Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0009_D02
(319 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0440 - 3358786-3358918,3359861-3360146,3360460-3360538 76 5e-15
12_01_0443 - 3498848-3498980,3500504-3500789,3500928-3501006 76 7e-15
05_01_0043 - 295041-295173,296252-296537,296616-296697 76 7e-15
02_04_0181 - 20705307-20705439,20705991-20706037,20706181-207062... 75 2e-14
01_07_0267 + 42410174-42410252,42410679-42411097 71 2e-13
01_05_0664 + 24122958-24123070,24123184-24123261,24125040-241252... 31 0.20
01_05_0399 - 21784997-21785284,21785450-21785603,21786444-217866... 29 0.60
08_02_1010 - 23538517-23538750,23539199-23539507,23539902-235400... 28 1.4
04_04_0552 + 26195452-26195614,26195682-26195725,26198390-26199541 28 1.4
10_08_0401 + 17629912-17630376 28 1.8
02_01_0202 + 1366149-1366594,1368444-1368444,1368616-1368743,136... 28 1.8
12_02_0842 - 23588826-23589198,23589548-23590203 27 3.2
07_01_0430 - 3277844-3277851,3277893-3278096,3278214-3278303,327... 27 3.2
05_03_0043 - 7702940-7703077,7703361-7703420,7703562-7703612,770... 27 3.2
04_01_0567 - 7263744-7263922,7264020-7264259,7264919-7264982,726... 27 3.2
03_02_0308 - 7297228-7298008,7298495-7298576,7298612-7298669,729... 27 3.2
03_01_0218 - 1717246-1717892,1717995-1718163,1718262-1720022,172... 27 3.2
06_03_0874 - 25580417-25580419,25580504-25580604,25580828-255814... 27 4.2
03_01_0300 + 2350232-2352274,2352349-2352669,2352752-2352838,235... 26 5.6
06_03_1505 + 30635572-30635802,30636977-30637135,30637217-306373... 26 7.4
10_08_0841 - 20948719-20948919,20949624-20950388,20950475-209510... 25 9.7
07_01_0362 - 2667031-2667090,2667182-2667426,2667749-2669471,266... 25 9.7
01_06_1805 - 39999987-40000169,40000648-40000974,40001724-400020... 25 9.7
>11_01_0440 - 3358786-3358918,3359861-3360146,3360460-3360538
Length = 165
Score = 76.2 bits (179), Expect = 5e-15
Identities = 34/45 (75%), Positives = 41/45 (91%)
Frame = +2
Query: 185 MGAASAIIFSSLGAAYGTAKSGTGIAAMAVMRPEQIMKSIIPVVM 319
+GAASA+IFS +GAAYGTAKSG G+A+M VMRPE +MKSI+PVVM
Sbjct: 17 LGAASALIFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM 61
>12_01_0443 - 3498848-3498980,3500504-3500789,3500928-3501006
Length = 165
Score = 75.8 bits (178), Expect = 7e-15
Identities = 33/45 (73%), Positives = 41/45 (91%)
Frame = +2
Query: 185 MGAASAIIFSSLGAAYGTAKSGTGIAAMAVMRPEQIMKSIIPVVM 319
+GAASA++FS +GAAYGTAKSG G+A+M VMRPE +MKSI+PVVM
Sbjct: 17 LGAASALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM 61
>05_01_0043 - 295041-295173,296252-296537,296616-296697
Length = 166
Score = 75.8 bits (178), Expect = 7e-15
Identities = 33/45 (73%), Positives = 41/45 (91%)
Frame = +2
Query: 185 MGAASAIIFSSLGAAYGTAKSGTGIAAMAVMRPEQIMKSIIPVVM 319
+GAASA++FS +GAAYGTAKSG G+A+M VMRPE +MKSI+PVVM
Sbjct: 18 LGAASALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM 62
>02_04_0181 -
20705307-20705439,20705991-20706037,20706181-20706229,
20706685-20707055
Length = 199
Score = 74.5 bits (175), Expect = 2e-14
Identities = 32/45 (71%), Positives = 41/45 (91%)
Frame = +2
Query: 185 MGAASAIIFSSLGAAYGTAKSGTGIAAMAVMRPEQIMKSIIPVVM 319
+GAA+A++FS +GAAYGTAKSG G+A+M VMRPE +MKSI+PVVM
Sbjct: 19 LGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM 63
>01_07_0267 + 42410174-42410252,42410679-42411097
Length = 165
Score = 70.9 bits (166), Expect = 2e-13
Identities = 32/48 (66%), Positives = 40/48 (83%)
Frame = +2
Query: 176 LEVMGAASAIIFSSLGAAYGTAKSGTGIAAMAVMRPEQIMKSIIPVVM 319
L +GAA A++FS +GAAYGTA+SG G+A M VMRPE +MKSI+PVVM
Sbjct: 14 LGFIGAALALVFSCMGAAYGTARSGVGVAHMGVMRPELVMKSIVPVVM 61
>01_05_0664 +
