Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_D19
(319 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M86737-1|AAA58660.1| 709|Homo sapiens high mobility group box p... 46 2e-05
BC091486-1|AAH91486.1| 633|Homo sapiens SSRP1 protein protein. 46 2e-05
BC005116-1|AAH05116.1| 709|Homo sapiens structure specific reco... 46 2e-05
Z95115-3|CAB62951.1| 211|Homo sapiens high-mobility group (nonh... 39 0.003
Z17240-1|CAA78938.1| 186|Homo sapiens HMG2B protein. 39 0.004
X62534-1|CAA44395.1| 209|Homo sapiens HMG-2 protein. 39 0.004
X12597-1|CAA31110.1| 215|Homo sapiens protein ( Human mRNA for ... 39 0.004
U51677-1|AAB08987.1| 215|Homo sapiens non-histone chromatin pro... 39 0.004
M83665-1|AAA58659.1| 209|Homo sapiens high mobility group 2 pro... 39 0.004
L08048-1|AAA64970.1| 216|Homo sapiens HMG-1 protein. 39 0.004
EU012027-1|ABS29271.1| 215|Homo sapiens high-mobility group box... 39 0.004
EF157968-1|ABM47301.1| 215|Homo sapiens high mobility group box... 39 0.004
D63874-1|BAA09924.1| 215|Homo sapiens HMG-1 protein. 39 0.004
CR456863-1|CAG33144.1| 215|Homo sapiens HMGB1 protein. 39 0.004
BT020159-1|AAV38961.1| 215|Homo sapiens high-mobility group box... 39 0.004
BT019783-1|AAV38586.1| 208|Homo sapiens high-mobility group box... 39 0.004
BT019782-1|AAV38585.1| 209|Homo sapiens high-mobility group box... 39 0.004
BT006940-1|AAP35586.1| 215|Homo sapiens high-mobility group box... 39 0.004
BC141844-1|AAI41845.1| 215|Homo sapiens high-mobility group box... 39 0.004
BC100019-1|AAI00020.1| 209|Homo sapiens HMGB2 protein protein. 39 0.004
BC067732-1|AAH67732.1| 215|Homo sapiens high-mobility group box... 39 0.004
BC066889-1|AAH66889.1| 215|Homo sapiens high-mobility group box... 39 0.004
BC030981-1|AAH30981.1| 215|Homo sapiens high-mobility group box... 39 0.004
BC003378-1|AAH03378.1| 215|Homo sapiens high-mobility group box... 39 0.004
BC001063-1|AAH01063.1| 209|Homo sapiens high-mobility group box... 39 0.004
AY377859-1|AAQ91389.1| 215|Homo sapiens high mobility group pro... 39 0.004
AL353648-3|CAI15603.1| 158|Homo sapiens high-mobility group box... 39 0.004
AL353648-2|CAI15601.1| 162|Homo sapiens high-mobility group box... 39 0.004
AL353648-1|CAI15600.1| 215|Homo sapiens high-mobility group box... 39 0.004
AB208998-1|BAD92235.1| 176|Homo sapiens high-mobility group box... 39 0.004
Y10043-1|CAA71143.1| 200|Homo sapiens high mobility group prote... 38 0.005
BC103851-1|AAI03852.1| 130|Homo sapiens HMG4L protein protein. 38 0.005
BC103850-1|AAI03851.1| 130|Homo sapiens HMG4L protein protein. 38 0.005
BC103849-1|AAI03850.1| 130|Homo sapiens HMG4L protein protein. 38 0.005
BC070482-1|AAH70482.1| 200|Homo sapiens HMGB3 protein protein. 38 0.005
AC007277-1|AAF19244.1| 191|Homo sapiens WUGSC:H_NH0244E06.1 pro... 36 0.020
U23752-1|AAB08518.1| 441|Homo sapiens SOX-11 protein. 33 0.24
BC025789-1|AAH25789.1| 173|Homo sapiens Unknown (protein for IM... 33 0.24
AC108025-1|AAX88930.1| 441|Homo sapiens unknown protein. 33 0.24
AB028641-1|BAA88122.1| 441|Homo sapiens SOX11 protein. 33 0.24
L79988-1|AAL77438.1| 403|Homo sapiens nuclear autoantigen protein. 32 0.32
BT007176-1|AAP35840.1| 411|Homo sapiens SWI/SNF related, matrix... 32 0.32
BC063700-1|AAH63700.1| 411|Homo sapiens SWI/SNF related, matrix... 32 0.32
BC011017-1|AAH11017.1| 411|Homo sapiens SWI/SNF related, matrix... 32 0.32
BC007082-1|AAH07082.1| 411|Homo sapiens SWI/SNF related, matrix... 32 0.32
AF076675-2|AAF39781.1| 181|Homo sapiens SP100-HMG protein. 32 0.32
AF056322-1|AAC39790.1| 879|Homo sapiens SP100-HMG nuclear autoa... 32 0.32
AF035262-1|AAC04509.1| 411|Homo sapiens BAF57 protein. 32 0.32
AC010149-1|AAY14879.1| 843|Homo sapiens unknown protein. 32 0.32
X70683-1|CAA50018.1| 474|Homo sapiens SOX-4 protein protein. 32 0.42
BC072668-1|AAH72668.1| 474|Homo sapiens SOX4 protein protein. 32 0.42
AL136179-1|CAC03595.1| 474|Homo sapiens SRY (sex determining re... 32 0.42
CR456504-1|CAG30390.1| 601|Homo sapiens HMG2L1 protein. 31 0.74
BC104756-1|AAI04757.1| 492|Homo sapiens HMG2L1 protein protein. 31 0.74
BC104754-1|AAI04755.1| 492|Homo sapiens HMG2L1 protein protein. 31 0.74
AL079310-1|CAB45240.1| 492|Homo sapiens hypothetical protein pr... 31 0.74
AL008635-1|CAI21632.1| 601|Homo sapiens high-mobility group pro... 31 0.74
AJ010069-1|CAA08991.1| 196|Homo sapiens HMGBCG protein protein. 31 0.74
DQ207367-1|ABB22048.1| 186|Homo sapiens HMG2-like protein protein. 30 1.3
BC070148-1|AAH70148.1| 112|Homo sapiens high-mobility group box... 30 1.3
BC021180-1|AAH21180.1| 186|Homo sapiens high-mobility group box... 30 1.3
X73038-1|CAA51519.1| 59|Homo sapiens SOX-11 protein. 29 4.0
BC021574-1|AAH21574.1| 346|Homo sapiens glucose 6 phosphatase, ... 29 4.0
BC002494-1|AAH02494.2| 346|Homo sapiens glucose 6 phosphatase, ... 29 4.0
Y13436-1|CAA73847.1| 387|Homo sapiens Sry-related Box 1 protein... 28 5.2
X56687-1|CAA40016.1| 727|Homo sapiens autoantigen NOR-90 protein. 28 5.2
X53461-1|CAA37548.1| 764|Homo sapiens protein ( Human mRNA for ... 28 5.2
X53390-1|CAA37469.1| 764|Homo sapiens protein ( Human mRNA for ... 28 5.2
U65487-1|AAC51239.1| 654|Homo sapiens ribosomal RNA upstream bi... 28 5.2
BC042297-1|AAH42297.1| 727|Homo sapiens upstream binding transc... 28 5.2
AL138691-1|CAH72340.1| 391|Homo sapiens SRY (sex determining re... 28 5.2
X65661-1|CAA46612.1| 54|Homo sapiens SOX-4 protein. 28 6.9
M62810-1|AAA59849.1| 246|Homo sapiens mitochondrial transcripti... 28 6.9
CR407653-1|CAG28581.1| 246|Homo sapiens TFAM protein. 28 6.9
BT019659-1|AAV38465.1| 246|Homo sapiens transcription factor A,... 28 6.9
BT019658-1|AAV38464.1| 246|Homo sapiens transcription factor A,... 28 6.9
