSRERHPGSFDIVH 626
+TGG NLGR+G I +RERHPGSFD+VH
Sbjct: 183 VTGGANLGRIGVITNRERHPGSFDVVH 209
>BC000472-1|AAH00472.1| 263|Homo sapiens ribosomal protein S4,
X-linked protein.
Length = 263
Score = 368 bits (905), Expect = e-101
Identities = 162/207 (78%), Positives = 184/207 (88%)
Frame = +3
Query: 6 RGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVL 185
RGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV
Sbjct: 3 RGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVK 62
Query: 186 KIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYK 365
KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYK
Sbjct: 63 KICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYK 122
Query: 366 LCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCM 545
LCKVR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ T KI DFIKFD+GNLCM
Sbjct: 123 LCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCM 182
Query: 546 ITGGRNLGRVGTIVSRERHPGSFDIVH 626
+TGG NLGR+G I +RERHPGSFD+VH
Sbjct: 183 VTGGANLGRIGVITNRERHPGSFDVVH 209
>AF041428-1|AAB96968.1| 263|Homo sapiens ribosomal protein s4 X
isoform protein.
Length = 263
Score = 368 bits (905), Expect = e-101
Identities = 162/207 (78%), Positives = 184/207 (88%)
Frame = +3
Query: 6 RGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVL 185
RGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV
Sbjct: 3 RGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVK 62
Query: 186 KIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYK 365
KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYK
Sbjct: 63 KICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYK 122
Query: 366 LCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCM 545
LCKVR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ T KI DFIKFD+GNLCM
Sbjct: 123 LCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCM 182
Query: 546 ITGGRNLGRVGTIVSRERHPGSFDIVH 626
+TGG NLGR+G I +RERHPGSFD+VH
Sbjct: 183 VTGGANLGRIGVITNRERHPGSFDVVH 209
>AK222479-1|BAD96199.1| 263|Homo sapiens ribosomal protein S4,
X-linked X isoform variant protein.
Length = 263
Score = 366 bits (900), Expect = e-101
Identities = 161/207 (77%), Positives = 183/207 (88%)
Frame = +3
Query: 6 RGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVL 185
RGPKKHLKR+ APK WMLDKL GV+AP PSTGPHKLRECLPL+IFLRNRLKYALTG+EV
Sbjct: 3 RGPKKHLKRVAAPKHWMLDKLTGVFAPHPSTGPHKLRECLPLIIFLRNRLKYALTGDEVK 62
Query: 186 KIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYK 365
KI QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYK
Sbjct: 63 KICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYK 122
Query: 366 LCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCM 545
LCKVR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ T KI DFIKFD+GNLCM
Sbjct: 123 LCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCM 182
Query: 546 ITGGRNLGRVGTIVSRERHPGSFDIVH 626
+TGG NLGR+G I +RERHPGSFD+VH
Sbjct: 183 VTGGANLGRIGVITNRERHPGSFDVVH 209
>M58459-1|AAA63256.1| 263|Homo sapiens ribosomal protein S4Y
isoform protein.
Length = 263
Score = 359 bits (884), Expect = 3e-99
Identities = 158/207 (76%), Positives = 182/207 (87%)
Frame = +3
Query: 6 RGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVL 185
RGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+EV
Sbjct: 3 RGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVK 62
Query: 186 KIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYK 365
KI QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYK
Sbjct: 63 KICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYK 122
Query: 366 LCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCM 545
LCKVR++ G K +P+LVTHD RT+RYPDP+IKVND+VQ+D+ T KI++FIKFD+GNLCM
Sbjct: 123 LCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCM 182
Query: 546 ITGGRNLGRVGTIVSRERHPGSFDIVH 626
+ GG NLGRVG I +RERHPGSFD+VH
Sbjct: 183 VIGGANLGRVGVITNRERHPGSFDVVH 209
>BC100906-1|AAI00907.1| 262|Homo sapiens RPS4Y1 protein protein.