24122958-24123070,24123184-24123261,24125040-24125210,
24125288-24125456
Length = 176
Score = 31.1 bits (67), Expect = 0.20
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 155 IQSMDLSLEVMGAASAIIFSSLGAAYGTAKSGTGIAAMAVMRPEQIMKSIIPVV 316
+Q + +G A +I S LGAA+G +G+ + A+ P K++I V+
Sbjct: 13 VQISPYTFSAIGIAVSIGVSVLGAAWGIFITGSSLIGAAIKAPRITSKNLISVI 66
>01_05_0399 -
21784997-21785284,21785450-21785603,21786444-21786687,
21786790-21787036
Length = 310
Score = 29.5 bits (63), Expect = 0.60
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +3
Query: 126 TPTFKKNGRKSNLWTFLWRLWGRR 197
+P F ++GR +L T+ W +W R
Sbjct: 200 SPIFNQHGRSIHLLTYAWNIWSNR 223
>08_02_1010 -
23538517-23538750,23539199-23539507,23539902-23540063,
23540521-23540710,23540881-23541059,23541155-23541298
Length = 405
Score = 28.3 bits (60), Expect = 1.4
Identities = 17/67 (25%), Positives = 29/67 (43%)
Frame = -2
Query: 282 GRITAMAAIPVPDLAVPYAAPRELKMMADAAPITSKERSIDWIFGHFS*MWEYFTGPKNS 103
G +TAM P + +AA K + +P +++ W+ + +GPK
Sbjct: 71 GLLTAMLTAPNENNRPLFAADELAKFYIEHSPSIFPQKN--WVLSKIAGTLRMVSGPKYD 128
Query: 102 DDYLHTL 82
YLH+L
Sbjct: 129 GKYLHSL 135
>04_04_0552 + 26195452-26195614,26195682-26195725,26198390-26199541
Length = 452
Score = 28.3 bits (60), Expect = 1.4
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +3
Query: 90 ADSHQSFWD-L*NTPTFKKNGRKSNLWTFLWRLWGRR 197
A S +W+ L NTP K G +S + +W +W R
Sbjct: 374 AQSVCQWWESLANTPNIPKKGLRSLILLVVWEIWKER 410
>10_08_0401 + 17629912-17630376
Length = 154
Score = 27.9 bits (59), Expect = 1.8
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 182 VMGAASAIIFSSLGAAYGTAKSGTGIAA 265
V GAA+ F++L AY A+ G+AA
Sbjct: 111 VAGAAAVAAFAALAVAYAVARRRVGVAA 138
>02_01_0202 +
1366149-1366594,1368444-1368444,1368616-1368743,
1368943-1369039
Length = 223
Score = 27.9 bits (59), Expect = 1.8
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +3
Query: 183 LWGRRLPSSSAPLVLHMAQPSQAPVLPPWR*CGLSRS 293
L GRR PS S +L + ++AP LPP C LS S
Sbjct: 91 LVGRRRPSRSLRCLLLLGTSTRAPFLPP---CHLSGS 124
>12_02_0842 - 23588826-23589198,23589548-23590203
Length = 342
Score = 27.1 bits (57), Expect = 3.2
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +3
Query: 228 HMAQPSQAPVLPPWR*CGLSRS*NPSFPLS 317
H + AP+LPPW S S +PS LS
Sbjct: 155 HHRRMMAAPILPPWMSSSPSSSSSPSVTLS 184
>07_01_0430 -
3277844-3277851,3277893-3278096,3278214-3278303,
3279048-3279179,3279220-3279403
Length = 205
Score = 27.1 bits (57), Expect = 3.2
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -2
Query: 285 SGRITAMAAIPVPDLAVPYAAP 220
SG+++AMA+ PVP A P P
Sbjct: 19 SGKVSAMASPPVPSSAAPRRRP 40
>05_03_0043 -
7702940-7703077,7703361-7703420,7703562-7703612,
7705355-7705408,7707260-7707325,7707552-7707629,
7708568-7708970,7710492-7710493,7711076-7711078
Length = 284
Score = 27.1 bits (57), Expect = 3.2
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -1
Query: 268 HGGNTGA*LGCAICSTKGAEDDGRR 194
H GNTGA A +GA DDG++
Sbjct: 223 HNGNTGAQQPAAQPEQQGANDDGKK 247
>04_01_0567 -
7263744-7263922,7264020-7264259,7264919-7264982,
7265088-7265393,7265652-7265866,7266195-7266489,
7266596-7266655,7267091-7267717,7268510-7268596,
7269292-7269612,7270051-7270224,7272806-7275022
Length = 1594
Score = 27.1 bits (57), Expect = 3.2
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = +1
Query: 52 FVCAK-VVSWSECVQIVIRVFGTC 120
F+CA VV WS + + + VFGTC
Sbjct: 553 FMCANTVVLWSGPLAMTVLVFGTC 576
>03_02_0308 -
7297228-7298008,7298495-7298576,7298612-7298669,
7298723-7298835,7298924-7299034,7299480-7299597,
7299706-7299809,7300570-7300665,7301806-7302307
Length = 654
Score = 27.1 bits (57), Expect = 3.2