BC126366-1|AAI26367.1| 246|Homo sapiens transcription factor A,... 28 6.9
BC018628-1|AAH18628.1| 99|Homo sapiens Unknown (protein for IM... 28 6.9
AL137061-1|CAI14398.1| 276|Homo sapiens SRY (sex determining re... 28 6.9
AF107044-1|AAC95381.1| 276|Homo sapiens DNA-binding protein SOX... 28 6.9
Z31560-1|CAA83435.1| 321|Homo sapiens sox-2 protein. 27 9.1
X96421-1|CAA65281.1| 204|Homo sapiens SRY protein. 27 9.1
X53772-1|CAA37790.1| 204|Homo sapiens SRY protein. 27 9.1
S53156-1|AAB25008.1| 141|Homo sapiens testis-determining factor... 27 9.1
L10102-1|AAA60591.1| 204|Homo sapiens sex-determining region Y ... 27 9.1
L10101-1|AAA60590.1| 204|Homo sapiens sex-determining region Y ... 27 9.1
L08063-1|AAA16878.1| 204|Homo sapiens sex determination protein... 27 9.1
L07335-1|AAA35997.1| 327|Homo sapiens protein ( Homo sapiens (c... 27 9.1
DQ086141-1|AAY88212.1| 198|Homo sapiens SRY protein. 27 9.1
DQ086140-1|AAY88211.1| 198|Homo sapiens SRY protein. 27 9.1
BC074924-1|AAH74924.1| 204|Homo sapiens sex determining region ... 27 9.1
BC074923-1|AAH74923.1| 204|Homo sapiens sex determining region ... 27 9.1
BC013923-1|AAH13923.1| 317|Homo sapiens SRY (sex determining re... 27 9.1
AY998490-1|AAX93513.1| 198|Homo sapiens SRY protein protein. 27 9.1
AY998489-1|AAX93512.1| 198|Homo sapiens SRY protein protein. 27 9.1
AY998488-1|AAX93511.1| 198|Homo sapiens SRY protein protein. 27 9.1
AY998487-1|AAY15122.1| 166|Homo sapiens mutant SRY protein prot... 27 9.1
AY998485-1|AAY15120.1| 179|Homo sapiens mutant SRY protein prot... 27 9.1
AY998484-1|AAY15119.1| 179|Homo sapiens mutant SRY protein prot... 27 9.1
AY608625-1|AAT37461.1| 198|Homo sapiens SRY protein. 27 9.1
AY601860-1|AAT39019.1| 198|Homo sapiens sex-determining region ... 27 9.1
AY601859-1|AAT39018.1| 198|Homo sapiens sex-determining region ... 27 9.1
AY601858-1|AAT39017.1| 198|Homo sapiens sex-determining region ... 27 9.1
AY601857-1|AAT39016.1| 198|Homo sapiens sex-determining region ... 27 9.1
AY601856-1|AAT39015.1| 198|Homo sapiens sex-determining region ... 27 9.1
AY601855-1|AAT39014.1| 198|Homo sapiens sex-determining region ... 27 9.1
AY601854-1|AAT39013.1| 198|Homo sapiens sex-determining region ... 27 9.1
AY601853-1|AAT39012.1| 198|Homo sapiens sex-determining region ... 27 9.1
AY601852-1|AAT39011.1| 198|Homo sapiens sex-determining region ... 27 9.1
AY573238-1|AAS79428.1| 198|Homo sapiens SRY protein protein. 27 9.1
AY330304-1|AAP88269.1| 113|Homo sapiens SRY protein. 27 9.1
AY330303-1|AAP88268.1| 106|Homo sapiens SRY protein. 27 9.1
>M86737-1|AAA58660.1| 709|Homo sapiens high mobility group box
protein.
Length = 709
Score = 46.4 bits (105), Expect = 2e-05
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = +3
Query: 84 ERPMSPICCGSTVQKQ-IKSEHPGLKVTEIAKKGGEMWKSMKDNK 215
+RPMS ++ IKS+HPG+ +T+++KK GE+WK M K
Sbjct: 548 KRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEK 592
>BC091486-1|AAH91486.1| 633|Homo sapiens SSRP1 protein protein.
Length = 633
Score = 46.4 bits (105), Expect = 2e-05
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = +3
Query: 84 ERPMSPICCGSTVQKQ-IKSEHPGLKVTEIAKKGGEMWKSMKDNK 215
+RPMS ++ IKS+HPG+ +T+++KK GE+WK M K
Sbjct: 548 KRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEK 592
>BC005116-1|AAH05116.1| 709|Homo sapiens structure specific
recognition protein 1 protein.
Length = 709
Score = 46.4 bits (105), Expect = 2e-05
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = +3
Query: 84 ERPMSPICCGSTVQKQ-IKSEHPGLKVTEIAKKGGEMWKSMKDNK 215
+RPMS ++ IKS+HPG+ +T+++KK GE+WK M K
Sbjct: 548 KRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEK 592
>Z95115-3|CAB62951.1| 211|Homo sapiens high-mobility group
(nonhistone chromosomal) protein 1-like 10 protein.
Length = 211
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +3
Query: 114 STVQKQIKSEHPGLKVTEIAKKGGEMWKS 200
S + +IK EHPGL + ++AKK GEMW +
Sbjct: 107 SAYRPKIKGEHPGLSIGDVAKKLGEMWNN 135
>Z17240-1|CAA78938.1| 186|Homo sapiens HMG2B protein.
Length = 186
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/31 (58%), Positives = 23/31 (74%), Gaps = 2/31 (6%)
Frame = +3
Query: 129 QIKSEHPGLKVTEIAKKGGEMW--KSMKDNK 215
+IKSEHPGL + + AKK GEMW +S KD +
Sbjct: 89 KIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQ 119
>X62534-1|CAA44395.1| 209|Homo sapiens HMG-2 protein.
Length = 209
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/31 (58%), Positives = 23/31 (74%), Gaps = 2/31 (6%)
Frame = +3
Query: 129 QIKSEHPGLKVTEIAKKGGEMW--KSMKDNK 215
+IKSEHPGL + + AKK GEMW +S KD +
Sbjct: 112 KIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQ 142
>X12597-1|CAA31110.1| 215|Homo sapiens protein ( Human mRNA for
high mobility group-1 protein (HMG-1). ).
Length = 215
Score = 38.7 bits (86), Expect = 0.004
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +3
Query: 114 STVQKQIKSEHPGLKVTEIAKKGGEMWKS 200
S + +IK EHPGL + ++AKK GEMW +
Sbjct: 107 SEYRPKIKGEHPGLSIGDVAKKLGEMWNN 135
>U51677-1|AAB08987.1| 215|Homo sapiens non-histone chromatin
protein HMG1 protein.
Length = 215
Score = 38.7 bits (86), Expect = 0.004
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +3
Query: 114 STVQKQIKSEHPGLKVTEIAKKGGEMWKS 200
S + +IK EHPGL + ++AKK GEMW +
Sbjct: 107 SEYRPKIKGEHPGLSIGDVAKKLGEMWNN 135
>M83665-1|AAA58659.1| 209|Homo sapiens high mobility group 2
protein protein.
Length = 209
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/31 (58%), Positives = 23/31 (74%), Gaps = 2/31 (6%)
Frame = +3
Query: 129 QIKSEHPGLKVTEIAKKGGEMW--KSMKDNK 215
+IKSEHPGL + + AKK GEMW +S KD +
Sbjct: 112 KIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQ 142
>L08048-1|AAA64970.1| 216|Homo sapiens HMG-1 protein.
Length = 216
Score = 38.7 bits (86), Expect = 0.004
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +3
Query: 114 STVQKQIKSEHPGLKVTEIAKKGGEMWKS 200
S + +IK EHPGL + ++AKK GEMW +
Sbjct: 107 SEYRPKIKGEHPGLSIGDVAKKLGEMWNN 135
>EU012027-1|ABS29271.1| 215|Homo sapiens high-mobility group box 1
protein.
Length = 215
Score = 38.7 bits (86), Expect = 0.004
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +3
Query: 114 STVQKQIKSEHPGLKVTEIAKKGGEMWKS 200
S + +IK EHPGL + ++AKK GEMW +
Sbjct: 107 SEYRPKIKGEHPGLSIGDVAKKLGEMWNN 135
>EF157968-1|ABM47301.1| 215|Homo sapiens high mobility group box 1
protein protein.
Length = 215
Score = 38.7 bits (86), Expect = 0.004
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +3
Query: 114 STVQKQIKSEHPGLKVTEIAKKGGEMWKS 200
S + +IK EHPGL + ++AKK GEMW +
Sbjct: 107 SEYRPKIKGEHPGLSIGDVAKKLGEMWNN 135
>D63874-1|BAA09924.1| 215|Homo sapiens HMG-1 protein.
Length = 215
Score = 38.7 bits (86), Expect = 0.004
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +3
Query: 114 STVQKQIKSEHPGLKVTEIAKKGGEMWKS 200
S + +IK EHPGL + ++AKK GEMW +
Sbjct: 107 SEYRPKIKGEHPGLSIGDVAKKLGEMWNN 135
>CR456863-1|CAG33144.1| 215|Homo sapiens HMGB1 protein.
Length = 215
Score = 38.7 bits (86), Expect = 0.004
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +3
Query: 114 STVQKQIKSEHPGLKVTEIAKKGGEMWKS 200
S + +IK EHPGL + ++AKK GEMW +
Sbjct: 107 SEYRPKIKGEHPGLSIGDVAKKLGEMWNN 135
>BT020159-1|AAV38961.1| 215|Homo sapiens high-mobility group box 1
protein.
Length = 215
Score = 38.7 bits (86), Expect = 0.004
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +3
Query: 114 STVQKQIKSEHPGLKVTEIAKKGGEMWKS 200
S + +IK EHPGL + ++AKK GEMW +
Sbjct: 107 SEYRPKIKGEHPGLSIGDVAKKLGEMWNN 135
>BT019783-1|AAV38586.1| 208|Homo sapiens high-mobility group box 2
protein.
Length = 208
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/31 (58%), Positives = 23/31 (74%), Gaps = 2/31 (6%)
Frame = +3
Query: 129 QIKSEHPGLKVTEIAKKGGEMW--KSMKDNK 215
+IKSEHPGL + + AKK GEMW +S KD +
Sbjct: 112 KIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQ 142
>BT019782-1|AAV38585.1| 209|Homo sapiens high-mobility group box 2
protein.
Length = 209
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/31 (58%), Positives = 23/31 (74%), Gaps = 2/31 (6%)
Frame = +3
Query: 129 QIKSEHPGLKVTEIAKKGGEMW--KSMKDNK 215
+IKSEHPGL + + AKK GEMW +S KD +
Sbjct: 112 KIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQ 142
>BT006940-1|AAP35586.1| 215|Homo sapiens high-mobility group box 1
protein.
Length = 215
Score = 38.7 bits (86), Expect = 0.004
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +3
Query: 114 STVQKQIKSEHPGLKVTEIAKKGGEMWKS 200
S + +IK EHPGL + ++AKK GEMW +
Sbjct: 107 SEYRPKIKGEHPGLSIGDVAKKLGEMWNN 135
>BC141844-1|AAI41845.1| 215|Homo sapiens high-mobility group box 1
protein.
Length = 215
Score = 38.7 bits (86), Expect = 0.004
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +3
Query: 114 STVQKQIKSEHPGLKVTEIAKKGGEMWKS 200
S + +IK EHPGL + ++AKK GEMW +
Sbjct: 107 SEYRPKIKGEHPGLSIGDVAKKLGEMWNN 135
>BC100019-1|AAI00020.1| 209|Homo sapiens HMGB2 protein protein.
Length = 209
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/31 (58%), Positives = 23/31 (74%), Gaps = 2/31 (6%)
Frame = +3
Query: 129 QIKSEHPGLKVTEIAKKGGEMW--KSMKDNK 215
+IKSEHPGL + + AKK GEMW +S KD +
Sbjct: 112 KIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQ 142
>BC067732-1|AAH67732.1| 215|Homo sapiens high-mobility group box 1
protein.
Length = 215
Score = 38.7 bits (86), Expect = 0.004
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +3
Query: 114 STVQKQIKSEHPGLKVTEIAKKGGEMWKS 200
S + +IK EHPGL + ++AKK GEMW +
Sbjct: 107 SEYRPKIKGEHPGLSIGDVAKKLGEMWNN 135
>BC066889-1|AAH66889.1| 215|Homo sapiens high-mobility group box 1
protein.
Length = 215
Score = 38.7 bits (86), Expect = 0.004
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +3
Query: 114 STVQKQIKSEHPGLKVTEIAKKGGEMWKS 200
S + +IK EHPGL + ++AKK GEMW +
Sbjct: 107 SEYRPKIKGEHPGLSIGDVAKKLGEMWNN 135
>BC030981-1|AAH30981.1| 215|Homo sapiens high-mobility group box 1
protein.
Length = 215
Score = 38.7 bits (86), Expect = 0.004
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +3
Query: 114 STVQKQIKSEHPGLKVTEIAKKGGEMWKS 200
S + +IK EHPGL + ++AKK GEMW +
Sbjct: 107 SEYRPKIKGEHPGLSIGDVAKKLGEMWNN 135
>BC003378-1|AAH03378.1| 215|Homo sapiens high-mobility group box 1
protein.
Length = 215
Score = 38.7 bits (86), Expect = 0.004
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +3
Query: 114 STVQKQIKSEHPGLKVTEIAKKGGEMWKS 200
S + +IK EHPGL + ++AKK GEMW +
Sbjct: 107 SEYRPKIKGEHPGLSIGDVAKKLGEMWNN 135
>BC001063-1|AAH01063.1| 209|Homo sapiens high-mobility group box 2
protein.
Length = 209
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/31 (58%), Positives = 23/31 (74%), Gaps = 2/31 (6%)
Frame = +3
Query: 129 QIKSEHPGLKVTEIAKKGGEMW--KSMKDNK 215
+IKSEHPGL + + AKK GEMW +S KD +
Sbjct: 112 KIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQ 142
>AY377859-1|AAQ91389.1| 215|Homo sapiens high mobility group
protein 1 protein.
Length = 215
Score = 38.7 bits (86), Expect = 0.004
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +3
Query: 114 STVQKQIKSEHPGLKVTEIAKKGGEMWKS 200
S + +IK EHPGL + ++AKK GEMW +
Sbjct: 107 SEYRPKIKGEHPGLSIGDVAKKLGEMWNN 135
>AL353648-3|CAI15603.1| 158|Homo sapiens high-mobility group box 1
protein.
Length = 158
Score = 38.7 bits (86), Expect = 0.004
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +3
Query: 114 STVQKQIKSEHPGLKVTEIAKKGGEMWKS 200
S + +IK EHPGL + ++AKK GEMW +
Sbjct: 107 SEYRPKIKGEHPGLSIGDVAKKLGEMWNN 135
>AL353648-2|CAI15601.1| 162|Homo sapiens high-mobility group box 1
protein.
