Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_D22
(564 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70308-6|CAA94344.1| 207|Caenorhabditis elegans Hypothetical pr... 58 6e-09
Z73896-3|CAA98060.1| 208|Caenorhabditis elegans Hypothetical pr... 52 2e-07
AC006655-3|AAF39874.1| 208|Caenorhabditis elegans Hypothetical ... 52 2e-07
U42839-2|AAC69015.1| 425|Caenorhabditis elegans Venom-allergen-... 52 4e-07
U42839-1|AAM54195.1| 424|Caenorhabditis elegans Venom-allergen-... 52 4e-07
AF112356-1|AAD27559.1| 425|Caenorhabditis elegans venom allerge... 52 4e-07
Z70308-3|CAA94350.1| 207|Caenorhabditis elegans Hypothetical pr... 51 5e-07
Z70307-2|CAA94335.1| 208|Caenorhabditis elegans Hypothetical pr... 51 5e-07
Z70307-4|CAA94330.1| 209|Caenorhabditis elegans Hypothetical pr... 47 8e-06
Z70308-5|CAA94348.1| 207|Caenorhabditis elegans Hypothetical pr... 46 2e-05
AC006655-2|AAF39876.1| 208|Caenorhabditis elegans Hypothetical ... 45 3e-05
AF016661-5|AAB66052.1| 207|Caenorhabditis elegans Hypothetical ... 45 4e-05
Z68108-4|CAA92136.1| 246|Caenorhabditis elegans Hypothetical pr... 44 8e-05
AF078781-1|AAC26915.2| 258|Caenorhabditis elegans Hypothetical ... 44 1e-04
Z73911-1|CAA98140.1| 262|Caenorhabditis elegans Hypothetical pr... 42 2e-04
Z70308-1|CAA94351.1| 213|Caenorhabditis elegans Hypothetical pr... 42 3e-04
Z70307-5|CAA94331.1| 209|Caenorhabditis elegans Hypothetical pr... 42 3e-04
Z70308-2|CAA94349.1| 212|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z81527-1|CAB04269.3| 290|Caenorhabditis elegans Hypothetical pr... 39 0.002
Z70308-12|CAA94354.1| 211|Caenorhabditis elegans Hypothetical p... 37 0.012
Z70307-17|CAA94341.1| 211|Caenorhabditis elegans Hypothetical p... 37 0.012
Z70307-6|CAA94332.1| 210|Caenorhabditis elegans Hypothetical pr... 34 0.061
U23514-11|AAM48531.1| 287|Caenorhabditis elegans Long protein 1... 33 0.19
U23514-10|AAK95879.1| 301|Caenorhabditis elegans Long protein 1... 33 0.19
U23514-9|AAC46538.1| 312|Caenorhabditis elegans Long protein 1,... 33 0.19
Z70307-1|CAA94334.1| 205|Caenorhabditis elegans Hypothetical pr... 31 0.57
Z78536-1|CAB01715.2| 417|Caenorhabditis elegans Hypothetical pr... 30 1.0
Z74037-3|CAA98491.1| 289|Caenorhabditis elegans Hypothetical pr... 28 4.0
Z77659-1|CAB01164.1| 401|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z81579-9|CAN99688.1| 225|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z73974-8|CAA98274.2| 526|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z73905-7|CAA98112.2| 526|Caenorhabditis elegans Hypothetical pr... 27 9.3
AC024805-13|AAK39335.1| 246|Caenorhabditis elegans Hypothetical... 27 9.3
>Z70308-6|CAA94344.1| 207|Caenorhabditis elegans Hypothetical
protein F49E11.10 protein.
Length = 207
Score = 57.6 bits (133), Expect = 6e-09
Identities = 34/86 (39%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Frame = +3
Query: 276 KNFHNPDKTLGSGRFQTGENLYWYSTTDSTYKLNV--DNAMESWFNEYKDYKYAPLKQSD 449
+N+ N T SG GENLYWY T+ S LN A SW E++DY +
Sbjct: 69 QNYANGCPTGHSGDAGLGENLYWYWTSGSLGDLNQYGSAASASWEKEFQDYGWKS-NLMT 127
Query: 450 FDKSKPKIGHYTQMAWSEYTHVGCAV 527
D IGH TQMAW++ +GC V
Sbjct: 128 IDLFNTGIGHATQMAWAKSNLIGCGV 153
>Z73896-3|CAA98060.1| 208|Caenorhabditis elegans Hypothetical
protein F09E8.5 protein.
