Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_D07
         (480 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeot...    25   1.0  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         23   5.4  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         23   5.4  
AY341209-1|AAR13773.1|  196|Anopheles gambiae SP14D1 protein.          23   5.4  
AY341208-1|AAR13772.1|  196|Anopheles gambiae SP14D1 protein.          23   5.4  
AY341207-1|AAR13771.1|  196|Anopheles gambiae SP14D1 protein.          23   5.4  
AY341206-1|AAR13770.1|  196|Anopheles gambiae SP14D1 protein.          23   5.4  

>AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeotic
           protein protein.
          Length = 308

 Score = 25.4 bits (53), Expect = 1.0
 Identities = 13/28 (46%), Positives = 14/28 (50%)
 Frame = -2

Query: 137 GFPERTTHPSLEPISSSARQHFNDADDM 54
           G P+ T HP L   S SA Q F   D M
Sbjct: 91  GLPDITRHPWLVTASQSALQKFASTDWM 118


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 5.4
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +2

Query: 44  TPLPCHPHH 70
           TPLP HP+H
Sbjct: 247 TPLPLHPYH 255


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 5.4
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +2

Query: 44  TPLPCHPHH 70
           TPLP HP+H
Sbjct: 247 TPLPLHPYH 255


>AY341209-1|AAR13773.1|  196|Anopheles gambiae SP14D1 protein.
          Length = 196

 Score = 23.0 bits (47), Expect = 5.4
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -2

Query: 188 AYRHNGLSNTHTRYCALGFPERTT 117
           AY+ NG+S   T+ CA G   + T
Sbjct: 119 AYQRNGISLDSTQMCAGGIRGKDT 142


>AY341208-1|AAR13772.1|  196|Anopheles gambiae SP14D1 protein.
          Length = 196

 Score = 23.0 bits (47), Expect = 5.4
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -2

Query: 188 AYRHNGLSNTHTRYCALGFPERTT 117
           AY+ NG+S   T+ CA G   + T
Sbjct: 119 AYQRNGISLDSTQMCAGGIRGKDT 142


>AY341207-1|AAR13771.1|  196|Anopheles gambiae SP14D1 protein.
          Length = 196

 Score = 23.0 bits (47), Expect = 5.4
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -2

Query: 188 AYRHNGLSNTHTRYCALGFPERTT 117
           AY+ NG+S   T+ CA G   + T
Sbjct: 119 AYQRNGISLDSTQMCAGGIRGKDT 142


>AY341206-1|AAR13770.1|  196|Anopheles gambiae SP14D1 protein.
          Length = 196

 Score = 23.0 bits (47), Expect = 5.4
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -2

Query: 188 AYRHNGLSNTHTRYCALGFPERTT 117
           AY+ NG+S   T+ CA G   + T
Sbjct: 119 AYQRNGISLDSTQMCAGGIRGKDT 142


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 553,360
Number of Sequences: 2352
Number of extensions: 11724
Number of successful extensions: 18
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 41863041
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)