Length = 162
Score = 38.7 bits (86), Expect = 0.004
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +3
Query: 114 STVQKQIKSEHPGLKVTEIAKKGGEMWKS 200
S + +IK EHPGL + ++AKK GEMW +
Sbjct: 107 SEYRPKIKGEHPGLSIGDVAKKLGEMWNN 135
>AL353648-1|CAI15600.1| 215|Homo sapiens high-mobility group box 1
protein.
Length = 215
Score = 38.7 bits (86), Expect = 0.004
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +3
Query: 114 STVQKQIKSEHPGLKVTEIAKKGGEMWKS 200
S + +IK EHPGL + ++AKK GEMW +
Sbjct: 107 SEYRPKIKGEHPGLSIGDVAKKLGEMWNN 135
>AB208998-1|BAD92235.1| 176|Homo sapiens high-mobility group box 1
variant protein.
Length = 176
Score = 38.7 bits (86), Expect = 0.004
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +3
Query: 114 STVQKQIKSEHPGLKVTEIAKKGGEMWKS 200
S + +IK EHPGL + ++AKK GEMW +
Sbjct: 109 SEYRPKIKGEHPGLSIGDVAKKLGEMWNN 137
>Y10043-1|CAA71143.1| 200|Homo sapiens high mobility group protein
2a protein.
Length = 200
Score = 38.3 bits (85), Expect = 0.005
Identities = 14/34 (41%), Positives = 25/34 (73%)
Frame = +3
Query: 114 STVQKQIKSEHPGLKVTEIAKKGGEMWKSMKDNK 215
S + +IKS +PG+ + ++AKK GEMW ++ D++
Sbjct: 105 SEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSE 138
>BC103851-1|AAI03852.1| 130|Homo sapiens HMG4L protein protein.
Length = 130
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/46 (39%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Frame = +3
Query: 84 ERPMSP--ICCGSTVQKQIKSEHPGLKVTEIAKKGGEMWKSMKDNK 215
+RP+S + C K IKS +PG+ + ++AKK GEMW ++ D++
Sbjct: 30 KRPLSGFFLFCSEFCPK-IKSTNPGISIGDVAKKLGEMWNNLNDSE 74
>BC103850-1|AAI03851.1| 130|Homo sapiens HMG4L protein protein.
Length = 130
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/46 (39%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Frame = +3
Query: 84 ERPMSP--ICCGSTVQKQIKSEHPGLKVTEIAKKGGEMWKSMKDNK 215
+RP+S + C K IKS +PG+ + ++AKK GEMW ++ D++
Sbjct: 30 KRPLSGFFLFCSEFCPK-IKSTNPGISIGDVAKKLGEMWNNLNDSE 74
>BC103849-1|AAI03850.1| 130|Homo sapiens HMG4L protein protein.
Length = 130
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/46 (39%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Frame = +3
Query: 84 ERPMSP--ICCGSTVQKQIKSEHPGLKVTEIAKKGGEMWKSMKDNK 215
+RP+S + C K IKS +PG+ + ++AKK GEMW ++ D++
Sbjct: 30 KRPLSGFFLFCSEFCPK-IKSTNPGISIGDVAKKLGEMWNNLNDSE 74
>BC070482-1|AAH70482.1| 200|Homo sapiens HMGB3 protein protein.
Length = 200
Score = 38.3 bits (85), Expect = 0.005
Identities = 14/34 (41%), Positives = 25/34 (73%)
Frame = +3
Query: 114 STVQKQIKSEHPGLKVTEIAKKGGEMWKSMKDNK 215
S + +IKS +PG+ + ++AKK GEMW ++ D++
Sbjct: 105 SEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSE 138
>AC007277-1|AAF19244.1| 191|Homo sapiens WUGSC:H_NH0244E06.1
protein.
Length = 191
Score = 36.3 bits (80), Expect = 0.020
Identities = 16/32 (50%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Frame = +3
Query: 129 QIKSEHPGLKVTEIAKKGGEMW-KSMKDNKYL 221
+IK EHPGL ++++AKK EMW + D+K L
Sbjct: 112 KIKGEHPGLPISDVAKKLVEMWNNTFADDKQL 143
>U23752-1|AAB08518.1| 441|Homo sapiens SOX-11 protein.
Length = 441
Score = 32.7 bits (71), Expect = 0.24
Identities = 14/45 (31%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = +3
Query: 84 ERPMSPICCGSTVQKQ-IKSEHPGLKVTEIAKKGGEMWKSMKDNK 215
+RPM+ S ++++ I + P + EI+K+ G+ WK +KD++
Sbjct: 50 KRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSE 94
>BC025789-1|AAH25789.1| 173|Homo sapiens Unknown (protein for
IMAGE:5201591) protein.
Length = 173
Score = 32.7 bits (71), Expect = 0.24
Identities = 14/45 (31%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = +3
Query: 84 ERPMSPICCGSTVQKQ-IKSEHPGLKVTEIAKKGGEMWKSMKDNK 215
+RPM+ S ++++ I + P + EI+K+ G+ WK +KD++
Sbjct: 50 KRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSE 94
>AC108025-1|AAX88930.1| 441|Homo sapiens unknown protein.
Length = 441
Score = 32.7 bits (71), Expect = 0.24
Identities = 14/45 (31%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = +3
Query: 84 ERPMSPICCGSTVQKQ-IKSEHPGLKVTEIAKKGGEMWKSMKDNK 215
+RPM+ S ++++ I + P + EI+K+ G+ WK +KD++
Sbjct: 50 KRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSE 94
>AB028641-1|BAA88122.1| 441|Homo sapiens SOX11 protein.
Length = 441
Score = 32.7 bits (71), Expect = 0.24
Identities = 14/45 (31%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = +3
Query: 84 ERPMSPICCGSTVQKQ-IKSEHPGLKVTEIAKKGGEMWKSMKDNK 215
+RPM+ S ++++ I + P + EI+K+ G+ WK +KD++
Sbjct: 50 KRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSE 94
>L79988-1|AAL77438.1| 403|Homo sapiens nuclear autoantigen protein.
Length = 403
Score = 32.3 bits (70), Expect = 0.32
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 114 STVQKQIKSEHPGLKVTEIAKKGGEMWKS 200
S + +IK EHPGL + ++ KK MW +
Sbjct: 305 SEYRPKIKGEHPGLSIDDVVKKLAGMWNN 333
>BT007176-1|AAP35840.1| 411|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 411
Score = 32.3 bits (70), Expect = 0.32
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 84 ERPMSPICCGST-VQKQIKSEHPGLKVTEIAKKGGEMWKSMKDNK 215
++P+ P S V Q+K+ +P LK+ EI K G MW+ + D +
Sbjct: 67 DKPLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEE 111
>BC063700-1|AAH63700.1| 411|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 411
Score = 32.3 bits (70), Expect = 0.32
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 84 ERPMSPICCGST-VQKQIKSEHPGLKVTEIAKKGGEMWKSMKDNK 215
++P+ P S V Q+K+ +P LK+ EI K G MW+ + D +
Sbjct: 67 DKPLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEE 111
>BC011017-1|AAH11017.1| 411|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 411
Score = 32.3 bits (70), Expect = 0.32
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 84 ERPMSPICCGST-VQKQIKSEHPGLKVTEIAKKGGEMWKSMKDNK 215
++P+ P S V Q+K+ +P LK+ EI K G MW+ + D +
Sbjct: 67 DKPLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEE 111
>BC007082-1|AAH07082.1| 411|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 411
Score = 32.3 bits (70), Expect = 0.32
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 84 ERPMSPICCGST-VQKQIKSEHPGLKVTEIAKKGGEMWKSMKDNK 215
++P+ P S V Q+K+ +P LK+ EI K G MW+ + D +
Sbjct: 67 DKPLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEE 111
>AF076675-2|AAF39781.1| 181|Homo sapiens SP100-HMG protein.