Length = 262
Score = 359 bits (884), Expect = 3e-99
Identities = 158/207 (76%), Positives = 182/207 (87%)
Frame = +3
Query: 6 RGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVL 185
RGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+EV
Sbjct: 2 RGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVK 61
Query: 186 KIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYK 365
KI QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYK
Sbjct: 62 KICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYK 121
Query: 366 LCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCM 545
LCKVR++ G K +P+LVTHD RT+RYPDP+IKVND+VQ+D+ T KI++FIKFD+GNLCM
Sbjct: 122 LCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCM 181
Query: 546 ITGGRNLGRVGTIVSRERHPGSFDIVH 626
+ GG NLGRVG I +RERHPGSFD+VH
Sbjct: 182 VIGGANLGRVGVITNRERHPGSFDVVH 208
>BC100905-1|AAI00906.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 protein.
Length = 263
Score = 359 bits (884), Expect = 3e-99
Identities = 158/207 (76%), Positives = 182/207 (87%)
Frame = +3
Query: 6 RGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVL 185
RGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+EV
Sbjct: 3 RGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVK 62
Query: 186 KIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYK 365
KI QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYK
Sbjct: 63 KICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYK 122
Query: 366 LCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCM 545
LCKVR++ G K +P+LVTHD RT+RYPDP+IKVND+VQ+D+ T KI++FIKFD+GNLCM
Sbjct: 123 LCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCM 182
Query: 546 ITGGRNLGRVGTIVSRERHPGSFDIVH 626
+ GG NLGRVG I +RERHPGSFD+VH
Sbjct: 183 VIGGANLGRVGVITNRERHPGSFDVVH 209
>BC010286-1|AAH10286.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 protein.
Length = 263
Score = 359 bits (884), Expect = 3e-99
Identities = 158/207 (76%), Positives = 182/207 (87%)
Frame = +3
Query: 6 RGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVL 185
RGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+EV
Sbjct: 3 RGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVK 62
Query: 186 KIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYK 365
KI QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYK
Sbjct: 63 KICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYK 122
Query: 366 LCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCM 545
LCKVR++ G K +P+LVTHD RT+RYPDP+IKVND+VQ+D+ T KI++FIKFD+GNLCM
Sbjct: 123 LCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCM 182
Query: 546 ITGGRNLGRVGTIVSRERHPGSFDIVH 626
+ GG NLGRVG I +RERHPGSFD+VH
Sbjct: 183 VIGGANLGRVGVITNRERHPGSFDVVH 209
>AF041427-1|AAB96967.1| 263|Homo sapiens ribosomal protein s4 Y
isoform protein.
Length = 263
Score = 359 bits (884), Expect = 3e-99
Identities = 158/207 (76%), Positives = 182/207 (87%)
Frame = +3
Query: 6 RGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVL 185
RGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+EV
Sbjct: 3 RGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVK 62
Query: 186 KIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYK 365
KI QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYK
Sbjct: 63 KICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYK 122
Query: 366 LCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCM 545
LCKVR++ G K +P+LVTHD RT+RYPDP+IKVND+VQ+D+ T KI++FIKFD+GNLCM
Sbjct: 123 LCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCM 182
Query: 546 ITGGRNLGRVGTIVSRERHPGSFDIVH 626
+ GG NLGRVG I +RERHPGSFD+VH
Sbjct: 183 VIGGANLGRVGVITNRERHPGSFDVVH 209
>AK222594-1|BAD96314.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 Y isoform variant protein.
