Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_D09
         (531 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132860-19|CAB60502.1|  159|Caenorhabditis elegans Hypothetical...    76   2e-14
AF022977-1|ABF71715.1| 1285|Caenorhabditis elegans Peroxidasin (...    30   1.2  
Z77656-2|CAE17769.1|  724|Caenorhabditis elegans Hypothetical pr...    28   3.6  
Z68337-9|CAA92751.2|  334|Caenorhabditis elegans Hypothetical pr...    28   4.8  
AC006748-1|AAF60514.2|  323|Caenorhabditis elegans Serpentine re...    28   4.8  
Z81512-8|CAH19099.1|  509|Caenorhabditis elegans Hypothetical pr...    27   6.3  
Z81512-7|CAD54133.1|  504|Caenorhabditis elegans Hypothetical pr...    27   6.3  
AL033515-2|CAH19093.1|  509|Caenorhabditis elegans Hypothetical ...    27   6.3  
AL033515-1|CAD54179.1|  504|Caenorhabditis elegans Hypothetical ...    27   6.3  
AL033511-2|CAH19091.1|  509|Caenorhabditis elegans Hypothetical ...    27   6.3  
AL033511-1|CAA22072.2|  504|Caenorhabditis elegans Hypothetical ...    27   6.3  
AC024807-1|AAF59529.5|  704|Caenorhabditis elegans Hypothetical ...    27   8.4  

>AL132860-19|CAB60502.1|  159|Caenorhabditis elegans Hypothetical
           protein Y56A3A.21 protein.
          Length = 159

 Score = 75.8 bits (178), Expect = 2e-14
 Identities = 45/149 (30%), Positives = 74/149 (49%), Gaps = 1/149 (0%)
 Frame = +2

Query: 86  ILLTFAYISRGIAESCQNPKVEATSFTSLDATVVTQIAYITEFSLKCDNPLPENYALYAE 265
           I +    ++  +   C++PK  A+SF++ D     +  +ITEF+L+C N  P+N    AE
Sbjct: 4   IAVALCLVASALCAKCESPKYSASSFSTTDGFFHYKTTFITEFTLQCSNN-PKNIQYTAE 62

Query: 266 VDENTLTAARVGEN-KYQVSWTEEPAKARSGVHEINILDEEGWASLRRARRSDPTATVAP 442
           V+   +  +   E  K+QVSWT E   A +    INI DEEG A   +           P
Sbjct: 63  VNGRLIPVSISDETAKFQVSWTLEHKDAGAQTFNINIFDEEGAAQYAK------NPVTKP 116

Query: 443 LLAIQLHHPGSYSGPWVNSEVLATVMSIV 529
           L  +Q  H G  +   ++SE +A ++ ++
Sbjct: 117 LFTVQQSHGGLATKSPISSETVAVIIVVI 145


>AF022977-1|ABF71715.1| 1285|Caenorhabditis elegans Peroxidasin
           (drosophila peroxidase)homolog protein 1 protein.
          Length = 1285

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 17/45 (37%), Positives = 22/45 (48%)
 Frame = +2

Query: 209 EFSLKCDNPLPENYALYAEVDENTLTAARVGENKYQVSWTEEPAK 343
           E  + C NP+   +    EVD++ LT AR  E     SWT E  K
Sbjct: 202 EKKVYCTNPVELRHQALDEVDDSALTCARPAEE----SWTGEEIK 242


>Z77656-2|CAE17769.1|  724|Caenorhabditis elegans Hypothetical
           protein F07B10.4 protein.
          Length = 724

 Score = 28.3 bits (60), Expect = 3.6
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = +1

Query: 172 RRYSCNSNSLYY*IFTEMRQSTA*ELRIVC*S**KHINSGSSWRK 306
           + Y+  S  L+Y +FT+  Q TA  L  V      HI +  +WRK
Sbjct: 285 KTYTGASGMLFYSVFTQAHQGTAFTLFYVL----SHIKTKKTWRK 325


>Z68337-9|CAA92751.2|  334|Caenorhabditis elegans Hypothetical
           protein M7.13 protein.
          Length = 334

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = +2

Query: 74  IPIVILLTFAYISRGIAESCQNPKVEATSFTSLD 175
           IP+ I+ TFA++  G+   C    +  + + +LD
Sbjct: 270 IPVTIIYTFAFMGHGMGTICGIASITISMYPALD 303