Length = 181
Score = 32.3 bits (70), Expect = 0.32
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 114 STVQKQIKSEHPGLKVTEIAKKGGEMWKS 200
S + +IK EHPGL + ++ KK MW +
Sbjct: 83 SEYRPKIKGEHPGLSIDDVVKKLAGMWNN 111
>AF056322-1|AAC39790.1| 879|Homo sapiens SP100-HMG nuclear
autoantigen protein.
Length = 879
Score = 32.3 bits (70), Expect = 0.32
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 114 STVQKQIKSEHPGLKVTEIAKKGGEMWKS 200
S + +IK EHPGL + ++ KK MW +
Sbjct: 781 SEYRPKIKGEHPGLSIDDVVKKLAGMWNN 809
>AF035262-1|AAC04509.1| 411|Homo sapiens BAF57 protein.
Length = 411
Score = 32.3 bits (70), Expect = 0.32
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 84 ERPMSPICCGST-VQKQIKSEHPGLKVTEIAKKGGEMWKSMKDNK 215
++P+ P S V Q+K+ +P LK+ EI K G MW+ + D +
Sbjct: 67 DKPLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEE 111
>AC010149-1|AAY14879.1| 843|Homo sapiens unknown protein.
Length = 843
Score = 32.3 bits (70), Expect = 0.32
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 114 STVQKQIKSEHPGLKVTEIAKKGGEMWKS 200
S + +IK EHPGL + ++ KK MW +
Sbjct: 745 SEYRPKIKGEHPGLSIDDVVKKLAGMWNN 773
>X70683-1|CAA50018.1| 474|Homo sapiens SOX-4 protein protein.
Length = 474
Score = 31.9 bits (69), Expect = 0.42
Identities = 14/44 (31%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +3
Query: 84 ERPMSPICCGSTVQKQ-IKSEHPGLKVTEIAKKGGEMWKSMKDN 212
+RPM+ S ++++ I + P + EI+K+ G+ WK +KD+
Sbjct: 60 KRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDS 103
>BC072668-1|AAH72668.1| 474|Homo sapiens SOX4 protein protein.
Length = 474
Score = 31.9 bits (69), Expect = 0.42
Identities = 14/44 (31%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +3
Query: 84 ERPMSPICCGSTVQKQ-IKSEHPGLKVTEIAKKGGEMWKSMKDN 212
+RPM+ S ++++ I + P + EI+K+ G+ WK +KD+
Sbjct: 60 KRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDS 103
>AL136179-1|CAC03595.1| 474|Homo sapiens SRY (sex determining
region Y)-box 4 protein.
Length = 474
Score = 31.9 bits (69), Expect = 0.42
Identities = 14/44 (31%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +3
Query: 84 ERPMSPICCGSTVQKQ-IKSEHPGLKVTEIAKKGGEMWKSMKDN 212
+RPM+ S ++++ I + P + EI+K+ G+ WK +KD+
Sbjct: 60 KRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDS 103
>CR456504-1|CAG30390.1| 601|Homo sapiens HMG2L1 protein.
Length = 601
Score = 31.1 bits (67), Expect = 0.74
Identities = 12/37 (32%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = +3
Query: 132 IKSEHPGLKVTEIAKKGGEMWKSMKD-NKYLGRESSQ 239
I ++HPG+ E++KK E+WK + + +K + ++ +Q
Sbjct: 425 IVADHPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQ 461
>BC104756-1|AAI04757.1| 492|Homo sapiens HMG2L1 protein protein.
Length = 492
Score = 31.1 bits (67), Expect = 0.74
Identities = 12/37 (32%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = +3
Query: 132 IKSEHPGLKVTEIAKKGGEMWKSMKD-NKYLGRESSQ 239
I ++HPG+ E++KK E+WK + + +K + ++ +Q
Sbjct: 316 IVADHPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQ 352
>BC104754-1|AAI04755.1| 492|Homo sapiens HMG2L1 protein protein.
Length = 492
Score = 31.1 bits (67), Expect = 0.74
Identities = 12/37 (32%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = +3
Query: 132 IKSEHPGLKVTEIAKKGGEMWKSMKD-NKYLGRESSQ 239
I ++HPG+ E++KK E+WK + + +K + ++ +Q
Sbjct: 316 IVADHPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQ 352
>AL079310-1|CAB45240.1| 492|Homo sapiens hypothetical protein
protein.
Length = 492
Score = 31.1 bits (67), Expect = 0.74
Identities = 12/37 (32%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = +3
Query: 132 IKSEHPGLKVTEIAKKGGEMWKSMKD-NKYLGRESSQ 239
I ++HPG+ E++KK E+WK + + +K + ++ +Q
Sbjct: 316 IVADHPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQ 352
>AL008635-1|CAI21632.1| 601|Homo sapiens high-mobility group
protein 2-like 1 protein.
Length = 601
Score = 31.1 bits (67), Expect = 0.74
Identities = 12/37 (32%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = +3
Query: 132 IKSEHPGLKVTEIAKKGGEMWKSMKD-NKYLGRESSQ 239
I ++HPG+ E++KK E+WK + + +K + ++ +Q
Sbjct: 425 IVADHPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQ 461
>AJ010069-1|CAA08991.1| 196|Homo sapiens HMGBCG protein protein.
Length = 196
Score = 31.1 bits (67), Expect = 0.74
Identities = 12/37 (32%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = +3
Query: 132 IKSEHPGLKVTEIAKKGGEMWKSMKD-NKYLGRESSQ 239
I ++HPG+ E++KK E+WK + + +K + ++ +Q
Sbjct: 20 IVADHPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQ 56
>DQ207367-1|ABB22048.1| 186|Homo sapiens HMG2-like protein protein.
Length = 186
Score = 30.3 bits (65), Expect = 1.3
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 129 QIKSEHPGLKVTEIAKKGGEMWKSMKD 209
Q+K E+P V ++AK G+MW + D
Sbjct: 110 QLKRENPNWSVVQVAKATGKMWSTATD 136
>BC070148-1|AAH70148.1| 112|Homo sapiens high-mobility group box 4
protein.
Length = 112
Score = 30.3 bits (65), Expect = 1.3
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 129 QIKSEHPGLKVTEIAKKGGEMWKSMKD 209
Q+K E+P V ++AK G+MW + D
Sbjct: 36 QLKRENPNWSVVQVAKATGKMWSTATD 62
>BC021180-1|AAH21180.1| 186|Homo sapiens high-mobility group box 4
protein.
Length = 186
Score = 30.3 bits (65), Expect = 1.3
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 129 QIKSEHPGLKVTEIAKKGGEMWKSMKD 209
Q+K E+P V ++AK G+MW + D
Sbjct: 110 QLKRENPNWSVVQVAKATGKMWSTATD 136
>X73038-1|CAA51519.1| 59|Homo sapiens SOX-11 protein.
Length = 59
Score = 28.7 bits (61), Expect = 4.0
Identities = 10/31 (32%), Positives = 21/31 (67%)
Frame = +3
Query: 123 QKQIKSEHPGLKVTEIAKKGGEMWKSMKDNK 215
+++I + P + EI+K+ G+ WK +KD++
Sbjct: 8 RRKIMEQSPDMHNAEISKRLGKRWKMLKDSE 38
>BC021574-1|AAH21574.1| 346|Homo sapiens glucose 6 phosphatase,
catalytic, 3 protein.
Length = 346
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = -3
Query: 263 SLAYCSLALAAFSSQILVIFH*FPH 189
SLAYC+ LA S+I ++ H FPH
Sbjct: 147 SLAYCTFLLAVGLSRIFILAH-FPH 170
>BC002494-1|AAH02494.2| 346|Homo sapiens glucose 6 phosphatase,
catalytic, 3 protein.
