Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0009_D05
         (259 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   3.2  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    20   4.3  
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    20   5.6  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    20   5.6  
DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channe...    20   5.6  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    20   5.6  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             19   7.4  
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    19   9.8  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    19   9.8  

>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 20.6 bits (41), Expect = 3.2
 Identities = 5/10 (50%), Positives = 8/10 (80%)
 Frame = -3

Query: 176 LCCTPLIGWR 147
           +C  PL+GW+
Sbjct: 196 ICFPPLVGWK 205


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 20.2 bits (40), Expect = 4.3
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = +1

Query: 85  VTVGDVVVKEPHAEVVSGAVDLHPINGVQQRDEGQEQS 198
           VT+ +V V +         VDL  + G Q + + +EQ+
Sbjct: 465 VTIQNVDVSQLVTLFTDFYVDLDAVTGHQSQQQQEEQT 502



 Score = 19.4 bits (38), Expect = 7.4
 Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 5/26 (19%)
 Frame = +1

Query: 88   TVGDVVVKE-----PHAEVVSGAVDL 150
            TV D +V E     P +EV+ GA+ L
Sbjct: 943  TVQDQIVSEYYQNKPISEVIGGAISL 968


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 19.8 bits (39), Expect = 5.6
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +1

Query: 151 HPINGVQQRDEGQ 189
           HP+ G  +R EG+
Sbjct: 128 HPVTGCGERTEGR 140


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 19.8 bits (39), Expect = 5.6
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +1

Query: 151 HPINGVQQRDEGQ 189
           HP+ G  +R EG+
Sbjct: 133 HPVTGCGERTEGR 145


>DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channel
           protein.
          Length = 489

 Score = 19.8 bits (39), Expect = 5.6
 Identities = 6/22 (27%), Positives = 10/22 (45%)
 Frame = -2

Query: 210 RWWCALFLTLIPLLHPIDWVEI 145
           R W      L+ ++H I W  +
Sbjct: 4   RMWLQQIFILLQMIHLIAWASL 25


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 19.8 bits (39), Expect = 5.6
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +1

Query: 151 HPINGVQQRDEGQ 189
           HP+ G  +R EG+
Sbjct: 133 HPVTGCGERTEGR 145


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 19.4 bits (38), Expect = 7.4
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -1

Query: 256  RDVHRGSYDGN 224
            RDV  G YDG+
Sbjct: 1267 RDVSEGIYDGS 1277


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 19.0 bits (37), Expect = 9.8
 Identities = 5/12 (41%), Positives = 9/12 (75%)
 Frame = +3

Query: 48  QTPAATHRQYYP 83
           + PA+ + +YYP
Sbjct: 219 EVPASRNEEYYP 230


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 19.0 bits (37), Expect = 9.8
 Identities = 8/30 (26%), Positives = 13/30 (43%)
 Frame = -3

Query: 122 AWGSFTTTSPTVTWVVLTMCSCRRLSAA*G 33
           AW + T     + W  L +  CR ++   G
Sbjct: 119 AWRNATRCIGRIQWSKLQVFDCRYVTTTSG 148


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.311    0.129    0.371 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,510
Number of Sequences: 438
Number of extensions: 1097
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  4636803
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.5 bits)