Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_D19
(319 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X71138-1|CAA50468.1| 112|Drosophila melanogaster Hmg-D protein ... 53 9e-08
M77023-1|AAA28609.1| 112|Drosophila melanogaster high mobility ... 53 9e-08
AY118333-1|AAM48362.1| 112|Drosophila melanogaster LD24628p pro... 53 9e-08
AM294363-1|CAL26293.1| 112|Drosophila melanogaster CG17950 prot... 53 9e-08
AM294362-1|CAL26292.1| 112|Drosophila melanogaster CG17950 prot... 53 9e-08
AM294361-1|CAL26291.1| 112|Drosophila melanogaster CG17950 prot... 53 9e-08
AM294360-1|CAL26290.1| 112|Drosophila melanogaster CG17950 prot... 53 9e-08
AM294359-1|CAL26289.1| 112|Drosophila melanogaster CG17950 prot... 53 9e-08
AM294358-1|CAL26288.1| 112|Drosophila melanogaster CG17950 prot... 53 9e-08
AM294357-1|CAL26287.1| 112|Drosophila melanogaster CG17950 prot... 53 9e-08
AM294356-1|CAL26286.1| 112|Drosophila melanogaster CG17950 prot... 53 9e-08
AM294355-1|CAL26285.1| 112|Drosophila melanogaster CG17950 prot... 53 9e-08
AM294354-1|CAL26284.1| 112|Drosophila melanogaster CG17950 prot... 53 9e-08
AM294353-1|CAL26283.1| 112|Drosophila melanogaster CG17950 prot... 53 9e-08
AE013599-3267|AAM71011.1| 112|Drosophila melanogaster CG17950-P... 53 9e-08
AE013599-3266|AAF46759.1| 112|Drosophila melanogaster CG17950-P... 53 9e-08
X68408-1|CAA48471.1| 723|Drosophila melanogaster SSRP1 protein. 52 2e-07
BT004831-1|AAO45187.1| 723|Drosophila melanogaster SD06504p pro... 52 2e-07
AE013599-3689|AAF47064.1| 723|Drosophila melanogaster CG4817-PA... 52 2e-07
L08825-1|AAA28914.1| 723|Drosophila melanogaster single-strande... 50 6e-07
AE014297-3169|AAF56010.1| 126|Drosophila melanogaster CG7045-PA... 49 1e-06
X71139-1|CAA50469.1| 111|Drosophila melanogaster Hmg-Z protein ... 48 3e-06
AY113439-1|AAM29444.1| 111|Drosophila melanogaster RE28596p pro... 48 3e-06
AE013599-3264|AAM70934.1| 111|Drosophila melanogaster CG17921-P... 48 3e-06
AE013599-3263|AAF46758.1| 111|Drosophila melanogaster CG17921-P... 48 3e-06
AY070828-1|AAL48450.1| 138|Drosophila melanogaster AT28425p pro... 48 3e-06
AE014297-3170|AAF56011.1| 133|Drosophila melanogaster CG7046-PA... 48 3e-06
BT016087-1|AAV36972.1| 749|Drosophila melanogaster LD41296p pro... 36 0.015
AJ002520-1|CAC20093.1| 749|Drosophila melanogaster DALAO protei... 36 0.015
AF348329-1|AAK31343.1| 749|Drosophila melanogaster Brahma-assoc... 36 0.015
AE014298-1284|AAF46450.1| 749|Drosophila melanogaster CG7055-PA... 36 0.015
AJ251580-1|CAB63903.1| 529|Drosophila melanogaster Sox100B prot... 35 0.020
AE014297-4702|AAF57112.2| 529|Drosophila melanogaster CG15552-P... 34 0.045
BT025204-1|ABF17895.1| 784|Drosophila melanogaster FI01112p pro... 27 5.2
BT022122-1|AAY51517.1| 784|Drosophila melanogaster IP09065p pro... 27 5.2
AJ250955-1|CAB63944.1| 718|Drosophila melanogaster Sox50E prote... 27 5.2
AE013599-1843|AAF58279.2| 784|Drosophila melanogaster CG8404-PA... 27 5.2
>X71138-1|CAA50468.1| 112|Drosophila melanogaster Hmg-D protein
protein.