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = -1
Query: 277 HHRHGGN---TGA*LGCAICSTKGAEDDGRRRPHNLQRK 170
HHRHGG+ + + G +T G++ DG R HN + K
Sbjct: 140 HHRHGGHHHRSDSVRGGGTGATAGSDKDG-REVHNKEEK 177
>03_01_0218 -
1717246-1717892,1717995-1718163,1718262-1720022,
1720531-1720610,1720854-1720981,1721004-1721012,
1723701-1723742,1725891-1726002,1726358-1726514,
1726678-1726762,1727628-1727713,1727998-1728042
Length = 1106
Score = 27.1 bits (57), Expect = 3.2
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +2
Query: 2 HEGHMTHSIESAKLGPYLSVLK*FRGVSVCR*SSEFLGPVKYSHIQEK 145
H+G M HS + A++ Y ++ F +S SSE+ P H QE+
Sbjct: 347 HKGSMKHSPKQAEVCAYDDSMELFGQLSKAISSSEWAKPQPREHPQEE 394
>06_03_0874 -
25580417-25580419,25580504-25580604,25580828-25581411,
25581523-25581594,25581667-25581793,25583412-25583516,
25583643-25583676
Length = 341
Score = 26.6 bits (56), Expect = 4.2
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -2
Query: 285 SGRITAMAAIPVPDLAVPYAAP 220
S T + +PVP AVPYAAP
Sbjct: 148 SAASTTHSVLPVPVPAVPYAAP 169
>03_01_0300 +
2350232-2352274,2352349-2352669,2352752-2352838,
2353031-2353708,2353800-2353964,2354139-2354433,
2354581-2354795,2354885-2355190,2355269-2355332,
2355426-2355665,2355783-2355886
Length = 1505
Score = 26.2 bits (55), Expect = 5.6
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +1
Query: 43 WAIFVCAKV--VSWSECVQIVIRVFGTCKIL 129
WA++ A V V WS + + + FGTC +L
Sbjct: 524 WALYSQAAVTFVFWSSPIFVAVITFGTCILL 554
>06_03_1505 +
30635572-30635802,30636977-30637135,30637217-30637328,
30638004-30638123,30638264-30638415,30638938-30638972,
30639077-30639233,30639328-30639381,30639502-30639594,
30639685-30639827,30639939-30640009,30640323-30640453
Length = 485
Score = 25.8 bits (54), Expect = 7.4
Identities = 11/30 (36%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Frame = +3
Query: 174 LWRLWGRRLPSSSAPLVLHM-AQPSQAPVL 260
LW LW + P P +HM QP P++
Sbjct: 455 LWNLWSKGEPERVCPHHMHMQPQPKTPPLV 484
>10_08_0841 -
20948719-20948919,20949624-20950388,20950475-20951023,
20951097-20951237,20951313-20951519,20951556-20951724,
20951899-20952003,20952087-20952208,20952291-20952412,
20953234-20953516
Length = 887
Score = 25.4 bits (53), Expect = 9.7
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -2
Query: 285 SGRITAMAAIPVPDLAVPYAAPRELK 208
SGR TA AA P P+ V A P + K
Sbjct: 25 SGRATAAAAAPAPENKVFVALPAQHK 50
>07_01_0362 -
2667031-2667090,2667182-2667426,2667749-2669471,
2669578-2669921,2670544-2670667,2671350-2671599,
2672486-2672571
Length = 943
Score = 25.4 bits (53), Expect = 9.7
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = -2
Query: 255 PVPDLAVPYAAPRELKMMADAAPITSKERSIDWIFG 148
P P A P A P A + P + SIDW+ G
Sbjct: 15 PPPRSASPPATPVASSAGASSPPAQTNAASIDWLGG 50
>01_06_1805 -
39999987-40000169,40000648-40000974,40001724-40002017,
40002112-40002231,40002714-40002776,40003150-40003310,
40003864-40004035
Length = 439
Score = 25.4 bits (53), Expect = 9.7
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = -2
Query: 276 ITAMAAIPVPDLAVPYAAPRELKMMADAAPITSKERSIDWIFGHFS*MWEYFT 118
+TA AA P P L P P ++ A AA ++G MW+ T
Sbjct: 15 VTASAAAPTPPLPPPPPPPPPSQLPATAAATDEPSHDPAALYGEG--MWQQMT 65
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,582,429
Number of Sequences: 37544
Number of extensions: 227396
Number of successful extensions: 694
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 684
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 694
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 398975940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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