Length = 263
Score = 357 bits (877), Expect = 2e-98
Identities = 157/207 (75%), Positives = 181/207 (87%)
Frame = +3
Query: 6 RGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVL 185
RGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+EV
Sbjct: 3 RGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVK 62
Query: 186 KIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYK 365
KI QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYK
Sbjct: 63 KICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYK 122
Query: 366 LCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCM 545
LCKVR++ G K +P+LVTHD RT+RYPDP+IKVND+VQ+D+ T KI++FIKFD+GNLCM
Sbjct: 123 LCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCM 182
Query: 546 ITGGRNLGRVGTIVSRERHPGSFDIVH 626
+ GG NLGRVG I +RERHPGSF +VH
Sbjct: 183 VIGGANLGRVGVITNRERHPGSFGVVH 209
>AF497481-1|AAM18074.1| 263|Homo sapiens ribosomal protein S4
protein.
Length = 263
Score = 343 bits (843), Expect = 3e-94
Identities = 151/207 (72%), Positives = 176/207 (85%)
Frame = +3
Query: 6 RGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVL 185
RGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+EV
Sbjct: 3 RGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVK 62
Query: 186 KIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYK 365
KI Q +K+DGKVR D TYPAGF+DV+SIEKT E FRL+Y+ KG F +HRIT EEAKYK
Sbjct: 63 KICMQHFLKIDGKVRVDITYPAGFIDVISIEKTGEHFRLVYNTKGCFAVHRITVEEAKYK 122
Query: 366 LCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCM 545
LCKVR++ G K +P+LVTHD RT+RYPDPLIKVND+VQ+D+ T KI FIKFD+GN+CM
Sbjct: 123 LCKVRKITVGTKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGKITSFIKFDTGNVCM 182
Query: 546 ITGGRNLGRVGTIVSRERHPGSFDIVH 626
+ G NLGRVG I +RERHPGS D+VH
Sbjct: 183 VIAGANLGRVGVITNRERHPGSCDVVH 209
>BC007308-1|AAH07308.2| 243|Homo sapiens RPS4X protein protein.
Length = 243
Score = 334 bits (822), Expect = 1e-91
Identities = 147/189 (77%), Positives = 168/189 (88%)
Frame = +3
Query: 60 DKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDP 239
DKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI QR IK+DGKVRTD
Sbjct: 1 DKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDI 60
Query: 240 TYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVRRVATGPKSVPYLV 419
TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKVR++ G K +P+LV
Sbjct: 61 TYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLV 120
Query: 420 THDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMITGGRNLGRVGTIVSRER 599
THD RT+RYPDPLIKVND++Q+D+ T KI DFIKFD+GNLCM+TGG NLGR+G I +RER
Sbjct: 121 THDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRER 180
Query: 600 HPGSFDIVH 626
HPGSFD+VH
Sbjct: 181 HPGSFDVVH 189
>M22146-1|AAA36597.1| 244|Homo sapiens protein ( Human scar protein
mRNA, complete cds. ).
Length = 244
Score = 332 bits (815), Expect = 8e-91
Identities = 148/191 (77%), Positives = 169/191 (88%)
Frame = +3
Query: 54 MLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRT 233
MLDKL GV+APRPS GPHKLRECLPL+IFLRNRLKYALTG+EV KI QR IK+DGKVRT
Sbjct: 1 MLDKLTGVFAPRPS-GPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 59
Query: 234 DPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVRRVATGPKSVPY 413
D TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKVR++ G K +P+
Sbjct: 60 DITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPH 119
Query: 414 LVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMITGGRNLGRVGTIVSR 593
LVTHD RT+RYPDPLIKVND++Q+D+ T KI DFIKFD+GNLCM+TGG NLGR+G I +R
Sbjct: 120 LVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 179
Query: 594 ERHPGSFDIVH 626
ERHPGSFD+VH
Sbjct: 180 ERHPGSFDVVH 190
>Z70767-1|CAA94808.1| 59|Homo sapiens ribosomal protein S4
protein.
Length = 59
Score = 109 bits (262), Expect = 8e-24
Identities = 48/54 (88%), Positives = 51/54 (94%)
Frame = +3
Query: 6 RGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYAL 167
RGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYAL
Sbjct: 3 RGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYAL 56
>BC064028-1|AAH64028.1| 237|Homo sapiens immediate early response
5-like protein.
Length = 237
Score = 33.5 bits (73), Expect = 0.63
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +2
Query: 470 RLGAARHLHQQDHGLHQVRLRQPLHDHR 553
R AARH Q H LHQ+ L+Q LH H+
Sbjct: 103 RESAARHQLHQLHQLHQLHLQQQLHQHQ 130
>AL158151-18|CAI12875.1| 404|Homo sapiens immediate early response
5-like protein.
Length = 404
Score = 32.7 bits (71), Expect = 1.1
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +2
Query: 479 AARHLHQQDHGLHQVRLRQPLHDHR 553
AARH Q H LHQ+ L+Q LH H+
Sbjct: 106 AARHQLHQLHQLHQLHLQQQLHQHQ 130
>U14518-1|AAA57416.1| 140|Homo sapiens centromere protein-A
protein.
Length = 140
Score = 31.9 bits (69), Expect = 1.9
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +2
Query: 374 GAARRDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQ 502
G RR R E P + P PGP+ +G LGA+ H H +
Sbjct: 2 GPRRRSRKPE--APRRRSPSPTPTPGPSRRGPSLGASSHQHSR 42
>BT007246-1|AAP35910.1| 140|Homo sapiens centromere protein A,
17kDa protein.
Length = 140
Score = 31.9 bits (69), Expect = 1.9
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +2
Query: 374 GAARRDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQ 502
G RR R E P + P PGP+ +G LGA+ H H +
Sbjct: 2 GPRRRSRKPE--APRRRSPSPTPTPGPSRRGPSLGASSHQHSR 42
>BC002703-1|AAH02703.1| 140|Homo sapiens CENPA protein protein.
Length = 140
Score = 31.9 bits (69), Expect = 1.9
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +2
Query: 374 GAARRDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQ 502
G RR R E P + P PGP+ +G LGA+ H H +
Sbjct: 2 GPRRRSRKPE--APRRRSPSPTPTPGPSRRGPSLGASSHQHSR 42
>BC000881-1|AAH00881.1| 114|Homo sapiens centromere protein A
protein.
Length = 114
Score = 31.9 bits (69), Expect = 1.9
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +2
Query: 374 GAARRDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQ 502
G RR R E P + P PGP+ +G LGA+ H H +
Sbjct: 2 GPRRRSRKPE--APRRRSPSPTPTPGPSRRGPSLGASSHQHSR 42
>AY358764-1|AAQ89124.1| 182|Homo sapiens EPQL1862 protein.
Length = 182
Score = 31.9 bits (69), Expect = 1.9
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +3
Query: 240 TYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVRRV 386
+YPA + D I + E+FRL+ + + RI + K C + RV
Sbjct: 96 SYPANYSDDSKIWRPVEIFRLVSKYQNEISDRRICASASAPKTCSIERV 144
>AK096970-1|BAC04915.1| 485|Homo sapiens protein ( Homo sapiens
cDNA FLJ39651 fis, clone SMINT2005161, highly similar to
Mus musculus ES18 mRNA. ).
Length = 485
Score = 31.9 bits (69), Expect = 1.9
Identities = 17/34 (50%), Positives = 17/34 (50%)
Frame = +2
Query: 386 RDRPQERAVPGDARRAHAPVPGPAHQGERLGAAR 487
RDR AV G RRA PVP H G LG R
Sbjct: 142 RDRQWLEAVFGTPRRAGCPVPQRTHAGPSLGEVR 175
>AC011740-3|AAX93267.1| 140|Homo sapiens unknown protein.
Length = 140
Score = 31.9 bits (69), Expect = 1.9
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +2
Query: 374 GAARRDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQ 502
G RR R E P + P PGP+ +G LGA+ H H +
Sbjct: 2 GPRRRSRKPE--APRRRSPSPTPTPGPSRRGPSLGASSHQHSR 42
>BC046248-1|AAH46248.1| 503|Homo sapiens similar to CG32656-PA
protein.