Length = 112
Score = 52.8 bits (121), Expect = 9e-08
Identities = 22/45 (48%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
Frame = +3
Query: 78 KAERPMSPICCG-STVQKQIKSEHPGLKVTEIAKKGGEMWKSMKD 209
K +RP+S ++ ++ IK E+PG+KVTE+AK+GGE+W++MKD
Sbjct: 4 KPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAMKD 48
>M77023-1|AAA28609.1| 112|Drosophila melanogaster high mobility
group protein protein.
Length = 112
Score = 52.8 bits (121), Expect = 9e-08
Identities = 22/45 (48%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
Frame = +3
Query: 78 KAERPMSPICCG-STVQKQIKSEHPGLKVTEIAKKGGEMWKSMKD 209
K +RP+S ++ ++ IK E+PG+KVTE+AK+GGE+W++MKD
Sbjct: 4 KPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAMKD 48
>AY118333-1|AAM48362.1| 112|Drosophila melanogaster LD24628p
protein.
Length = 112
Score = 52.8 bits (121), Expect = 9e-08
Identities = 22/45 (48%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
Frame = +3
Query: 78 KAERPMSPICCG-STVQKQIKSEHPGLKVTEIAKKGGEMWKSMKD 209
K +RP+S ++ ++ IK E+PG+KVTE+AK+GGE+W++MKD
Sbjct: 4 KPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAMKD 48
>AM294363-1|CAL26293.1| 112|Drosophila melanogaster CG17950
protein.
Length = 112
Score = 52.8 bits (121), Expect = 9e-08
Identities = 22/45 (48%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
Frame = +3
Query: 78 KAERPMSPICCG-STVQKQIKSEHPGLKVTEIAKKGGEMWKSMKD 209
K +RP+S ++ ++ IK E+PG+KVTE+AK+GGE+W++MKD
Sbjct: 4 KPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAMKD 48
>AM294362-1|CAL26292.1| 112|Drosophila melanogaster CG17950
protein.
Length = 112
Score = 52.8 bits (121), Expect = 9e-08
Identities = 22/45 (48%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
Frame = +3
Query: 78 KAERPMSPICCG-STVQKQIKSEHPGLKVTEIAKKGGEMWKSMKD 209
K +RP+S ++ ++ IK E+PG+KVTE+AK+GGE+W++MKD
Sbjct: 4 KPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAMKD 48
>AM294361-1|CAL26291.1| 112|Drosophila melanogaster CG17950
protein.
Length = 112
Score = 52.8 bits (121), Expect = 9e-08
Identities = 22/45 (48%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
Frame = +3
Query: 78 KAERPMSPICCG-STVQKQIKSEHPGLKVTEIAKKGGEMWKSMKD 209
K +RP+S ++ ++ IK E+PG+KVTE+AK+GGE+W++MKD
Sbjct: 4 KPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAMKD 48
>AM294360-1|CAL26290.1| 112|Drosophila melanogaster CG17950
protein.
Length = 112
Score = 52.8 bits (121), Expect = 9e-08
Identities = 22/45 (48%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
Frame = +3
Query: 78 KAERPMSPICCG-STVQKQIKSEHPGLKVTEIAKKGGEMWKSMKD 209
K +RP+S ++ ++ IK E+PG+KVTE+AK+GGE+W++MKD
Sbjct: 4 KPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAMKD 48
>AM294359-1|CAL26289.1| 112|Drosophila melanogaster CG17950
protein.
Length = 112
Score = 52.8 bits (121), Expect = 9e-08
Identities = 22/45 (48%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
Frame = +3
Query: 78 KAERPMSPICCG-STVQKQIKSEHPGLKVTEIAKKGGEMWKSMKD 209
K +RP+S ++ ++ IK E+PG+KVTE+AK+GGE+W++MKD
Sbjct: 4 KPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAMKD 48
>AM294358-1|CAL26288.1| 112|Drosophila melanogaster CG17950
protein.