Length = 208
Score = 52.4 bits (120), Expect = 2e-07
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Frame = +3
Query: 309 SGRFQTGENLYWYSTTDSTYKLNVDNAMES--WFNEYKDYKYAP--LKQSDFDKSKPKIG 476
S GENLYWY T+ + ++ AM S W E++DY ++ L S F+ +G
Sbjct: 81 SNMIGVGENLYWYWTSGTITNIDQFGAMASAAWEKEFQDYGWSSNTLTMSLFNSG---VG 137
Query: 477 HYTQMAWSEYTHVGCAV 527
H TQMAW++ +GC V
Sbjct: 138 HATQMAWAKTNLIGCGV 154
>AC006655-3|AAF39874.1| 208|Caenorhabditis elegans Hypothetical
protein H10D18.2 protein.
Length = 208
Score = 52.4 bits (120), Expect = 2e-07
Identities = 30/82 (36%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Frame = +3
Query: 327 GENLYWYSTTDSTYKLNVDN--AMESWFNEYKDYKYAPLKQSDFDKSKPKIGHYTQMAWS 500
GENLYW ++ + L+ A SW E++DY + D D IGH TQMAW+
Sbjct: 85 GENLYWSWSSSAPTSLDKFGVAASNSWEKEFQDYGWESTYM-DADLFDSGIGHATQMAWA 143
Query: 501 EYTHVGCAVMQT-QDRQWNKFY 563
E +GC V +D N Y
Sbjct: 144 ETNKIGCGVKNCGKDSSMNNMY 165
>U42839-2|AAC69015.1| 425|Caenorhabditis elegans
Venom-allergen-like protein protein1, isoform a protein.
Length = 425
Score = 51.6 bits (118), Expect = 4e-07
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Frame = +3
Query: 327 GENLYWYSTTDSTYKLNVDNAMESWFNEYKDYKYAP---LKQSDFDKSKPKIGHYTQMAW 497
GENLY S + +++ ++W++E KD+ L Q+ FD+ +GHYTQMAW
Sbjct: 306 GENLYMISINNMPKIQTAEDSSKAWWSELKDFGVGSDNILTQAVFDRG---VGHYTQMAW 362
Query: 498 SEYTHVGCAV 527
T +GC V
Sbjct: 363 EGTTEIGCFV 372
>U42839-1|AAM54195.1| 424|Caenorhabditis elegans
Venom-allergen-like protein protein1, isoform b protein.
Length = 424
Score = 51.6 bits (118), Expect = 4e-07
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Frame = +3
Query: 327 GENLYWYSTTDSTYKLNVDNAMESWFNEYKDYKYAP---LKQSDFDKSKPKIGHYTQMAW 497
GENLY S + +++ ++W++E KD+ L Q+ FD+ +GHYTQMAW
Sbjct: 305 GENLYMISINNMPKIQTAEDSSKAWWSELKDFGVGSDNILTQAVFDRG---VGHYTQMAW 361
Query: 498 SEYTHVGCAV 527
T +GC V
Sbjct: 362 EGTTEIGCFV 371
>AF112356-1|AAD27559.1| 425|Caenorhabditis elegans venom
allergen-like protein protein.
Length = 425
Score = 51.6 bits (118), Expect = 4e-07
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Frame = +3
Query: 327 GENLYWYSTTDSTYKLNVDNAMESWFNEYKDYKYAP---LKQSDFDKSKPKIGHYTQMAW 497
GENLY S + +++ ++W++E KD+ L Q+ FD+ +GHYTQMAW
Sbjct: 306 GENLYMISINNMPKIQTAEDSSKAWWSELKDFGVGSDNILTQAVFDRG---VGHYTQMAW 362
Query: 498 SEYTHVGCAV 527
T +GC V
Sbjct: 363 EGTTEIGCFV 372
>Z70308-3|CAA94350.1| 207|Caenorhabditis elegans Hypothetical
protein F49E11.6 protein.