Length = 503
Score = 30.7 bits (66), Expect = 4.4
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = +2
Query: 350 RSQVQAVQGAARRDRPQERAVPGDARRAHAPVPGPAHQG 466
R ++ G ARR R +VPG ARR PGPA +G
Sbjct: 257 RLSPESAPGPARRGRA---SVPGPARRGCDSAPGPARRG 292
>AK125035-1|BAC86028.1| 1253|Homo sapiens protein ( Homo sapiens
cDNA FLJ43045 fis, clone BRTHA3003490. ).
Length = 1253
Score = 30.7 bits (66), Expect = 4.4
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Frame = +3
Query: 81 APRPSTGPHKLRECLPL----VIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYP 248
A +P P +E PL + +++Y L E+ KQRLIK D +++T + P
Sbjct: 12 ASKPKVPPKSEKENDPLRTPEALPEEKKIEYRLLKEEIANREKQRLIKSD-QLKTSSSSP 70
Query: 249 AGF-MDVVSIEKTNELFRLIYDVKGRFTIHRI 341
A +++ I + + + + D + + HRI
Sbjct: 71 ANSDVEIDGIGRIAMVTKQVTDAESKLKKHRI 102
>AK024165-1|BAB14843.1| 182|Homo sapiens protein ( Homo sapiens
cDNA FLJ14103 fis, clone MAMMA1001073. ).
Length = 182
Score = 30.7 bits (66), Expect = 4.4
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = +3
Query: 240 TYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVRRV 386
+YPA + D I + E+FRL+ + + +I + K C + RV
Sbjct: 96 SYPANYSDDSKIWRPVEIFRLVSKYQNEISDRKICASASAPKTCSIERV 144
>AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein.
Length = 1919
Score = 30.7 bits (66), Expect = 4.4
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Frame = +3
Query: 81 APRPSTGPHKLRECLPL----VIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYP 248
A +P P +E PL + +++Y L E+ KQRLIK D +++T + P
Sbjct: 757 ASKPKVPPKSEKENDPLRTPEALPEEKKIEYRLLKEEIANREKQRLIKSD-QLKTSSSSP 815
Query: 249 AGF-MDVVSIEKTNELFRLIYDVKGRFTIHRI 341
A +++ I + + + + D + + HRI
Sbjct: 816 ANSDVEIDGIGRIAMVTKQVTDAESKLKKHRI 847
>U96710-1|AAB81132.1| 351|Homo sapiens 8-oxoguanine DNA-glycosylase
protein.
Length = 351
Score = 30.3 bits (65), Expect = 5.8
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = -1
Query: 127 GKHSRSLWGPVEGRGAYTPPSL 62
G RSLWGP G TPPSL
Sbjct: 300 GNFFRSLWGPYAGWAQATPPSL 321
>AF026691-1|AAB84013.1| 341|Homo sapiens 8-oxoguanine DNA
glycosylase protein.
Length = 341
Score = 30.3 bits (65), Expect = 5.8
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = -1
Query: 127 GKHSRSLWGPVEGRGAYTPPSL 62
G RSLWGP G TPPSL
Sbjct: 290 GNFFRSLWGPYAGWAQATPPSL 311
>AJ301497-1|CAC34202.1| 76|Homo sapiens T-cell receptor beta chain
VJ region protein.
Length = 76
Score = 29.9 bits (64), Expect = 7.7
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 231 TDPTYPAGFM-DVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVRRVATG 395
++ TY +GF+ D I + N F + T+ ++PE++ LC V RV TG
Sbjct: 10 SEATYESGFVIDKFPISRPNLTFSTL-------TVSNMSPEDSSIYLCSVLRVVTG 58
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,327,158
Number of Sequences: 237096
Number of extensions: 2136760
Number of successful extensions: 15134
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 14831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15133
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6804036910
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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