Length = 112
Score = 52.8 bits (121), Expect = 9e-08
Identities = 22/45 (48%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
Frame = +3
Query: 78 KAERPMSPICCG-STVQKQIKSEHPGLKVTEIAKKGGEMWKSMKD 209
K +RP+S ++ ++ IK E+PG+KVTE+AK+GGE+W++MKD
Sbjct: 4 KPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAMKD 48
>AM294357-1|CAL26287.1| 112|Drosophila melanogaster CG17950
protein.
Length = 112
Score = 52.8 bits (121), Expect = 9e-08
Identities = 22/45 (48%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
Frame = +3
Query: 78 KAERPMSPICCG-STVQKQIKSEHPGLKVTEIAKKGGEMWKSMKD 209
K +RP+S ++ ++ IK E+PG+KVTE+AK+GGE+W++MKD
Sbjct: 4 KPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAMKD 48
>AM294356-1|CAL26286.1| 112|Drosophila melanogaster CG17950
protein.
Length = 112
Score = 52.8 bits (121), Expect = 9e-08
Identities = 22/45 (48%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
Frame = +3
Query: 78 KAERPMSPICCG-STVQKQIKSEHPGLKVTEIAKKGGEMWKSMKD 209
K +RP+S ++ ++ IK E+PG+KVTE+AK+GGE+W++MKD
Sbjct: 4 KPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAMKD 48
>AM294355-1|CAL26285.1| 112|Drosophila melanogaster CG17950
protein.
Length = 112
Score = 52.8 bits (121), Expect = 9e-08
Identities = 22/45 (48%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
Frame = +3
Query: 78 KAERPMSPICCG-STVQKQIKSEHPGLKVTEIAKKGGEMWKSMKD 209
K +RP+S ++ ++ IK E+PG+KVTE+AK+GGE+W++MKD
Sbjct: 4 KPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAMKD 48
>AM294354-1|CAL26284.1| 112|Drosophila melanogaster CG17950
protein.
Length = 112
Score = 52.8 bits (121), Expect = 9e-08
Identities = 22/45 (48%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
Frame = +3
Query: 78 KAERPMSPICCG-STVQKQIKSEHPGLKVTEIAKKGGEMWKSMKD 209
K +RP+S ++ ++ IK E+PG+KVTE+AK+GGE+W++MKD
Sbjct: 4 KPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAMKD 48
>AM294353-1|CAL26283.1| 112|Drosophila melanogaster CG17950
protein.
Length = 112
Score = 52.8 bits (121), Expect = 9e-08
Identities = 22/45 (48%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
Frame = +3
Query: 78 KAERPMSPICCG-STVQKQIKSEHPGLKVTEIAKKGGEMWKSMKD 209
K +RP+S ++ ++ IK E+PG+KVTE+AK+GGE+W++MKD
Sbjct: 4 KPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAMKD 48
>AE013599-3267|AAM71011.1| 112|Drosophila melanogaster CG17950-PB,
isoform B protein.
Length = 112
Score = 52.8 bits (121), Expect = 9e-08
Identities = 22/45 (48%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
Frame = +3
Query: 78 KAERPMSPICCG-STVQKQIKSEHPGLKVTEIAKKGGEMWKSMKD 209
K +RP+S ++ ++ IK E+PG+KVTE+AK+GGE+W++MKD
Sbjct: 4 KPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAMKD 48
>AE013599-3266|AAF46759.1| 112|Drosophila melanogaster CG17950-PA,
isoform A protein.
Length = 112
Score = 52.8 bits (121), Expect = 9e-08
Identities = 22/45 (48%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
Frame = +3
Query: 78 KAERPMSPICCG-STVQKQIKSEHPGLKVTEIAKKGGEMWKSMKD 209
K +RP+S ++ ++ IK E+PG+KVTE+AK+GGE+W++MKD
Sbjct: 4 KPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAMKD 48
>X68408-1|CAA48471.1| 723|Drosophila melanogaster SSRP1 protein.
