SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_D13
         (536 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0428 + 3055163-3055573                                          216   1e-56
06_01_0427 - 3054204-3054614                                          216   1e-56
06_01_0423 - 3039527-3039937                                          216   1e-56
05_04_0449 - 21355439-21355849                                        216   1e-56
04_03_0909 + 20748653-20749063                                        216   1e-56
01_06_1456 + 37507156-37507566                                        216   1e-56
06_01_0217 - 1644696-1645034,1645143-1645214                          215   2e-56
03_03_0212 + 15479850-15479921,15479965-15480083,15480175-154802...   215   2e-56
06_01_0425 - 3045557-3046004,3046852-3046856                          214   4e-56
11_01_0348 - 2607315-2607424,2608634-2609030                          210   5e-55
02_03_0108 - 15324922-15325092,15325189-15325279,15325511-15325596    196   9e-51
12_02_0048 - 12852335-12852745                                        188   2e-48
02_03_0107 - 15303890-15304060,15304158-15304248,15304505-153046...   183   7e-47
12_02_0047 - 12836779-12837189                                        174   4e-44
05_05_0297 - 23921648-23921758,23922011-23922089,23922774-239228...   130   5e-31
04_04_0062 + 22437653-22437724,22437866-22437943,22438222-22438392    107   7e-24
04_02_0033 - 8997041-8997754                                           32   0.33 
10_02_0068 + 4888273-4889266,4889375-4889397                           30   1.3  
03_01_0575 + 4247431-4247489,4248475-4248547,4248792-4249229,425...    29   2.3  
06_03_0787 + 24598823-24598973,24600213-24600534,24602499-24602808     28   4.1  
12_02_1043 - 25646075-25646437,25646655-25647959,25648394-25648648     28   5.4  
03_06_0307 + 33027012-33027167,33028505-33028615,33028927-330290...    28   5.4  
03_05_0267 - 22538631-22539452                                         27   9.5  

>06_01_0428 + 3055163-3055573
          Length = 136

 Score =  216 bits (527), Expect = 1e-56
 Identities = 103/110 (93%), Positives = 109/110 (99%)
 Frame = +3

Query: 9   RKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQ 188
           RKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQ
Sbjct: 27  RKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQ 86

Query: 189 SAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 338
           S+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 87  SSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136


>06_01_0427 - 3054204-3054614
          Length = 136

 Score =  216 bits (527), Expect = 1e-56
 Identities = 103/110 (93%), Positives = 109/110 (99%)
 Frame = +3

Query: 9   RKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQ 188
           RKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQ
Sbjct: 27  RKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQ 86

Query: 189 SAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 338
           S+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 87  SSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136


>06_01_0423 - 3039527-3039937
          Length = 136

 Score =  216 bits (527), Expect = 1e-56
 Identities = 103/110 (93%), Positives = 109/110 (99%)
 Frame = +3

Query: 9   RKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQ 188
           RKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQ
Sbjct: 27  RKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQ 86

Query: 189 SAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 338
           S+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 87  SSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136


>05_04_0449 - 21355439-21355849
          Length = 136

 Score =  216 bits (527), Expect = 1e-56
 Identities = 103/110 (93%), Positives = 109/110 (99%)
 Frame = +3

Query: 9   RKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQ 188
           RKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQ
Sbjct: 27  RKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQ 86

Query: 189 SAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 338
           S+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 87  SSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136


>04_03_0909 + 20748653-20749063
          Length = 136

 Score =  216 bits (527), Expect = 1e-56
 Identities = 103/110 (93%), Positives = 109/110 (99%)
 Frame = +3

Query: 9   RKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQ 188
           RKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQ
Sbjct: 27  RKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQ 86

Query: 189 SAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 338
           S+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 87  SSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136


>01_06_1456 + 37507156-37507566
          Length = 136

 Score =  216 bits (527), Expect = 1e-56
 Identities = 103/110 (93%), Positives = 109/110 (99%)
 Frame = +3

Query: 9   RKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQ 188
           RKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQ
Sbjct: 27  RKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQ 86

Query: 189 SAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 338
           S+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 87  SSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136


>06_01_0217 - 1644696-1645034,1645143-1645214
          Length = 136

 Score =  215 bits (524), Expect = 2e-56
 Identities = 104/110 (94%), Positives = 108/110 (98%)
 Frame = +3

Query: 9   RKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQ 188
           RKSAP+TGGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQ
Sbjct: 27  RKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQ 86

Query: 189 SAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 338
           S A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 87  SHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136


>03_03_0212 +
           15479850-15479921,15479965-15480083,15480175-15480265,
           15480363-15480533
          Length = 150

 Score =  215 bits (524), Expect = 2e-56
 Identities = 104/110 (94%), Positives = 108/110 (98%)
 Frame = +3

Query: 9   RKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQ 188
           RKSAP+TGGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQ
Sbjct: 41  RKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQ 100

Query: 189 SAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 338
           S A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 101 SHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 150