Length = 346
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = -3
Query: 263 SLAYCSLALAAFSSQILVIFH*FPH 189
SLAYC+ LA S+I ++ H FPH
Sbjct: 147 SLAYCTFLLAVGLSRIFILAH-FPH 170
>Y13436-1|CAA73847.1| 387|Homo sapiens Sry-related Box 1 protein
protein.
Length = 387
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 78 KAERPMSPICCGSTVQKQ-IKSEHPGLKVTEIAKKGGEMWKSMKD 209
+ +RPM+ S Q++ + E+P + +EI+K+ G WK M +
Sbjct: 50 RVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSE 94
>X56687-1|CAA40016.1| 727|Homo sapiens autoantigen NOR-90 protein.
Length = 727
Score = 28.3 bits (60), Expect = 5.2
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Frame = +3
Query: 78 KAERPMSPICCGSTVQK-QIKSEHPGLKVTEIAKKGGEMWKSM---KDNKYLGRESS 236
K +RP+S + S ++ Q++ E P L +E+ + MW + K KY RE++
Sbjct: 369 KPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYKAREAA 425
>X53461-1|CAA37548.1| 764|Homo sapiens protein ( Human mRNA for
upstream binding factor (hUBF). ).
Length = 764
Score = 28.3 bits (60), Expect = 5.2
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Frame = +3
Query: 78 KAERPMSPICCGSTVQK-QIKSEHPGLKVTEIAKKGGEMWKSM---KDNKYLGRESS 236
K +RP+S + S ++ Q++ E P L +E+ + MW + K KY RE++
Sbjct: 406 KPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYKAREAA 462
>X53390-1|CAA37469.1| 764|Homo sapiens protein ( Human mRNA for
upstream binding factor (hUBF). ).
Length = 764
Score = 28.3 bits (60), Expect = 5.2
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Frame = +3
Query: 78 KAERPMSPICCGSTVQK-QIKSEHPGLKVTEIAKKGGEMWKSM---KDNKYLGRESS 236
K +RP+S + S ++ Q++ E P L +E+ + MW + K KY RE++
Sbjct: 406 KPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYKAREAA 462
>U65487-1|AAC51239.1| 654|Homo sapiens ribosomal RNA upstream
binding transcription factor protein.
Length = 654
Score = 28.3 bits (60), Expect = 5.2
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Frame = +3
Query: 78 KAERPMSPICCGSTVQK-QIKSEHPGLKVTEIAKKGGEMWKSM---KDNKYLGRESS 236
K +RP+S + S ++ Q++ E P L +E+ + MW + K KY RE++
Sbjct: 248 KPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYKAREAA 304
>BC042297-1|AAH42297.1| 727|Homo sapiens upstream binding
transcription factor, RNA polymerase I protein.
Length = 727
Score = 28.3 bits (60), Expect = 5.2
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Frame = +3
Query: 78 KAERPMSPICCGSTVQK-QIKSEHPGLKVTEIAKKGGEMWKSM---KDNKYLGRESS 236
K +RP+S + S ++ Q++ E P L +E+ + MW + K KY RE++
Sbjct: 369 KPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYKAREAA 425
>AL138691-1|CAH72340.1| 391|Homo sapiens SRY (sex determining
region Y)-box 1 protein.
Length = 391
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 78 KAERPMSPICCGSTVQKQ-IKSEHPGLKVTEIAKKGGEMWKSMKD 209
+ +RPM+ S Q++ + E+P + +EI+K+ G WK M +
Sbjct: 50 RVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSE 94
>X65661-1|CAA46612.1| 54|Homo sapiens SOX-4 protein.
Length = 54
Score = 27.9 bits (59), Expect = 6.9
Identities = 10/30 (33%), Positives = 20/30 (66%)
Frame = +3
Query: 123 QKQIKSEHPGLKVTEIAKKGGEMWKSMKDN 212
+++I + P + EI+K+ G+ WK +KD+
Sbjct: 5 RRKIMEQSPDMHNAEISKRLGKRWKLLKDS 34
>M62810-1|AAA59849.1| 246|Homo sapiens mitochondrial transcription
factor 1 protein.
Length = 246
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/45 (28%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 84 ERPMSPICCGSTVQKQI-KSEHPGLKVTEIAKKGGEMWKSMKDNK 215
++P+S S Q I K+++P K TE+ ++ + W+ + D+K
Sbjct: 51 KKPVSSYLRFSKEQLPIFKAQNPDAKTTELIRRIAQRWRELPDSK 95
>CR407653-1|CAG28581.1| 246|Homo sapiens TFAM protein.
Length = 246
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/45 (28%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 84 ERPMSPICCGSTVQKQI-KSEHPGLKVTEIAKKGGEMWKSMKDNK 215
++P+S S Q I K+++P K TE+ ++ + W+ + D+K
Sbjct: 51 KKPVSSYLRFSKEQLPIFKAQNPDAKTTELIRRIAQRWRELPDSK 95
>BT019659-1|AAV38465.1| 246|Homo sapiens transcription factor A,
mitochondrial protein.
Length = 246
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/45 (28%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 84 ERPMSPICCGSTVQKQI-KSEHPGLKVTEIAKKGGEMWKSMKDNK 215
++P+S S Q I K+++P K TE+ ++ + W+ + D+K
Sbjct: 51 KKPVSSYLRFSKEQLPIFKAQNPDAKTTELIRRIAQRWRELPDSK 95
>BT019658-1|AAV38464.1| 246|Homo sapiens transcription factor A,
mitochondrial protein.
Length = 246
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/45 (28%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 84 ERPMSPICCGSTVQKQI-KSEHPGLKVTEIAKKGGEMWKSMKDNK 215
++P+S S Q I K+++P K TE+ ++ + W+ + D+K
Sbjct: 51 KKPVSSYLRFSKEQLPIFKAQNPDAKTTELIRRIAQRWRELPDSK 95
>BC126366-1|AAI26367.1| 246|Homo sapiens transcription factor A,
mitochondrial protein.
Length = 246
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/45 (28%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 84 ERPMSPICCGSTVQKQI-KSEHPGLKVTEIAKKGGEMWKSMKDNK 215
++P+S S Q I K+++P K TE+ ++ + W+ + D+K
Sbjct: 51 KKPVSSYLRFSKEQLPIFKAQNPDAKTTELIRRIAQRWRELPDSK 95
>BC018628-1|AAH18628.1| 99|Homo sapiens Unknown (protein for
IMAGE:4552415) protein.
Length = 99
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/45 (28%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 84 ERPMSPICCGSTVQKQI-KSEHPGLKVTEIAKKGGEMWKSMKDNK 215
++P+S S Q I K+++P K TE+ ++ + W+ + D+K
Sbjct: 51 KKPVSSYLRFSKEQLPIFKAQNPDAKTTELIRRIAQRWRELPDSK 95
>AL137061-1|CAI14398.1| 276|Homo sapiens SRY (sex determining
region Y)-box 21 protein.
Length = 276
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/45 (28%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +3
Query: 84 ERPMSPICCGSTVQKQ-IKSEHPGLKVTEIAKKGGEMWKSMKDNK 215
+RPM+ S Q++ + E+P + +EI+K+ G WK + +++
Sbjct: 9 KRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESE 53
>AF107044-1|AAC95381.1| 276|Homo sapiens DNA-binding protein SOX21
protein.
Length = 276
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/45 (28%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +3
Query: 84 ERPMSPICCGSTVQKQ-IKSEHPGLKVTEIAKKGGEMWKSMKDNK 215
+RPM+ S Q++ + E+P + +EI+K+ G WK + +++
Sbjct: 9 KRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESE 53
>Z31560-1|CAA83435.1| 321|Homo sapiens sox-2 protein.
Length = 321
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/47 (27%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 78 KAERPMSPICCGSTVQKQ-IKSEHPGLKVTEIAKKGGEMWKSMKDNK 215
+ +RPM+ S Q++ + E+P + +EI+K+ G WK + + +
Sbjct: 44 RVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETE 90
>X96421-1|CAA65281.1| 204|Homo sapiens SRY protein.
Length = 204
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/45 (28%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +3
Query: 78 KAERPMSPICCGSTVQKQ-IKSEHPGLKVTEIAKKGGEMWKSMKD 209
+ +RPM+ S Q++ + E+P ++ +EI+K+ G WK + +
Sbjct: 59 RVKRPMNAFIVWSRDQRRKMALENPRMRNSEISKQLGYQWKMLTE 103
>X53772-1|CAA37790.1| 204|Homo sapiens SRY protein.
Length = 204
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/45 (28%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +3
Query: 78 KAERPMSPICCGSTVQKQ-IKSEHPGLKVTEIAKKGGEMWKSMKD 209
+ +RPM+ S Q++ + E+P ++ +EI+K+ G WK + +
Sbjct: 59 RVKRPMNAFIVWSRDQRRKMALENPRMRNSEISKQLGYQWKMLTE 103
>S53156-1|AAB25008.1| 141|Homo sapiens testis-determining factor
protein.
Length = 141
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/45 (28%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +3
Query: 78 KAERPMSPICCGSTVQKQ-IKSEHPGLKVTEIAKKGGEMWKSMKD 209
+ +RPM+ S Q++ + E+P ++ +EI+K+ G WK + +
Sbjct: 36 RVKRPMNAFIVWSRDQRRKMALENPRMRNSEISKQLGYQWKMLTE 80
>L10102-1|AAA60591.1| 204|Homo sapiens sex-determining region Y
protein.
Length = 204
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/45 (28%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +3
Query: 78 KAERPMSPICCGSTVQKQ-IKSEHPGLKVTEIAKKGGEMWKSMKD 209
+ +RPM+ S Q++ + E+P ++ +EI+K+ G WK + +
Sbjct: 59 RVKRPMNAFIVWSRDQRRKMALENPRMRNSEISKQLGYQWKMLTE 103
>L10101-1|AAA60590.1| 204|Homo sapiens sex-determining region Y
protein.
Length = 204
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/45 (28%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +3
Query: 78 KAERPMSPICCGSTVQKQ-IKSEHPGLKVTEIAKKGGEMWKSMKD 209
+ +RPM+ S Q++ + E+P ++ +EI+K+ G WK + +
Sbjct: 59 RVKRPMNAFIVWSRDQRRKMALENPRMRNSEISKQLGYQWKMLTE 103
>L08063-1|AAA16878.1| 204|Homo sapiens sex determination protein
protein.
Length = 204
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/45 (28%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +3
Query: 78 KAERPMSPICCGSTVQKQ-IKSEHPGLKVTEIAKKGGEMWKSMKD 209
+ +RPM+ S Q++ + E+P ++ +EI+K+ G WK + +
Sbjct: 59 RVKRPMNAFIVWSRDQRRKMALENPRMRNSEISKQLGYQWKMLTE 103
>L07335-1|AAA35997.1| 327|Homo sapiens protein ( Homo sapiens
(clone 6AR33) HMG box mRNA, 3' end cds. ).
Length = 327
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/47 (27%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 78 KAERPMSPICCGSTVQKQ-IKSEHPGLKVTEIAKKGGEMWKSMKDNK 215
+ +RPM+ S Q++ + E+P + +EI+K+ G WK + + +
Sbjct: 50 RVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETE 96
>DQ086141-1|AAY88212.1| 198|Homo sapiens SRY protein.
Length = 198
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/45 (28%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +3
Query: 78 KAERPMSPICCGSTVQKQ-IKSEHPGLKVTEIAKKGGEMWKSMKD 209
+ +RPM+ S Q++ + E+P ++ +EI+K+ G WK + +
Sbjct: 59 RVKRPMNAFIVWSRDQRRKMALENPRMRNSEISKQLGYQWKMLTE 103
>DQ086140-1|AAY88211.1| 198|Homo sapiens SRY protein.
Length = 198
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/45 (28%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +3
Query: 78 KAERPMSPICCGSTVQKQ-IKSEHPGLKVTEIAKKGGEMWKSMKD 209
+ +RPM+ S Q++ + E+P ++ +EI+K+ G WK + +
Sbjct: 59 RVKRPMNAFIVWSRDQRRKMALENPRMRNSEISKQLGYQWKMLTE 103
>BC074924-1|AAH74924.1| 204|Homo sapiens sex determining region Y
protein.
Length = 204
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/45 (28%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +3
Query: 78 KAERPMSPICCGSTVQKQ-IKSEHPGLKVTEIAKKGGEMWKSMKD 209
+ +RPM+ S Q++ + E+P ++ +EI+K+ G WK + +
Sbjct: 59 RVKRPMNAFIVWSRDQRRKMALENPRMRNSEISKQLGYQWKMLTE 103
>BC074923-1|AAH74923.1| 204|Homo sapiens sex determining region Y
protein.
Length = 204
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/45 (28%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +3
Query: 78 KAERPMSPICCGSTVQKQ-IKSEHPGLKVTEIAKKGGEMWKSMKD 209
+ +RPM+ S Q++ + E+P ++ +EI+K+ G WK + +
Sbjct: 59 RVKRPMNAFIVWSRDQRRKMALENPRMRNSEISKQLGYQWKMLTE 103
>BC013923-1|AAH13923.1| 317|Homo sapiens SRY (sex determining
region Y)-box 2 protein.
Length = 317
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/47 (27%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 78 KAERPMSPICCGSTVQKQ-IKSEHPGLKVTEIAKKGGEMWKSMKDNK 215
+ +RPM+ S Q++ + E+P + +EI+K+ G WK + + +
Sbjct: 40 RVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETE 86
>AY998490-1|AAX93513.1| 198|Homo sapiens SRY protein protein.
Length = 198
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/45 (28%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +3
Query: 78 KAERPMSPICCGSTVQKQ-IKSEHPGLKVTEIAKKGGEMWKSMKD 209
+ +RPM+ S Q++ + E+P ++ +EI+K+ G WK + +
Sbjct: 59 RVKRPMNAFIVWSRDQRRKMALENPRMRNSEISKQLGYQWKMLTE 103
>AY998489-1|AAX93512.1| 198|Homo sapiens SRY protein protein.
Length = 198
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/45 (28%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +3
Query: 78 KAERPMSPICCGSTVQKQ-IKSEHPGLKVTEIAKKGGEMWKSMKD 209
+ +RPM+ S Q++ + E+P ++ +EI+K+ G WK + +
Sbjct: 59 RVKRPMNAFIVWSRDQRRKMALENPRMRNSEISKQLGYQWKMLTE 103
>AY998488-1|AAX93511.1| 198|Homo sapiens SRY protein protein.
Length = 198
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/45 (28%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +3
Query: 78 KAERPMSPICCGSTVQKQ-IKSEHPGLKVTEIAKKGGEMWKSMKD 209
+ +RPM+ S Q++ + E+P ++ +EI+K+ G WK + +
Sbjct: 59 RVKRPMNAFIVWSRDQRRKMALENPRMRNSEISKQLGYQWKMLTE 103
>AY998487-1|AAY15122.1| 166|Homo sapiens mutant SRY protein
protein.
Length = 166
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/45 (28%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +3
Query: 78 KAERPMSPICCGSTVQKQ-IKSEHPGLKVTEIAKKGGEMWKSMKD 209
+ +RPM+ S Q++ + E+P ++ +EI+K+ G WK + +
Sbjct: 59 RVKRPMNAFIVWSRDQRRKMALENPRMRNSEISKQLGYQWKMLTE 103
>AY998485-1|AAY15120.1| 179|Homo sapiens mutant SRY protein
protein.
Length = 179
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/45 (28%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +3
Query: 78 KAERPMSPICCGSTVQKQ-IKSEHPGLKVTEIAKKGGEMWKSMKD 209
+ +RPM+ S Q++ + E+P ++ +EI+K+ G WK + +
Sbjct: 59 RVKRPMNAFIVWSRDQRRKMALENPRMRNSEISKQLGYQWKMLTE 103
>AY998484-1|AAY15119.1| 179|Homo sapiens mutant SRY protein
protein.
Length = 179
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/45 (28%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +3
Query: 78 KAERPMSPICCGSTVQKQ-IKSEHPGLKVTEIAKKGGEMWKSMKD 209
+ +RPM+ S Q++ + E+P ++ +EI+K+ G WK + +
Sbjct: 59 RVKRPMNAFIVWSRDQRRKMALENPRMRNSEISKQLGYQWKMLTE 103
>AY608625-1|AAT37461.1| 198|Homo sapiens SRY protein.
Length = 198
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/45 (28%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +3
Query: 78 KAERPMSPICCGSTVQKQ-IKSEHPGLKVTEIAKKGGEMWKSMKD 209
+ +RPM+ S Q++ + E+P ++ +EI+K+ G WK + +
Sbjct: 59 RVKRPMNAFIVWSRDQRRKMALENPRMRNSEISKQLGYQWKMLTE 103
>AY601860-1|AAT39019.1| 198|Homo sapiens sex-determining region on
Y protein.
Length = 198
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/45 (28%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +3
Query: 78 KAERPMSPICCGSTVQKQ-IKSEHPGLKVTEIAKKGGEMWKSMKD 209
+ +RPM+ S Q++ + E+P ++ +EI+K+ G WK + +
Sbjct: 59 RVKRPMNAFIVWSRDQRRKMALENPRMRNSEISKQLGYQWKMLTE 103
>AY601859-1|AAT39018.1| 198|Homo sapiens sex-determining region on
Y protein.
Length = 198
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/45 (28%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +3
Query: 78 KAERPMSPICCGSTVQKQ-IKSEHPGLKVTEIAKKGGEMWKSMKD 209
+ +RPM+ S Q++ + E+P ++ +EI+K+ G WK + +
Sbjct: 59 RVKRPMNAFIVWSRDQRRKMALENPRMRNSEISKQLGYQWKMLTE 103
>AY601858-1|AAT39017.1| 198|Homo sapiens sex-determining region on
Y protein.
Length = 198
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/45 (28%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +3
Query: 78 KAERPMSPICCGSTVQKQ-IKSEHPGLKVTEIAKKGGEMWKSMKD 209
+ +RPM+ S Q++ + E+P ++ +EI+K+ G WK + +
Sbjct: 59 RVKRPMNAFIVWSRDQRRKMALENPRMRNSEISKQLGYQWKMLTE 103
>AY601857-1|AAT39016.1| 198|Homo sapiens sex-determining region on
Y protein.
Length = 198
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/45 (28%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +3
Query: 78 KAERPMSPICCGSTVQKQ-IKSEHPGLKVTEIAKKGGEMWKSMKD 209
+ +RPM+ S Q++ + E+P ++ +EI+K+ G WK + +
Sbjct: 59 RVKRPMNAFIVWSRDQRRKMALENPRMRNSEISKQLGYQWKMLTE 103
>AY601856-1|AAT39015.1| 198|Homo sapiens sex-determining region on
Y protein.
Length = 198
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/45 (28%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +3
Query: 78 KAERPMSPICCGSTVQKQ-IKSEHPGLKVTEIAKKGGEMWKSMKD 209
+ +RPM+ S Q++ + E+P ++ +EI+K+ G WK + +
Sbjct: 59 RVKRPMNAFIVWSRDQRRKMALENPRMRNSEISKQLGYQWKMLTE 103
>AY601855-1|AAT39014.1| 198|Homo sapiens sex-determining region on
Y protein.
Length = 198
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/45 (28%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +3
Query: 78 KAERPMSPICCGSTVQKQ-IKSEHPGLKVTEIAKKGGEMWKSMKD 209
+ +RPM+ S Q++ + E+P ++ +EI+K+ G WK + +
Sbjct: 59 RVKRPMNAFIVWSRDQRRKMALENPRMRNSEISKQLGYQWKMLTE 103
>AY601854-1|AAT39013.1| 198|Homo sapiens sex-determining region on
Y protein.
Length = 198
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/45 (28%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +3
Query: 78 KAERPMSPICCGSTVQKQ-IKSEHPGLKVTEIAKKGGEMWKSMKD 209
+ +RPM+ S Q++ + E+P ++ +EI+K+ G WK + +
Sbjct: 59 RVKRPMNAFIVWSRDQRRKMALENPRMRNSEISKQLGYQWKMLTE 103
>AY601853-1|AAT39012.1| 198|Homo sapiens sex-determining region on
Y protein.
Length = 198
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/45 (28%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +3
Query: 78 KAERPMSPICCGSTVQKQ-IKSEHPGLKVTEIAKKGGEMWKSMKD 209
+ +RPM+ S Q++ + E+P ++ +EI+K+ G WK + +
Sbjct: 59 RVKRPMNAFIVWSRDQRRKMALENPRMRNSEISKQLGYQWKMLTE 103
>AY601852-1|AAT39011.1| 198|Homo sapiens sex-determining region on
Y protein.
Length = 198
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/45 (28%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +3
Query: 78 KAERPMSPICCGSTVQKQ-IKSEHPGLKVTEIAKKGGEMWKSMKD 209
+ +RPM+ S Q++ + E+P ++ +EI+K+ G WK + +
Sbjct: 59 RVKRPMNAFIVWSRDQRRKMALENPRMRNSEISKQLGYQWKMLTE 103
>AY573238-1|AAS79428.1| 198|Homo sapiens SRY protein protein.
Length = 198
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/45 (28%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +3
Query: 78 KAERPMSPICCGSTVQKQ-IKSEHPGLKVTEIAKKGGEMWKSMKD 209
+ +RPM+ S Q++ + E+P ++ +EI+K+ G WK + +
Sbjct: 59 RVKRPMNAFIVWSRDQRRKMALENPRMRNSEISKQLGYQWKMLTE 103
>AY330304-1|AAP88269.1| 113|Homo sapiens SRY protein.
Length = 113
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/45 (28%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +3
Query: 78 KAERPMSPICCGSTVQKQ-IKSEHPGLKVTEIAKKGGEMWKSMKD 209
+ +RPM+ S Q++ + E+P ++ +EI+K+ G WK + +
Sbjct: 5 RVKRPMNAFIVWSRDQRRKMALENPRMRNSEISKQLGYQWKMLTE 49
>AY330303-1|AAP88268.1| 106|Homo sapiens SRY protein.
Length = 106
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/45 (28%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +3
Query: 78 KAERPMSPICCGSTVQKQ-IKSEHPGLKVTEIAKKGGEMWKSMKD 209
+ +RPM+ S Q++ + E+P ++ +EI+K+ G WK + +
Sbjct: 5 RVKRPMNAFIVWSRDQRRKMALENPRMRNSEISKQLGYQWKMLTE 49
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,848,401
Number of Sequences: 237096
Number of extensions: 834186
Number of successful extensions: 2860
Number of sequences better than 10.0: 112
Number of HSP's better than 10.0 without gapping: 2838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2860
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1511340428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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