Length = 723
Score = 52.0 bits (119), Expect = 2e-07
Identities = 21/29 (72%), Positives = 26/29 (89%)
Frame = +3
Query: 123 QKQIKSEHPGLKVTEIAKKGGEMWKSMKD 209
++ IK E+PG+KVTEIAKKGGEMWK +KD
Sbjct: 570 RESIKRENPGIKVTEIAKKGGEMWKELKD 598
>BT004831-1|AAO45187.1| 723|Drosophila melanogaster SD06504p
protein.
Length = 723
Score = 52.0 bits (119), Expect = 2e-07
Identities = 21/29 (72%), Positives = 26/29 (89%)
Frame = +3
Query: 123 QKQIKSEHPGLKVTEIAKKGGEMWKSMKD 209
++ IK E+PG+KVTEIAKKGGEMWK +KD
Sbjct: 570 RESIKRENPGIKVTEIAKKGGEMWKELKD 598
>AE013599-3689|AAF47064.1| 723|Drosophila melanogaster CG4817-PA
protein.
Length = 723
Score = 52.0 bits (119), Expect = 2e-07
Identities = 21/29 (72%), Positives = 26/29 (89%)
Frame = +3
Query: 123 QKQIKSEHPGLKVTEIAKKGGEMWKSMKD 209
++ IK E+PG+KVTEIAKKGGEMWK +KD
Sbjct: 570 RESIKRENPGIKVTEIAKKGGEMWKELKD 598
>L08825-1|AAA28914.1| 723|Drosophila melanogaster single-stranded
recognition proteinprotein.
Length = 723
Score = 50.0 bits (114), Expect = 6e-07
Identities = 20/29 (68%), Positives = 25/29 (86%)
Frame = +3
Query: 123 QKQIKSEHPGLKVTEIAKKGGEMWKSMKD 209
++ K E+PG+KVTEIAKKGGEMWK +KD
Sbjct: 570 RESYKRENPGIKVTEIAKKGGEMWKELKD 598
>AE014297-3169|AAF56010.1| 126|Drosophila melanogaster CG7045-PA
protein.
Length = 126
Score = 48.8 bits (111), Expect = 1e-06
Identities = 24/56 (42%), Positives = 38/56 (67%), Gaps = 3/56 (5%)
Frame = +3
Query: 78 KAERPMSP--ICCGSTVQKQIKSEHPGLKVTEIAKKGGEMWKSMKD-NKYLGRESS 236
+ ++PMS + ST +K IK+EHP V E++ KGGEMW++M D +K + +ES+
Sbjct: 7 RPKKPMSAFMLWMNSTGRKHIKAEHPDFSVQEVSVKGGEMWRAMADEDKIVWQESA 62
>X71139-1|CAA50469.1| 111|Drosophila melanogaster Hmg-Z protein
protein.
Length = 111
Score = 48.0 bits (109), Expect = 3e-06
Identities = 20/45 (44%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Frame = +3
Query: 78 KAERPMSPICCG-STVQKQIKSEHPGLKVTEIAKKGGEMWKSMKD 209
+ +RP+S + ++QIK ++PG KVT+IAK+GGE+W+ +KD
Sbjct: 5 RPKRPLSAYMLWLNETREQIKKDNPGSKVTDIAKRGGELWRGLKD 49
>AY113439-1|AAM29444.1| 111|Drosophila melanogaster RE28596p
protein.
Length = 111
Score = 48.0 bits (109), Expect = 3e-06
Identities = 20/45 (44%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Frame = +3
Query: 78 KAERPMSPICCG-STVQKQIKSEHPGLKVTEIAKKGGEMWKSMKD 209
+ +RP+S + ++QIK ++PG KVT+IAK+GGE+W+ +KD
Sbjct: 5 RPKRPLSAYMLWLNETREQIKKDNPGSKVTDIAKRGGELWRGLKD 49
>AE013599-3264|AAM70934.1| 111|Drosophila melanogaster CG17921-PB,
isoform B protein.