Length = 207
Score = 51.2 bits (117), Expect = 5e-07
Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Frame = +3
Query: 276 KNFHNPDKTLGSGRFQTGENLYWYSTTDSTYKLNVDN--AMESWFNEYKDYKYAPLKQSD 449
+N+ N T S GENLYWY T+ + L+ A SW +E++ Y + D
Sbjct: 69 QNYANTCPTGHSQGSGYGENLYWYWTSGTIGNLDTFGPAASSSWESEFQQYGWTS-NTLD 127
Query: 450 FDKSKPKIGHYTQMAWSEYTHVGCAV 527
+ IGH TQMAW+ +GC V
Sbjct: 128 MNTFNTGIGHATQMAWANTFAIGCGV 153
>Z70307-2|CAA94335.1| 208|Caenorhabditis elegans Hypothetical
protein C39E9.2 protein.
Length = 208
Score = 51.2 bits (117), Expect = 5e-07
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Frame = +3
Query: 282 FHNPDKTLGSGRFQTGENLYWYSTTDSTYKLNVDNAMES--WFNEYKDYKYAP--LKQSD 449
+ N T SG GENLYWY T+ + ++ A S W E++DY ++ L S
Sbjct: 72 YANKCPTGHSGAAGLGENLYWYWTSATITNIDQFGATGSAAWEKEFQDYGWSSNTLSMSL 131
Query: 450 FDKSKPKIGHYTQMAWSEYTHVGCAV 527
F+ IGH TQMAW++ +GC V
Sbjct: 132 FNTG---IGHATQMAWAKTNLIGCGV 154
>Z70307-4|CAA94330.1| 209|Caenorhabditis elegans Hypothetical
protein C39E9.4 protein.
Length = 209
Score = 47.2 bits (107), Expect = 8e-06
Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Frame = +3
Query: 324 TGENLYWYSTTDSTYKLNVDN--AMESWFNEYKDYKYAP--LKQSDFDKSKPKIGHYTQM 491
TGENLYW +T+ + L++ A SW E++ Y +A Q FD +G+ TQM
Sbjct: 87 TGENLYWRTTSANISGLDIYGGAASVSWEQEFQKYGWATNYFSQELFDTG---VGNGTQM 143
Query: 492 AWSEYTHVGCAV 527
AW++ VGC V
Sbjct: 144 AWAKTNLVGCGV 155
>Z70308-5|CAA94348.1| 207|Caenorhabditis elegans Hypothetical
protein F49E11.9 protein.
Length = 207
Score = 45.6 bits (103), Expect = 2e-05
Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Frame = +3
Query: 276 KNFHNPDKTLGSGRFQTGENLYWYSTTDSTYKLNV--DNAMESWFNEYKDYKYAPLKQSD 449
+N+ N T S GENLYW T+ L+ + A +W E++D+ + D
Sbjct: 67 QNYANTCPTGHSKGTGYGENLYWSWTSADVGSLDSYGEIAAAAWEKEFQDFGWKS-NAMD 125
Query: 450 FDKSKPKIGHYTQMAWSEYTHVGCAV 527
IGH TQMAW+ + +GC V
Sbjct: 126 TTLFNSGIGHATQMAWANTSSIGCGV 151
>AC006655-2|AAF39876.1| 208|Caenorhabditis elegans Hypothetical
protein H10D18.4 protein.
Length = 208
Score = 45.2 bits (102), Expect = 3e-05
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Frame = +3
Query: 327 GENLYWYSTTDSTYKLNVDN--AMESWFNEYKDYKYAP--LKQSDFDKSKPKIGHYTQMA 494
GENLYW ++ + L+ A SW +E++ Y + L ++ F IGH TQMA
Sbjct: 85 GENLYWSWSSSAPSSLDKFGVAASNSWESEFQKYGWTSTFLDEAGFATG---IGHATQMA 141
Query: 495 WSEYTHVGCAV 527
W+E + +GC +
Sbjct: 142 WAETSKIGCGI 152
Score = 27.9 bits (59), Expect = 5.3
Identities = 15/62 (24%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
Frame = +1
Query: 64 LAMVVCIGHVHSKSLLNLSCKQIKDFVNGHNYRRQLLAKGQV----SGHPAATEMKYMVW 231
+ +C+ + + S V+ HN R +A+G + P+A+ M+ +VW
Sbjct: 1 MKFALCLLAIFGCATAQFSSTAQGQIVDAHNKLRSAIAQGSYVAAGTQEPSASNMRKIVW 60
Query: 232 DE 237
DE
Sbjct: 61 DE 62
>AF016661-5|AAB66052.1| 207|Caenorhabditis elegans Hypothetical
protein F02E11.5 protein.
Length = 207
Score = 44.8 bits (101), Expect = 4e-05
Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Frame = +3
Query: 306 GSGRFQTGENLYWYSTTDSTYKLNVD---NAMESWFNEYKDYKYAPLKQSDFDKSKPKIG 476
G G+ + GENLYW + + K D A +W +E++ Y + K D K IG
Sbjct: 79 GHGKSKYGENLYW-RWSGAVIKSIDDYGVRASGAWASEFQKYGWKTNKL-DSALFKTGIG 136
Query: 477 HYTQMAWSEYTHVGCAV 527
H TQMAW+ +GC V
Sbjct: 137 HATQMAWASTGSIGCGV 153
>Z68108-4|CAA92136.1| 246|Caenorhabditis elegans Hypothetical
protein T05A10.5 protein.
Length = 246
Score = 44.0 bits (99), Expect = 8e-05
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Frame = +3
Query: 327 GENLYWYSTTDSTYKLNVDNAMESWFNEYKDYKYA---PLKQSDFDKSKPKIGHYTQMAW 497
G+NLY S ++ + + A+E W+ E +++ L +D IGHYTQMAW
Sbjct: 123 GQNLYMSSFSNPDPRSLIHTAVEKWWQELEEFGTPIDNVLTPELWDLKGKAIGHYTQMAW 182
Query: 498 SEYTHVGCAV 527
+GC +
Sbjct: 183 DRTYRLGCGI 192
>AF078781-1|AAC26915.2| 258|Caenorhabditis elegans Hypothetical
protein B0545.3 protein.
Length = 258
Score = 43.6 bits (98), Expect = 1e-04
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +3
Query: 327 GENLYWYSTTDSTYKLNVDNAMESWFNEYKD-YKYAPLKQSDFDKSKPKIGHYTQMAWSE 503
GEN +++ TTD L+V A+ D A +K + +IGH TQ+ W E
Sbjct: 121 GENAFYFRTTDG---LDVSGAVLKGIQRMGDEIAIAGIKNLKLSRYDSRIGHATQILWKE 177
Query: 504 YTHVGCAVMQTQDRQ 548
+GCAV + RQ
Sbjct: 178 TRKLGCAVQECPARQ 192
>Z73911-1|CAA98140.1| 262|Caenorhabditis elegans Hypothetical
protein T12A7.3 protein.
Length = 262
Score = 42.3 bits (95), Expect = 2e-04
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +3
Query: 327 GENLYWY-STTDSTYKLNVDNAMESWFNEYKDYKYAPLKQSDFDKSKPKIGHYTQMAWSE 503
GENL+W+ ST + A SW E+++ K+ D +GH TQM W++
Sbjct: 139 GENLFWHWSTRPGDFNKYGPMAALSWIKEFRE-KFWDSNILTNDLFGSGVGHATQMVWAD 197
Query: 504 YTHVGCAV 527
+GCAV
Sbjct: 198 TYQMGCAV 205
>Z70308-1|CAA94351.1| 213|Caenorhabditis elegans Hypothetical
protein F49E11.4 protein.
Length = 213
Score = 41.9 bits (94), Expect = 3e-04
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Frame = +3
Query: 324 TGENLYW-YSTTDSTYKLNVDNAMESWFNEYKDYKYAPLKQSDFDKSKPKIGHYTQMAWS 500
TGE+++W +S++ ST + A + W+NE++ + L + + + +IGH QMAW
Sbjct: 87 TGESIFWHFSSSLSTPEQYATLAPQKWWNEFETNGWDSLIYNHASQ-RFQIGHAVQMAWH 145
Query: 501 EYTHVGC 521
+ VGC
Sbjct: 146 TTSKVGC 152
>Z70307-5|CAA94331.1| 209|Caenorhabditis elegans Hypothetical
protein C39E9.5 protein.
Length = 209
Score = 41.9 bits (94), Expect = 3e-04
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Frame = +3
Query: 285 HNPDKTLGSGRFQTGENLYW-YSTTDST-YKLNVDNAMESWFNEYKDYKYAPLKQSDFDK 458
H+PDK+ G ENL+W YS++ T V +A+++W +E++ + + K +
Sbjct: 79 HSPDKSYG-------ENLFWAYSSSPITDLDKYVQSAVDTWVSEFQMFGWNSNKFTTA-L 130
Query: 459 SKPKIGHYTQMAWSEYTHVGC 521
IGH TQ+AWS VGC
Sbjct: 131 WNTGIGHATQVAWSATGQVGC 151
Score = 27.9 bits (59), Expect = 5.3
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Frame = +1
Query: 46 VRALLILAMVVCIGHVHSKSLLNLSCKQIKDFVNGHNYRRQLLAKGQV----SGHPAATE 213
++ L+LA+V C+G H++ + KQ VN HN R +AKG+ + +AT
Sbjct: 1 MQTALVLALV-CVG-AHAQ--FSEGGKQ--SMVNAHNAVRSSIAKGEYVAKGTKKDSATN 54
Query: 214 MKYMVWDEN 240
M M WD +
Sbjct: 55 MLKMKWDNS 63
>Z70308-2|CAA94349.1| 212|Caenorhabditis elegans Hypothetical
protein F49E11.5 protein.
Length = 212
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/88 (23%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Frame = +3
Query: 309 SGRFQTGENLYWYST---TDSTYKLNVDNAMESWFNEYKDYKYAPLKQSDFDKSKPKIGH 479
+ R GEN+YW+++ T + +L + + W +E++ + + ++ + IGH
Sbjct: 85 ASRANIGENMYWWTSPVVTQTDAELLGNRSANLWESEFQRFGWNGNLLTE-ELFNSGIGH 143
Query: 480 YTQMAWSEYTHVGCAVMQTQDRQWNKFY 563
TQMAW+ +GC + + + Y
Sbjct: 144 ATQMAWATTNKIGCGISKCSSDSFGTQY 171
>Z81527-1|CAB04269.3| 290|Caenorhabditis elegans Hypothetical
protein F35E12.1 protein.
Length = 290
Score = 39.1 bits (87), Expect = 0.002
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +3
Query: 327 GENLY--WYSTTDSTYKLNVDNAMESWFNEYKDYKYAPLKQSDFDKSKPKIGHYTQMAWS 500
GEN++ W S + + A ESW E++ + + D K IGH TQM WS
Sbjct: 167 GENMHRSWSSKEITDLDIYGTKAAESWAGEFQKKGWESNIYTK-DTEKSGIGHATQMVWS 225
Query: 501 EYTHVGCAV 527
+ +GC V
Sbjct: 226 QAYLIGCGV 234
>Z70308-12|CAA94354.1| 211|Caenorhabditis elegans Hypothetical
protein F49E11.11 protein.
Length = 211
Score = 36.7 bits (81), Expect = 0.012
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = +3
Query: 327 GENLYWY--STTDSTYKLNVDNAMESWFNEYKDYKYAPLKQSDFDKSKPKIGHYTQMAWS 500
GENLYW S S + A +W E++ Y + + + IGH TQMAW+
Sbjct: 88 GENLYWRWSSLPFSGMDIYGGAASVAWEQEFQQYGWTTNTFTQA-LANTGIGHATQMAWA 146
Query: 501 EYTHVGCAV 527
+GC V
Sbjct: 147 NTGLIGCGV 155
>Z70307-17|CAA94341.1| 211|Caenorhabditis elegans Hypothetical
protein F49E11.11 protein.
Length = 211
Score = 36.7 bits (81), Expect = 0.012
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = +3
Query: 327 GENLYWY--STTDSTYKLNVDNAMESWFNEYKDYKYAPLKQSDFDKSKPKIGHYTQMAWS 500
GENLYW S S + A +W E++ Y + + + IGH TQMAW+
Sbjct: 88 GENLYWRWSSLPFSGMDIYGGAASVAWEQEFQQYGWTTNTFTQA-LANTGIGHATQMAWA 146
Query: 501 EYTHVGCAV 527
+GC V
Sbjct: 147 NTGLIGCGV 155
>Z70307-6|CAA94332.1| 210|Caenorhabditis elegans Hypothetical
protein C39E9.6 protein.
Length = 210
Score = 34.3 bits (75), Expect = 0.061
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +3
Query: 327 GENLYWYSTTDSTYKLNVDN--AMESWFNEYKDYKYAPLKQSDFDKSKPKIGHYTQMAWS 500
GENLYW + D L+ A +W +E++ + + K S + H TQ+AW+
Sbjct: 87 GENLYWEWSGDPFSDLDKFGKIATVAWDHEFEQFGWNSNKFS-LALFNTGVAHATQIAWA 145
Query: 501 EYTHVGCAV 527
+GC V
Sbjct: 146 PTGKIGCGV 154
>U23514-11|AAM48531.1| 287|Caenorhabditis elegans Long protein 1,
isoform c protein.
Length = 287
Score = 32.7 bits (71), Expect = 0.19
Identities = 23/79 (29%), Positives = 35/79 (44%)
Frame = +3
Query: 312 GRFQTGENLYWYSTTDSTYKLNVDNAMESWFNEYKDYKYAPLKQSDFDKSKPKIGHYTQM 491
GR GEN++ + Y N +A+ WFNE + + K GHY Q+
Sbjct: 127 GRINVGENIW-----AAPYS-NYSDAISIWFNEVHNPRCGCNHAY-----KHCCGHYVQV 175
Query: 492 AWSEYTHVGCAVMQTQDRQ 548
W++ VGC + +D Q
Sbjct: 176 VWAKTNLVGCGFSRCRDVQ 194
>U23514-10|AAK95879.1| 301|Caenorhabditis elegans Long protein 1,
isoform b protein.
Length = 301
Score = 32.7 bits (71), Expect = 0.19
Identities = 23/79 (29%), Positives = 35/79 (44%)
Frame = +3
Query: 312 GRFQTGENLYWYSTTDSTYKLNVDNAMESWFNEYKDYKYAPLKQSDFDKSKPKIGHYTQM 491
GR GEN++ + Y N +A+ WFNE + + K GHY Q+
Sbjct: 127 GRINVGENIW-----AAPYS-NYSDAISIWFNEVHNPRCGCNHAY-----KHCCGHYVQV 175
Query: 492 AWSEYTHVGCAVMQTQDRQ 548
W++ VGC + +D Q
Sbjct: 176 VWAKTNLVGCGFSRCRDVQ 194
>U23514-9|AAC46538.1| 312|Caenorhabditis elegans Long protein 1,
isoform a protein.
Length = 312
Score = 32.7 bits (71), Expect = 0.19
Identities = 23/79 (29%), Positives = 35/79 (44%)
Frame = +3
Query: 312 GRFQTGENLYWYSTTDSTYKLNVDNAMESWFNEYKDYKYAPLKQSDFDKSKPKIGHYTQM 491
GR GEN++ + Y N +A+ WFNE + + K GHY Q+
Sbjct: 127 GRINVGENIW-----AAPYS-NYSDAISIWFNEVHNPRCGCNHAY-----KHCCGHYVQV 175
Query: 492 AWSEYTHVGCAVMQTQDRQ 548
W++ VGC + +D Q
Sbjct: 176 VWAKTNLVGCGFSRCRDVQ 194
>Z70307-1|CAA94334.1| 205|Caenorhabditis elegans Hypothetical
protein C39E9.1 protein.
Length = 205
Score = 31.1 bits (67), Expect = 0.57
Identities = 28/88 (31%), Positives = 38/88 (43%), Gaps = 7/88 (7%)
Frame = +3
Query: 285 HNPDKTLGSGRFQTGENLYWYSTTDSTYKLNVDNAMES--WFNEYKDYKYAPLKQSDFD- 455
H P K+L S + GEN+Y+ TT +NV S W E + ++ P D
Sbjct: 71 HMPKKSLES---RVGENIYYRYTTAPFSGMNVYGGAASVAWEQEVQRNEW-PSNIISIDV 126
Query: 456 ----KSKPKIGHYTQMAWSEYTHVGCAV 527
I H TQMAW+ +GC V
Sbjct: 127 LLVTDELRIILHATQMAWATSGQIGCGV 154
>Z78536-1|CAB01715.2| 417|Caenorhabditis elegans Hypothetical
protein C07A4.2 protein.
Length = 417
Score = 30.3 bits (65), Expect = 1.0
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +3
Query: 327 GENLYWYSTTDSTYKLNVDNAM-ESWFNEYKDYKYAPLKQSDFDKSKPKIGHYTQMAWSE 503
GENL+++ + A+ +S++ E Y Y+ + F K+ GH+TQ+ W
Sbjct: 305 GENLFFFGARHLPSPQTLAAAVIQSFYLEGIGYNYSSWRPMSFFKT----GHFTQLIWKN 360
Query: 504 YTHVGCAV 527
+G V
Sbjct: 361 SRKIGVGV 368
>Z74037-3|CAA98491.1| 289|Caenorhabditis elegans Hypothetical
protein F57B7.2 protein.
Length = 289
Score = 28.3 bits (60), Expect = 4.0
Identities = 17/68 (25%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Frame = +3
Query: 327 GENLYWYSTTDSTYKLNVDNAMESWFNEYKDYKYAPLKQSDFDKSK--PKIGHYTQMAWS 500
GENL + ++ ++ W E + + DFDK + PK ++Q+ W
Sbjct: 165 GENLILKEANEQSHLPTGQEVIQEWEKEAQFF--------DFDKPRWNPKCQRFSQVVWK 216
Query: 501 EYTHVGCA 524
+ T +G A
Sbjct: 217 DTTELGAA 224
>Z77659-1|CAB01164.1| 401|Caenorhabditis elegans Hypothetical
protein F23B12.1 protein.
Length = 401
Score = 27.9 bits (59), Expect = 5.3
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -2
Query: 191 DT*PLASNCLL*LCPLTKSLICLHDKFSRDLL 96
D LA NC+ ++K +IC+H S DL+
Sbjct: 217 DAFQLAFNCMPLCAVVSKKIICMHGGISEDLI 248
>Z81579-9|CAN99688.1| 225|Caenorhabditis elegans Hypothetical
protein R13H4.2a protein.
Length = 225
Score = 27.5 bits (58), Expect = 7.0
Identities = 16/51 (31%), Positives = 21/51 (41%)
Frame = +3
Query: 288 NPDKTLGSGRFQTGENLYWYSTTDSTYKLNVDNAMESWFNEYKDYKYAPLK 440
NP G + T YWY D Y + +S FN Y +Y Y P +
Sbjct: 105 NPYYWNNYGSYWTRYKGYWY---DYDYPSSYRRYTDSAFNRYLNYTYTPYR 152
>Z73974-8|CAA98274.2| 526|Caenorhabditis elegans Hypothetical
protein F29F11.2 protein.
Length = 526
Score = 27.1 bits (57), Expect = 9.3
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -2
Query: 491 HLCVMAYFGFRLVEVTLFQGSIFVIFIFIKPTLHSV 384
H M++F F ++++ LF + F IF+ I L V
Sbjct: 478 HYRKMSFFSFFMIDIILFLTATFAIFVSISLYLFRV 513
>Z73905-7|CAA98112.2| 526|Caenorhabditis elegans Hypothetical
protein F29F11.2 protein.
Length = 526
Score = 27.1 bits (57), Expect = 9.3
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -2
Query: 491 HLCVMAYFGFRLVEVTLFQGSIFVIFIFIKPTLHSV 384
H M++F F ++++ LF + F IF+ I L V
Sbjct: 478 HYRKMSFFSFFMIDIILFLTATFAIFVSISLYLFRV 513
>AC024805-13|AAK39335.1| 246|Caenorhabditis elegans Hypothetical
protein Y51H7C.2 protein.
Length = 246
Score = 27.1 bits (57), Expect = 9.3
Identities = 15/51 (29%), Positives = 22/51 (43%)
Frame = +3
Query: 387 AMESWFNEYKDYKYAPLKQSDFDKSKPKIGHYTQMAWSEYTHVGCAVMQTQ 539
A ++W +EY + SD + +GH M W +VGC V Q
Sbjct: 110 AAKAWSSEYTKKGWETDVMSD-EFFNSGVGHAIIMTWYSQVNVGCGVKLCQ 159
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,269,916
Number of Sequences: 27780
Number of extensions: 273195
Number of successful extensions: 704
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 692
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1166125180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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