>AC006748-1|AAF60514.2|  323|Caenorhabditis elegans Serpentine
           receptor, class d (delta)protein 66 protein.
          Length = 323

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +1

Query: 394 VTPPRSSLRPDCHCCSITRYSTPSSW 471
           +TP R+S+R    C S+ R ST  SW
Sbjct: 292 ITPYRNSIREFLECKSMPRGSTSGSW 317


>Z81512-8|CAH19099.1|  509|Caenorhabditis elegans Hypothetical
           protein Y44A6E.1b protein.
          Length = 509

 Score = 27.5 bits (58), Expect = 6.3
 Identities = 11/29 (37%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
 Frame = +3

Query: 420 TRLPLLLHYSLFNSIILAV-TLAPGLIQK 503
           T +PLL+ Y LFN +I+++  +  G++ K
Sbjct: 334 THVPLLVAYFLFNMVIVSIAAMTTGIVMK 362


>Z81512-7|CAD54133.1|  504|Caenorhabditis elegans Hypothetical
           protein Y44A6E.1a protein.
          Length = 504

 Score = 27.5 bits (58), Expect = 6.3
 Identities = 11/29 (37%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
 Frame = +3

Query: 420 TRLPLLLHYSLFNSIILAV-TLAPGLIQK 503
           T +PLL+ Y LFN +I+++  +  G++ K
Sbjct: 329 THVPLLVAYFLFNMVIVSIAAMTTGIVMK 357


>AL033515-2|CAH19093.1|  509|Caenorhabditis elegans Hypothetical
           protein Y44A6E.1b protein.
          Length = 509

 Score = 27.5 bits (58), Expect = 6.3
 Identities = 11/29 (37%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
 Frame = +3

Query: 420 TRLPLLLHYSLFNSIILAV-TLAPGLIQK 503
           T +PLL+ Y LFN +I+++  +  G++ K
Sbjct: 334 THVPLLVAYFLFNMVIVSIAAMTTGIVMK 362


>AL033515-1|CAD54179.1|  504|Caenorhabditis elegans Hypothetical
           protein Y44A6E.1a protein.
          Length = 504

 Score = 27.5 bits (58), Expect = 6.3
 Identities = 11/29 (37%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
 Frame = +3

Query: 420 TRLPLLLHYSLFNSIILAV-TLAPGLIQK 503
           T +PLL+ Y LFN +I+++  +  G++ K
Sbjct: 329 THVPLLVAYFLFNMVIVSIAAMTTGIVMK 357


>AL033511-2|CAH19091.1|  509|Caenorhabditis elegans Hypothetical
           protein Y44A6E.1b protein.
          Length = 509

 Score = 27.5 bits (58), Expect = 6.3
 Identities = 11/29 (37%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
 Frame = +3

Query: 420 TRLPLLLHYSLFNSIILAV-TLAPGLIQK 503
           T +PLL+ Y LFN +I+++  +  G++ K
Sbjct: 334 THVPLLVAYFLFNMVIVSIAAMTTGIVMK 362


>AL033511-1|CAA22072.2|  504|Caenorhabditis elegans Hypothetical
           protein Y44A6E.1a protein.
          Length = 504

 Score = 27.5 bits (58), Expect = 6.3
 Identities = 11/29 (37%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
 Frame = +3

Query: 420 TRLPLLLHYSLFNSIILAV-TLAPGLIQK 503
           T +PLL+ Y LFN +I+++  +  G++ K
Sbjct: 329 THVPLLVAYFLFNMVIVSIAAMTTGIVMK 357


>AC024807-1|AAF59529.5|  704|Caenorhabditis elegans Hypothetical
           protein Y53G8AL.1 protein.
          Length = 704

 Score = 27.1 bits (57), Expect = 8.4
 Identities = 18/71 (25%), Positives = 28/71 (39%)
 Frame = +2

Query: 122 AESCQNPKVEATSFTSLDATVVTQIAYITEFSLKCDNPLPENYALYAEVDENTLTAARVG 301
           A+  QNP+++     SLD    T+   I E S   +    EN     E  E +     + 
Sbjct: 276 AKPAQNPEIDLPEVPSLDLEETTENPEIPEISTPREEDSAENLENLVENSEKSEILEDLE 335

Query: 302 ENKYQVSWTEE 334
           EN   ++   E
Sbjct: 336 ENSKNLTENSE 346


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,075,859
Number of Sequences: 27780
Number of extensions: 255695
Number of successful extensions: 635
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 634
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1049512662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)