Length = 111
Score = 48.0 bits (109), Expect = 3e-06
Identities = 20/45 (44%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Frame = +3
Query: 78 KAERPMSPICCG-STVQKQIKSEHPGLKVTEIAKKGGEMWKSMKD 209
+ +RP+S + ++QIK ++PG KVT+IAK+GGE+W+ +KD
Sbjct: 5 RPKRPLSAYMLWLNETREQIKKDNPGSKVTDIAKRGGELWRGLKD 49
>AE013599-3263|AAF46758.1| 111|Drosophila melanogaster CG17921-PA,
isoform A protein.
Length = 111
Score = 48.0 bits (109), Expect = 3e-06
Identities = 20/45 (44%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Frame = +3
Query: 78 KAERPMSPICCG-STVQKQIKSEHPGLKVTEIAKKGGEMWKSMKD 209
+ +RP+S + ++QIK ++PG KVT+IAK+GGE+W+ +KD
Sbjct: 5 RPKRPLSAYMLWLNETREQIKKDNPGSKVTDIAKRGGELWRGLKD 49
>AY070828-1|AAL48450.1| 138|Drosophila melanogaster AT28425p
protein.
Length = 138
Score = 47.6 bits (108), Expect = 3e-06
Identities = 23/56 (41%), Positives = 38/56 (67%), Gaps = 3/56 (5%)
Frame = +3
Query: 78 KAERPMSP--ICCGSTVQKQIKSEHPGLKVTEIAKKGGEMWKSMKD-NKYLGRESS 236
+ ++PMS + ST +K I++EHP V E++ KGGEMW++M D +K + +ES+
Sbjct: 7 RPKKPMSAFMLWMNSTGRKNIRAEHPDFSVQEVSVKGGEMWRAMADEHKIVWQESA 62
>AE014297-3170|AAF56011.1| 133|Drosophila melanogaster CG7046-PA
protein.
Length = 133
Score = 47.6 bits (108), Expect = 3e-06
Identities = 23/56 (41%), Positives = 38/56 (67%), Gaps = 3/56 (5%)
Frame = +3
Query: 78 KAERPMSP--ICCGSTVQKQIKSEHPGLKVTEIAKKGGEMWKSMKD-NKYLGRESS 236
+ ++PMS + ST +K I++EHP V E++ KGGEMW++M D +K + +ES+
Sbjct: 7 RPKKPMSAFMLWMNSTGRKNIRAEHPDFSVQEVSVKGGEMWRAMADEHKIVWQESA 62
>BT016087-1|AAV36972.1| 749|Drosophila melanogaster LD41296p
protein.
Length = 749
Score = 35.5 bits (78), Expect = 0.015
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = +3
Query: 84 ERPMSPICCGST-VQKQIKSEHPGLKVTEIAKKGGEMWKSMKDNK 215
E+P+ P S V +K++HP LK+ E+ KK G MWK + +++
Sbjct: 90 EKPILPYMRYSKRVWDSVKAKHPELKLWELGKKIGAMWKLLPEDE 134
>AJ002520-1|CAC20093.1| 749|Drosophila melanogaster DALAO protein
protein.
Length = 749
Score = 35.5 bits (78), Expect = 0.015
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = +3
Query: 84 ERPMSPICCGST-VQKQIKSEHPGLKVTEIAKKGGEMWKSMKDNK 215
E+P+ P S V +K++HP LK+ E+ KK G MWK + +++
Sbjct: 90 EKPILPYMRYSKRVWDSVKAKHPELKLWELGKKIGAMWKLLPEDE 134
>AF348329-1|AAK31343.1| 749|Drosophila melanogaster
Brahma-associated protein 111kD protein.
Length = 749
Score = 35.5 bits (78), Expect = 0.015
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = +3
Query: 84 ERPMSPICCGST-VQKQIKSEHPGLKVTEIAKKGGEMWKSMKDNK 215
E+P+ P S V +K++HP LK+ E+ KK G MWK + +++
Sbjct: 90 EKPILPYMRYSKRVWDSVKAKHPELKLWELGKKIGAMWKLLPEDE 134
>AE014298-1284|AAF46450.1| 749|Drosophila melanogaster CG7055-PA
protein.