>06_01_0425 - 3045557-3046004,3046852-3046856
          Length = 150

 Score =  214 bits (522), Expect = 4e-56
 Identities = 102/109 (93%), Positives = 108/109 (99%)
 Frame = +3

Query: 12  KSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS 191
           KSAP+TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS
Sbjct: 42  KSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS 101

Query: 192 AAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 338
           +A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 102 SAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 150


>11_01_0348 - 2607315-2607424,2608634-2609030
          Length = 168

 Score =  210 bits (513), Expect = 5e-55
 Identities = 100/107 (93%), Positives = 106/107 (99%)
 Frame = +3

Query: 9   RKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQ 188
           RKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQ
Sbjct: 27  RKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQ 86

Query: 189 SAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 329
           S+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG
Sbjct: 87  SSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 133


>02_03_0108 - 15324922-15325092,15325189-15325279,15325511-15325596
          Length = 115

 Score =  196 bits (478), Expect = 9e-51
 Identities = 95/109 (87%), Positives = 102/109 (93%)
 Frame = +3

Query: 9   RKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQ 188
           RKSAP  GGVKKPHRYRPGTVALREIR+YQK+TELLIRKLPFQRLVREIAQ FK D+RFQ
Sbjct: 6   RKSAPCIGGVKKPHRYRPGTVALREIRKYQKNTELLIRKLPFQRLVREIAQLFKHDMRFQ 65

Query: 189 SAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 335
           S A+ ALQEA+EAYLVGLFEDTNLCAIH+KRVTIM KD+QLARRIRGER
Sbjct: 66  SHAVLALQEAAEAYLVGLFEDTNLCAIHSKRVTIMSKDVQLARRIRGER 114


>12_02_0048 - 12852335-12852745
          Length = 136

 Score =  188 bits (458), Expect = 2e-48
 Identities = 89/110 (80%), Positives = 102/110 (92%)
 Frame = +3

Query: 9   RKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQ 188
           RKSAP+  G+KKPHR++PGTVALREIR YQKSTELLIRKLPFQRLV+EIAQD ++ +RFQ
Sbjct: 27  RKSAPTMAGLKKPHRFKPGTVALREIRTYQKSTELLIRKLPFQRLVQEIAQDVRSYVRFQ 86

Query: 189 SAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 338
           S+A+ ALQEA+E YLVGLF+DTNLC IHAKRVTIMPKDIQLARRIRGE+A
Sbjct: 87  SSAVVALQEAAETYLVGLFKDTNLCVIHAKRVTIMPKDIQLARRIRGEKA 136


>02_03_0107 -
           15303890-15304060,15304158-15304248,15304505-15304614,
           15304715-15304784,15306365-15306558
          Length = 211

 Score =  183 bits (446), Expect = 7e-47
 Identities = 91/109 (83%), Positives = 99/109 (90%)
 Frame = +3

Query: 9   RKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQ 188
           RKS P  G VKKP R+RPGTVALREIR+YQK+TELLIRKLPFQRLVREIAQ FK D+RFQ
Sbjct: 103 RKSVPFIG-VKKPRRHRPGTVALREIRKYQKNTELLIRKLPFQRLVREIAQHFKHDMRFQ 161

Query: 189 SAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 335
           S A+ ALQEA+EAYLVGLFEDTNLCAIH+KRVTIM KD+QLARRIRGER
Sbjct: 162 SHAVLALQEAAEAYLVGLFEDTNLCAIHSKRVTIMSKDVQLARRIRGER 210


>12_02_0047 - 12836779-12837189
          Length = 136

 Score =  174 bits (423), Expect = 4e-44
 Identities = 84/110 (76%), Positives = 94/110 (85%)
 Frame = +3

Query: 9   RKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQ 188
           RKSAP   G+KKPHR+ P  VALREIR YQKSTELLIRKLPFQRLV+EI QD ++ +RFQ
Sbjct: 27  RKSAPMMAGLKKPHRFNPWIVALREIRTYQKSTELLIRKLPFQRLVQEITQDIRSYVRFQ 86

Query: 189 SAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 338
           S+A+  LQEA+E YLVGLFEDTNLC IHAKRVTIMPKDIQLAR I GE+A
Sbjct: 87  SSAMAVLQEAAETYLVGLFEDTNLCVIHAKRVTIMPKDIQLARCIGGEKA 136


>05_05_0297 -
           23921648-23921758,23922011-23922089,23922774-23922822,
           23923180-23923255,23923693-23923767,23923862-23923992,
           23924830-23924935
          Length = 208

 Score =  130 bits (315), Expect = 5e-31
 Identities = 66/100 (66%), Positives = 80/100 (80%), Gaps = 1/100 (1%)
 Frame = +3

Query: 39  KKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDL-RFQSAAIGALQE 215
           +KPHR+RPGTVALREIR++QK+TELLI   PF RLVREI   +  D+ R+   A+ ALQE
Sbjct: 45  RKPHRFRPGTVALREIRKFQKTTELLIPFAPFSRLVREITDFYSKDVSRWTLEALLALQE 104

Query: 216 ASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 335
           A+E +LV +FE +NLCAIHAKRVTIM KD+QLARRI G R
Sbjct: 105 AAEYHLVDIFEVSNLCAIHAKRVTIMQKDMQLARRIGGRR 144


>04_04_0062 + 22437653-22437724,22437866-22437943,22438222-22438392
          Length = 106

 Score =  107 bits (256), Expect = 7e-24
 Identities = 52/56 (92%), Positives = 54/56 (96%)
 Frame = +3

Query: 171 TDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 338
           TDLRFQS A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 51  TDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 106



 Score = 40.7 bits (91), Expect = 7e-04
 Identities = 19/39 (48%), Positives = 24/39 (61%)
 Frame = +3

Query: 9   RKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRK 125
           RKSAP+TGGVKKPHRY P         R+Q    L +++
Sbjct: 27  RKSAPTTGGVKKPHRYPPWKRCSSTDLRFQSHAVLALQE 65


>04_02_0033 - 8997041-8997754
          Length = 237

 Score = 31.9 bits (69), Expect = 0.33
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +1

Query: 250 TPTFAPSTPNA*PLCLKTSSSPG 318
           TPT  PSTPN  P C++   +PG
Sbjct: 156 TPTATPSTPNGDPFCIRGVRTPG 178


>10_02_0068 + 4888273-4889266,4889375-4889397
          Length = 338

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 31/101 (30%), Positives = 45/101 (44%), Gaps = 1/101 (0%)
 Frame = -1

Query: 344 NLSTLSADSPGELDVFRHNGYAFGVDGAKVGVFKQTHQIGFTGLLQSANGSRLETKIGFK 165
           NLST    +     + + NGY FG     VGV  QT++  +T  L   + +R E ++   
Sbjct: 74  NLSTTPPATAAGTIILKGNGYYFGDQENPVGV--QTNKSWWTVDLIDIDVTRGEVRVAVP 131

Query: 164 VLSNFS-NESLERQLADQQLRRFLIATNFSKRYSTRAITMG 45
           V S+ S NES        Q   F     FS   +TR + +G
Sbjct: 132 VSSDCSTNESYHELSIFTQSLNFSTTFLFS---ATRNVLLG 169


>03_01_0575 +
           4247431-4247489,4248475-4248547,4248792-4249229,
           4252122-4253339
          Length = 595

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
 Frame = +3

Query: 57  RPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLV 236
           RP  V L +   Y+ + EL + K  F  L R+  +  +  L FQS  +       E+Y+ 
Sbjct: 171 RPRPVYLIDFACYKPADELKVSKAEFIDLARKSGKFDEDSLAFQSRLLAKSGIGDESYMP 230

Query: 237 G-LFEDTNLCA 266
             +FE    CA
Sbjct: 231 RCVFEPGTNCA 241


>06_03_0787 + 24598823-24598973,24600213-24600534,24602499-24602808
          Length = 260

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -1

Query: 314 GELDVFRHNGYAFGVDGAKVG 252
           G+LD+FR+  Y  GV GA  G
Sbjct: 58  GDLDIFRYGRYTAGVSGALFG 78


>12_02_1043 - 25646075-25646437,25646655-25647959,25648394-25648648
          Length = 640

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 21/71 (29%), Positives = 29/71 (40%)
 Frame = +3

Query: 192 AAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA*INVLYHILLI 371
           AA+G        Y   L    +L   H     +MP+D+ LA  + G       L   L  
Sbjct: 409 AAVGRRDLFDAPYTTQLLRSCSLAVGHLDMELVMPEDMALANWLGGGGGACEDLIRHLPE 468

Query: 372 LIRIDVRSLHI 404
           L R+ V SL+I
Sbjct: 469 LPRVTVLSLNI 479


>03_06_0307 +
           33027012-33027167,33028505-33028615,33028927-33029065,
           33029215-33029323,33029422-33029425
          Length = 172

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
 Frame = +3

Query: 6   RRKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRK-LPFQRLVREIAQDFKTDLR 182
           +  SA S G   +  R R        ++   +STE L+RK    +R++R + +  +++  
Sbjct: 13  KSSSASSAGAAAERKRKRAAAAKTVSLKNQIRSTERLLRKRRKIERMIRRLEKQQRSNAD 72

Query: 183 FQSAAIGALQEASE 224
             S  +  L+E  E
Sbjct: 73  DASNKLSKLKEDLE 86


>03_05_0267 - 22538631-22539452
          Length = 273

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
 Frame = +1

Query: 217 PVKPIWWVCLKTPTFAPSTPNA*PL-CLKTSSSPGESAES 333
           P +P WW C  +P+  P++P+  P      SSSP     +
Sbjct: 175 PARPRWWPC--SPSSPPASPSPSPARTSPPSSSPSRGCSA 212


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,455,009
Number of Sequences: 37544
Number of extensions: 255153
Number of successful extensions: 682
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 667
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 680
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1186491600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -