Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_D14
         (401 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    30   0.011
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    30   0.011
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    27   0.080
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    23   1.3  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    21   5.3  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    21   5.3  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    21   6.9  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   6.9  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   6.9  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    20   9.2  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 29.9 bits (64), Expect = 0.011
 Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
 Frame = -1

Query: 149 YLVSVPFYFYCM----FPYDLEVFYFLSVAWLSLDELLIVVSLMP*HIP 15
           Y   + F++ C      PY  E F+   + W S+ + L++V + P  +P
Sbjct: 777 YAFGILFWYLCAGHVRLPYTFEQFHNKELLWTSVKKALMIVGIRPERLP 825


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 29.9 bits (64), Expect = 0.011
 Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
 Frame = -1

Query: 149 YLVSVPFYFYCM----FPYDLEVFYFLSVAWLSLDELLIVVSLMP*HIP 15
           Y   + F++ C      PY  E F+   + W S+ + L++V + P  +P
Sbjct: 815 YAFGILFWYLCAGHVRLPYTFEQFHNKELLWTSVKKALMIVGIRPERLP 863


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 27.1 bits (57), Expect = 0.080
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +2

Query: 17  EYVTALEKQLLEAHQEITRLRIENKIL 97
           EY+  LE++L +AHQE    RI+  I+
Sbjct: 609 EYIPFLERELRKAHQEKDSPRIQTYIM 635


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -3

Query: 234 VPNTFQFNDTIKTIAKITAM 175
           +PNT  FNDT  TI  + A+
Sbjct: 366 IPNTEVFNDTKITITGLNAV 385


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 5.3
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -2

Query: 397 ITVHRYIATVSSVGTV 350
           ITVHR  A  + VGT+
Sbjct: 296 ITVHRNSAQQAGVGTI 311


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 5.3
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -2

Query: 397 ITVHRYIATVSSVGTV 350
           ITVHR  A  + VGT+
Sbjct: 296 ITVHRNSAQQAGVGTI 311


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 7/26 (26%), Positives = 13/26 (50%)
 Frame = -1

Query: 131 FYFYCMFPYDLEVFYFLSVAWLSLDE 54
           F  YC+F +   + Y +   W+  D+
Sbjct: 145 FKAYCLFSFLNTIVYCVPAGWIWGDQ 170


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -3

Query: 330 AEISIVFSSAHKRCLELLCEEAGSRIGP 247
           AE+  +  +A +  ++ LCE   SR GP
Sbjct: 103 AELQSLLKTADQLKIKGLCEVPESRDGP 130


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
            receptor protein.
          Length = 1040

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 13/43 (30%), Positives = 20/43 (46%)
 Frame = -2

Query: 373  TVSSVGTV*C*IVFS*NINCILFRPQKVSRAFMRRGRFQNRSS 245
            T+S   +V    +FS  +  IL RP++  R  M   R+    S
Sbjct: 885  TISLSASVTIACLFSPKLYIILIRPERNVRQSMMPTRYSTTKS 927


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +2

Query: 77  RIENKILRDHMETCSRSRKVPRLD 148
           R++     D M+T  R+ K+ R+D
Sbjct: 491 RMDRMDRMDRMDTMDRTDKMSRID 514


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,145
Number of Sequences: 438
Number of extensions: 2705
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10008927
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)