Length = 749
Score = 35.5 bits (78), Expect = 0.015
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = +3
Query: 84 ERPMSPICCGST-VQKQIKSEHPGLKVTEIAKKGGEMWKSMKDNK 215
E+P+ P S V +K++HP LK+ E+ KK G MWK + +++
Sbjct: 90 EKPILPYMRYSKRVWDSVKAKHPELKLWELGKKIGAMWKLLPEDE 134
>AJ251580-1|CAB63903.1| 529|Drosophila melanogaster Sox100B protein
protein.
Length = 529
Score = 35.1 bits (77), Expect = 0.020
Identities = 15/53 (28%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Frame = +3
Query: 57 PSEK**RKAERPMSPICCGSTVQKQIKS-EHPGLKVTEIAKKGGEMWKSMKDN 212
PS++ +RPM+ + +++ S ++P L+ +E++K G++WK++KD+
Sbjct: 69 PSDRKKEHIKRPMNAFMVWAQAARRVMSKQYPHLQNSELSKSLGKLWKNLKDS 121
>AE014297-4702|AAF57112.2| 529|Drosophila melanogaster CG15552-PA
protein.
Length = 529
Score = 33.9 bits (74), Expect = 0.045
Identities = 14/53 (26%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Frame = +3
Query: 57 PSEK**RKAERPMSPICCGSTVQKQIKS-EHPGLKVTEIAKKGGEMWKSMKDN 212
P+++ +RPM+ + +++ S ++P L+ +E++K G++WK++KD+
Sbjct: 69 PTDRKKEHIKRPMNAFMVWAQAARRVMSKQYPHLQNSELSKSLGKLWKNLKDS 121
>BT025204-1|ABF17895.1| 784|Drosophila melanogaster FI01112p
protein.
Length = 784
Score = 27.1 bits (57), Expect = 5.2
Identities = 11/43 (25%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 78 KAERPMSPICCGSTVQ-KQIKSEHPGLKVTEIAKKGGEMWKSM 203
+ RPM+ + ++ K++ E+P L +++K G+ W+S+
Sbjct: 214 RIRRPMNAFMVWAKIERKKLADENPDLHNADLSKMLGKKWRSL 256
>BT022122-1|AAY51517.1| 784|Drosophila melanogaster IP09065p
protein.
Length = 784
Score = 27.1 bits (57), Expect = 5.2
Identities = 11/43 (25%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 78 KAERPMSPICCGSTVQ-KQIKSEHPGLKVTEIAKKGGEMWKSM 203
+ RPM+ + ++ K++ E+P L +++K G+ W+S+
Sbjct: 214 RIRRPMNAFMVWAKIERKKLADENPDLHNADLSKMLGKKWRSL 256
>AJ250955-1|CAB63944.1| 718|Drosophila melanogaster Sox50E protein
protein.
Length = 718
Score = 27.1 bits (57), Expect = 5.2
Identities = 11/43 (25%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 78 KAERPMSPICCGSTVQ-KQIKSEHPGLKVTEIAKKGGEMWKSM 203
+ RPM+ + ++ K++ E+P L +++K G+ W+S+
Sbjct: 214 RIRRPMNAFMVWAKIERKKLADENPDLHNADLSKMLGKKWRSL 256
>AE013599-1843|AAF58279.2| 784|Drosophila melanogaster CG8404-PA
protein.
Length = 784
Score = 27.1 bits (57), Expect = 5.2
Identities = 11/43 (25%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 78 KAERPMSPICCGSTVQ-KQIKSEHPGLKVTEIAKKGGEMWKSM 203
+ RPM+ + ++ K++ E+P L +++K G+ W+S+
Sbjct: 214 RIRRPMNAFMVWAKIERKKLADENPDLHNADLSKMLGKKWRSL 256
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,080,963
Number of Sequences: 53049
Number of extensions: 237341
Number of successful extensions: 557
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 529
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 541
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 652945002
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -